EY650120

Overview
NameEY650120
Unique NameEY650120
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRUSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            RP TPLLD    P  +R L  ++L QLA+ELR+++I  VS TGGHLG+ LGV+ELTVA   + +   DRI  DV H
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGH 78          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRUSI (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            RP TPLLD    P  +R L  ++L QLA+ELR+++I  VS TGGHLG+ LGV+ELTVA   + +   DRI  DV H
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGH 78          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRUME (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            RP TPLLD    P  +R L  ++L QLA+ELR+++I  VS TGGHLG+ LGV+ELTVA   + +   DRI  DV H
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGH 78          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRUMB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            RP TPLLD    P  +R L  ++L QLA+ELR+++I  VS TGGHLG+ LGV+ELTVA   + +   DRI  DV H
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGH 78          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRUC2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            RP TPLLD    P  +R L  ++L QLA+ELR+++I  VS TGGHLG+ LGV+ELTVA   + +   DRI  DV H
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGH 78          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRUAB (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            RP TPLLD    P  +R L  ++L QLA+ELR+++I  VS TGGHLG+ LGV+ELTVA   + +   DRI  DV H
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGH 78          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRUA2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain 2308) GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            RP TPLLD    P  +R L  ++L QLA+ELR+++I  VS TGGHLG+ LGV+ELTVA   + +   DRI  DV H
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGH 78          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_BRUA1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella abortus (strain S19) GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 40/76 (52.63%), Postives = 51/76 (67.11%), Query Frame = 3
Query:  552 RPPTPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            RP TPLLD    P  +R L  ++L QLA+ELR+++I  VS TGGHLG+ LGV+ELTVA   + +   DRI  DV H
Sbjct:    3 RPSTPLLDKAPTPDRLRALPEQDLPQLAEELRTELIDAVSTTGGHLGAGLGVVELTVALHHVFNTPYDRIIWDVGH 78          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS_ACISJ (1-deoxy-D-xylulose-5-phosphate synthase OS=Acidovorax sp. (strain JS42) GN=dxs PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 3
Query:  564 PLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXHHT 782
            PLL+ +N P  +R L   ELK LA ELR+ V+ +VSKTGGHL S LG +ELTVA   +    +DR+  DV H T
Sbjct:    7 PLLERVNDPADLRRLPRAELKTLAHELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFDTPRDRLVWDVGHQT 80          
BLAST of EY650120 vs. ExPASy Swiss-Prot
Match: DXS1_ROSDO (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=dxs1 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.549e-11
Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 3
Query:  561 TPLLDTINYPIHMRNLSIRELKQLADELRSDVIFNVSKTGGHLGSTLGVIELTVAF-IMLSCSKDRIXEDVXH 776
            TP LD +  P  +R++S  EL+ +ADELR++V+  VS+TGGHLGS+LGV+EL+VA   +    +D++  DV H
Sbjct:    6 TPTLDRVAGPADLRSMSDTELRNVADELRAEVVEAVSQTGGHLGSSLGVVELSVAIHAVFDTPRDKLVWDVGH 78          
The following BLAST results are available for this feature:
BLAST of EY650120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
DXS_BRUSU2.549e-1152.631-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUSI2.549e-1152.631-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUME2.549e-1152.631-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUMB2.549e-1152.631-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUC22.549e-1152.631-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUAB2.549e-1152.631-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUA22.549e-1152.631-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_BRUA12.549e-1152.631-deoxy-D-xylulose-5-phosphate synthase OS=Brucell... [more]
DXS_ACISJ2.549e-1151.351-deoxy-D-xylulose-5-phosphate synthase OS=Acidovo... [more]
DXS1_ROSDO2.549e-1147.951-deoxy-D-xylulose-5-phosphate synthase 1 OS=Roseo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-D11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650120 ID=EY650120; Name=EY650120; organism=Citrus sinensis; type=EST; length=897bp
CGATCAATCACAATCTACAAATTTGGGGGGTGGGGTGTAGAGCTTCATGC
CTTTAACAGACCCACTAAATTTGCCTTAAGCATTATCAACCACAAACACG
CGTTCGGATTACTTCCTTCATTCGTTTATTATATTTTTTTAATATATTCA
ATATTTATATTCAACCTACTTCACTTCAGTGGCATCCAGCACGCAGGAAG
CACTGAATACATTCACTGTGAGAAGATGACTGACCAGTCGCGAGTGTCTT
TAATTATATACTGATTTGCCGGAGTTAGCATATTATTCTTCACTCACTGC
GTGATGTTTTCTTTTCTGGGGTGTTCTATGCAATACCTGGTATGGCTCTC
TCCGCATTCTCATTCCCGACTTATGTCAGCAAAGCAACAGATTCGGGTCC
CCACAAATCTTCTCCTGTTACTTCTCATTTCTTTGGAGCAGCTCTTTTTT
CCCATTTGTCACACAAGCTCGACAATCATCAGATACAGCTCAAGAAAAGG
CCAAATGGGGTTTGTGCATCACTTTCAGAAAGAGGAGAGTATCACTCACG
AAGACCACCGACACCTCTCTTGGACACCATAAACTATCCAATTCACATGA
GAAATCTATCCATCAGGGAGCTGAAACAACTGGCAGATGAGTTGCGGTCC
GATGTCATATTCAATGTTTCNAAAACCGGGGGTCACTTGGGCTCAACTCT
TGGTGTGATTGAGCTTACCGTGGCCTTCATTATGTTGTCATGCTCCAAAG
ACCGGATCTGNGAGGATGTCNGTCATCACACTACCCTCATAAAATCTGAC
TGGGAGAAGGGATANATGCGTACCATGATGCAACATATGGCCTCTCTGAT
CACTAAAGGGCTGAAATGGATTGATNGCTTTGGACCGGGCCAGTCTA
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