EY650120

Overview
NameEY650120
Unique NameEY650120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 3
Query:  543 HSRRPP-TPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            H + PP TPLL+ + +P  ++ +   +L QLA+ELR+++I  VS+TGGHLG+ LGV+ELTVA   +     DR+  DV H
Sbjct:   13 HLKSPPETPLLNRVRFPSDLKQIPEEDLPQLAEELRAEMIDAVSQTGGHLGAGLGVVELTVALHYIFDTPHDRLIWDVGH 92          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_LARHH (1-deoxy-D-xylulose-5-phosphate synthase OS=Laribacter hongkongensis (strain HLHK9) GN=dxs PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 48/116 (41.38%), Postives = 62/116 (53.45%), Query Frame = 3
Query:  561 TPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHTTLIK-SDWEKGXMRTMMQH--MASLITKGLKWIDXFGPGQS 896
            TPLLDTI  P  +R L  ++L QLA ELR  ++ +VS+TGGH  S LG IELT+A   + +   DR+  DV H T   K     +  M TM Q   +A    +     D FG G S
Sbjct:    4 TPLLDTIQIPADLRELDRKQLPQLARELRDFLVDSVSQTGGHFASNLGSIELTIALHYVYNTPDDRLVWDVGHQTYPHKILTGRRDRMHTMRQKGGLAGFPKRDESEYDTFGVGHS 119          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRASO (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain ORS278) GN=dxs PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 3
Query:  561 TPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            TPLLDTI  P  +R L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A   +    +DR+  DV H
Sbjct:    7 TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGH 79          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRASB (1-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=dxs PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 3
Query:  561 TPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            TPLLDTI  P  +R L + +++Q+ADELR + I  VS TGGH G+ LGV+ELT A   +    +DR+  DV H
Sbjct:    7 TPLLDTIKTPEDLRRLKVEQVRQVADELRQETIDAVSVTGGHFGAGLGVVELTTAIHYVFDTPRDRLIWDVGH 79          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 52/118 (44.07%), Postives = 70/118 (59.32%), Query Frame = 3
Query:  561 TPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHT---TLIKSDWEKGXMRTMMQHMA-SLITKGLKWI-DXFGPGQS 896
            TPLLD + +P  +R L    L QLA+ELR++ I  VS TGGHLG+ LGV+ELTVA   + +  +DRI  DV H T    ++    EK  +RT+ Q    S  TK ++ + D FG G S
Sbjct:    6 TPLLDRVCFPQDLRALPESYLVQLANELRTETIDAVSVTGGHLGAGLGVVELTVALHYIFNTPEDRIIWDVGHQTYPHKILTGRREK--IRTLRQEGGLSGFTKRVESVYDPFGAGHS 121          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_AZOSE (1-deoxy-D-xylulose-5-phosphate synthase OS=Azoarcus sp. (strain EbN1) GN=dxs PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 3
Query:  555 PPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHT 782
            PP PLL  I+ P  +R L  REL  LA ELR+ +I +VSKTGGHL S LG +EL++A   +    +DRI  DV H T
Sbjct:    2 PPYPLLHRIDSPFDLRKLDRRELPALAAELRAFLIESVSKTGGHLSSNLGTVELSIALHYIFDTPEDRIVWDVGHQT 78          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_PSEU5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas stutzeri (strain A1501) GN=dxs PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.952e-11
Identity = 45/120 (37.50%), Postives = 64/120 (53.33%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH----HTTLIKSDWEKGXMRTMMQHMASLITKGLKWIDXFGPGQS 896
            RP TP+LD    P  +R L   EL++LA+ELR +++++V +TGGH G+ LGVIELT+A   +     DR+  DV H    H  L       G +R     +A+   +     D FG G S
