EY702924

Overview
NameEY702924
Unique NameEY702924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702924_ssr107 microsatellite EY702924_ssr107:107..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3677 contig Csv1_Contig3677:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_RAT (NADP-dependent malic enzyme OS=Rattus norvegicus GN=Me1 PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 2.080e-21
Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            GY L RDPH NK LAF+ +ER    + GLLPP +++QE+QV +++ N  +      +Y+ +MDLQ+RN+KL   +L+ N E   PIVYTPT G ACQ+Y   +R
Sbjct:   15 GYLLTRDPHLNKDLAFTLEERQQLKIHGLLPPCIVNQEIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYSVLMSNVEKFMPIVYTPTVGLACQQYSLAFR 118          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.124e-20
Identity = 48/104 (46.15%), Postives = 68/104 (65.38%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            GY +LRDPH NKG+AF+ +ER    + GLLPP  + Q++QV  ++ N  +    L +Y+ +M LQ+RN+KL   +L  + E   PIVYTPT G ACQ+YG  +R
Sbjct:    4 GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDVQVFSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQQYGLAFR 107          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_HUMAN (NADP-dependent malic enzyme OS=Homo sapiens GN=ME1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.740e-20
Identity = 49/104 (47.12%), Postives = 67/104 (64.42%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            GY L R+PH NK LAF+ +ER    + GLLPP+  SQE+QV ++V N         +Y+ +MDLQ+RN+KL   +L  + E   PIVYTPT G ACQ+Y  ++R
Sbjct:   15 GYLLTRNPHLNKDLAFTLEERQQLNIHGLLPPSFNSQEIQVLRVVKNFEHLNSDFDRYLLLMDLQDRNEKLFYRVLTSDIEKFMPIVYTPTVGLACQQYSLVFR 118          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.141e-19
Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            GY +LRDPH NKG+AF+ +ER    + GLLPP  + Q+ QV  ++ N  +    L +Y+ +M LQ+RN+KL   +L  + E   PIVYTPT G ACQ YG  +R
Sbjct:    4 GYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLTSDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFR 107          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.491e-19
Identity = 48/104 (46.15%), Postives = 67/104 (64.42%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            GY L R PH NK LAF+ +ER    + GLLPP  ISQ++QV +++ N  +      +Y+ +MDLQ+RN+KL   +L+ + E   PIVYTPT G ACQ+Y   +R
Sbjct:    1 GYGLTRIPHLNKDLAFTLEERQQLNIHGLLPPCFISQDIQVLRVIKNFERLNSDFDRYLLLMDLQDRNEKLFYKVLMSDIEKFMPIVYTPTVGLACQQYSLAFR 104          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOM_HUMAN (NAD-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME2 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.665e-19
Identity = 47/104 (45.19%), Postives = 70/104 (67.31%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            G  L+ +P  NKG+AF+ +ER    L+GLLPP + +Q++Q  +   N+++   PL+KY+ +M +QERN+KL   +L D+ E   PIVYTPT G AC +YG I+R
Sbjct:   25 GKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACSQYGHIFR 128          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAOM_MOUSE (NAD-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.262e-18
Identity = 47/104 (45.19%), Postives = 70/104 (67.31%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            G  L+ +P  NKG+AF+ +ER    L+GLLPP + +Q++Q  +   N+++   PL+KY+ +M +QERN+KL   +L D+ E   PIVYTPT G AC +YG I+R