Sbjct:   12 RPATPVLDRAATPEQLRRLGEAELEELANELRQELLYSVGRTGGHFGAGLGVIELTIALHYVYDTPDDRLVWDVGHQAYPHKILTGRRERMGTLR-QKDGLAAFPRRVESEYDTFGVGHS 130          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_POLNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=dxs PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.952e-11
Identity = 39/73 (53.42%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  567 LLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHT 782
            LL+TIN P  +R L   +LK LADELR+ VI +VS+TGGHL S LG +ELTVA   + +   DR+  DV H T
Sbjct:    4 LLETINSPADLRRLPRAQLKALADELRAYVIDSVSQTGGHLSSNLGTVELTVALHYVFNTPDDRLVWDVGHQT 76          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_HAHCH (1-deoxy-D-xylulose-5-phosphate synthase OS=Hahella chejuensis (strain KCTC 2396) GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            RP TPLLD I+ P  +R L+  EL QLA ELR+ ++++V ++GGH G+ LGV+ELTVA     +  +DR+  DV H
Sbjct:   14 RPNTPLLDKIDSPAQLRLLNEAELLQLAHELRAFLLYSVGQSGGHFGAGLGVVELTVALHYAFNTPEDRLVWDVGH 89          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_DIAST (1-deoxy-D-xylulose-5-phosphate synthase OS=Diaphorobacter sp. (strain TPSY) GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 3
Query:  564 PLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHT 782
            PLL+ +N P  +R L   ELK LA ELR+ V+ +VSKTGGHL S LG +ELTVA   +    +DR+  DV H T
Sbjct:    7 PLLERVNDPADLRRLPRAELKALATELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFDTPRDRLVWDVGHQT 80          
The following BLAST results are available for this feature:
BLAST of EY650120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DXS_MESSB1.494e-1146.251-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhi... [more]
DXS_LARHH1.494e-1141.381-deoxy-D-xylulose-5-phosphate synthase OS=Laribac... [more]
DXS_BRASO1.494e-1149.321-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrh... [more]
DXS_BRASB1.494e-1149.321-deoxy-D-xylulose-5-phosphate synthase OS=Bradyrh... [more]
DXS_BART11.494e-1144.071-deoxy-D-xylulose-5-phosphate synthase OS=Bartone... [more]
DXS_AZOSE1.494e-1150.651-deoxy-D-xylulose-5-phosphate synthase OS=Azoarcu... [more]
DXS_PSEU51.952e-1137.501-deoxy-D-xylulose-5-phosphate synthase OS=Pseudom... [more]
DXS_POLNA1.952e-1153.421-deoxy-D-xylulose-5-phosphate synthase OS=Polarom... [more]
DXS_HAHCH2.549e-1148.681-deoxy-D-xylulose-5-phosphate synthase OS=Hahella... [more]
DXS_DIAST2.549e-1151.351-deoxy-D-xylulose-5-phosphate synthase OS=Diaphor... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-D11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650120 ID=EY650120; Name=EY650120; organism=Citrus sinensis; type=EST; length=897bp
CGATCAATCACAATCTACAAATTTGGGGGGTGGGGTGTAGAGCTTCATGC
CTTTAACAGACCCACTAAATTTGCCTTAAGCATTATCAACCACAAACACG
CGTTCGGATTACTTCCTTCATTCGTTTATTATATTTTTTTAATATATTCA
ATATTTATATTCAACCTACTTCACTTCAGTGGCATCCAGCACGCAGGAAG
CACTGAATACATTCACTGTGAGAAGATGACTGACCAGTCGCGAGTGTCTT
TAATTATATACTGATTTGCCGGAGTTAGCATATTATTCTTCACTCACTGC
GTGATGTTTTCTTTTCTGGGGTGTTCTATGCAATACCTGGTATGGCTCTC
TCCGCATTCTCATTCCCGACTTATGTCAGCAAAGCAACAGATTCGGGTCC
CCACAAATCTTCTCCTGTTACTTCTCATTTCTTTGGAGCAGCTCTTTTTT
CCCATTTGTCACACAAGCTCGACAATCATCAGATACAGCTCAAGAAAAGG
CCAAATGGGGTTTGTGCATCACTTTCAGAAAGAGGAGAGTATCACTCACG
AAGACCACCGACACCTCTCTTGGACACCATAAACTATCCAATTCACATGA
GAAATCTATCCATCAGGGAGCTGAAACAACTGGCAGATGAGTTGCGGTCC
GATGTCATATTCAATGTTTCNAAAACCGGGGGTCACTTGGGCTCAACTCT
TGGTGTGATTGAGCTTACCGTGGCCTTCATTATGTTGTCATGCTCCAAAG
ACCGGATCTGNGAGGATGTCNGTCATCACACTACCCTCATAAAATCTGAC
TGGGAGAAGGGATANATGCGTACCATGATGCAACATATGGCCTCTCTGAT
CACTAAAGGGCTGAAATGGATTGATNGCTTTGGACCGGGCCAGTCTA
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