Sbjct:   25 GKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFR 128          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.648e-18
Identity = 46/104 (44.23%), Postives = 68/104 (65.38%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            GY + R+PH NKG+AF+ +ER    + GL+PP  +SQ++Q+ +++    + Q  L KY+ +M LQ+RN+KL   +L  + E   PIVYTPT G ACQ YG  +R
Sbjct:   50 GYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYERQQSDLDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFR 153          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.395e-17
Identity = 45/104 (43.27%), Postives = 66/104 (63.46%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            GY + R+PH NKG+AF+ +ER    + GL+PP  +SQ++Q+ +++      Q  L KY+ +M  Q+RN+KL   +L  + E   PIVYTPT G ACQ YG  +R
Sbjct:   50 GYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIMRYYENQQSDLDKYIILMTHQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFR 153          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_IDILO (NAD-dependent malic enzyme OS=Idiomarina loihiensis GN=sfcA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.302e-17
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            SG +LL  P  NKG AFS++ER +  L GLLPP   S E Q ++     R ++ P+ K++ +  +Q+ N+ L   LL D+ E   PI+YTPT G+AC+K+  IYRS
Sbjct:   13 SGPNLLETPLLNKGSAFSKEERAAFNLTGLLPPRYESIEEQAERAYMQYRSFETPINKHIYLRAIQDNNETLFYRLLTDHLEEMMPIIYTPTVGDACEKFSDIYRS 118          
The following BLAST results are available for this feature:
BLAST of EY702924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MAOX_RAT2.080e-2147.12NADP-dependent malic enzyme OS=Rattus norvegicus G... [more]
MAOX_ANAPL5.124e-2046.15NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOX_HUMAN8.740e-2047.12NADP-dependent malic enzyme OS=Homo sapiens GN=ME1... [more]
MAOX_COLLI1.141e-1946.15NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOX_PIG1.491e-1946.15NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]
MAOM_HUMAN5.665e-1945.19NAD-dependent malic enzyme, mitochondrial OS=Homo ... [more]
MAOM_MOUSE1.262e-1845.19NAD-dependent malic enzyme, mitochondrial OS=Mus m... [more]
MAON_HUMAN1.648e-1844.23NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAON_MOUSE1.395e-1743.27NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAO1_IDILO5.302e-1743.40NAD-dependent malic enzyme OS=Idiomarina loihiensi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702924 ID=EY702924; Name=EY702924; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTTTCTTCTGATCTCTTCTTTCTCTTTCTCCGATTTTCTC
TCCGTGTGCTGAAGAAACCAAACAGAAGAGAGAGAAAAAGGGAAAGAGGG
AAGAAGGAGAGAGAGAGCAAAGCTTTAAGACTTCAAAGCCAAAGCTCTGA
TAAGAAGACCCGAAAGACTCTCCCTTCTCTTCTCATTGCCTCTGCAACTT
TTTTTCTATTTTTACTTCGTCACACATTTTTAATCAGCGCAAGACTCTCT
CTTCACACATTTCTCTCGCCATGTTTTCGTTAAACAGAAGCGCTTTTCTG
AATAATCCTGCGAGCATATCAGGCTCGTTCCCTGATAAGCATAGAAGAAT
ACTGCCTACAAGAGTGGTGGTTGCGGGCTCGTCTAACAGAGATAAGAGTA
ACGGCAGTCTTTTAATGGCAACCGATGAAAGCACAGCTACATTAAAAGAA
ATGAGAGATGGCTATGCCGAAGTTGTGGACCCCAAGTCCGGCGTCAGCGG
TGGGGTCCAGGACGTTTATGGTGAGGATACCGCCACCGAAGACCAGCCTG
TCACCCCTTGGTCTGTCTCAGTTGCTAGTGGGTATTCTTTGTTGAGAGAT
CCACACCACAACAAAGGGCTTGCCTTCTCTGAAAAAGAAAGGAATTCACA
TTACTTGCGTGGTCTTCTCCCCCCTACAGTTATATCCCAAGAGCTCCAGG
TGAAGAAAATGGTGCATAATATTCGGCAGTACCAAGTTCCACTCCAGAAG
TACATGGCCATGATGGATCTTCAGGAGAGAAATCAGAAACTGGNTCTATA
GCTTCTCATTGACAATGGTGAGGGAGGTACTCCCATTGTCTATACTCCAA
CTGGGGGAGAAGCTTGCCAGAAGTACGGGAGCATCTATAGGTCG
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