EY702924 | Citrus Genome Database

Overview


Name	EY702924
Unique Name	EY702924
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	894

Libraries


Library Name	Type
Sweet orange fruit, development stadium (2 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO12_VIBVY (NAD-dependent malic enzyme 2 OS=Vibrio vulnificus (strain YJ016) GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.067e-13
Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AF+ +ER +  L GLLP  + + + QV +       +   ++K++ + ++Q+ N+ L   L+  + E   PI+YTPT GEACQK+  IYR
Sbjct:   10 AGNTLLNTPLLNKGSAFTLEERKNFNLIGLLPANIETIDEQVSRAYEQFSLFNSAMEKHIYLRNIQDTNETLYFRLINQHIEEMMPIIYTPTVGEACQKFSQIYR 114

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PSYIN (NAD-dependent malic enzyme OS=Psychromonas ingrahamii (strain 37) GN=sfcA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 38/105 (36.19%), Postives = 64/105 (60.95%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS++ERN+  L GLLP  + + E Q  +    +  ++  L K++ + ++Q+ N+ L   L+ ++ E   P++YTPT G AC+++  IYR
Sbjct:   12 AGPALLESPLLNKGSAFSQEERNNFNLTGLLPHNIETIESQSTRAYQQLSSFKSDLDKHIYLRNIQDTNETLFHHLIENHLEEVMPLIYTPTVGLACEQFSKIYR 116

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PSEU2 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sfcA PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            +G SLL  P  NKG AF+ +ER    L GLLP  V + E QV ++    +Q    L K++ +  +Q+ N+ L   LL  + +   PI+YTPT G+ACQ++  IYR+
Sbjct:   13 AGPSLLEMPLLNKGSAFTPQERVEFNLIGLLPQNVETIEEQVTRVYSQYKQCASDLDKHIYLRSIQDNNETLFFRLLDSHLDEMLPIIYTPTVGQACQEFSKIYRT 118

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PSESM (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. tomato GN=sfcA PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            +G SLL  P  NKG AF+ +ER    L GLLP  V + E QV ++    +Q    L K++ +  +Q+ N+ L   LL  + +   PI+YTPT G+ACQ++  IYR+
Sbjct:   13 AGPSLLEMPLLNKGSAFTPQERIEFNLIGLLPQNVETIEEQVTRVYSQYKQCASDLDKHIYLRSIQDNNETLFFRLLDSHLDEMLPIIYTPTVGQACQEFSKIYRT 118

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PSE14 (NAD-dependent malic enzyme OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=sfcA PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.035e-12
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            +G SLL  P  NKG AF+ +ER    L GLLP  V + E QV ++    +Q    L K++ +  +Q+ N+ L   LL  + +   PI+YTPT G+ACQ++  IYR+
Sbjct:   13 AGPSLLEMPLLNKGSAFTPQERVEFNLIGLLPQNVETIEEQVTRVYSQYKQCASDLDKHIYLRSIQDNNETLFFRLLDSHLDEMLPIIYTPTVGQACQEFSKIYRT 118

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_VIBHB (NAD-dependent malic enzyme OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 38/105 (36.19%), Postives = 64/105 (60.95%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS +ER+S  L GLLP T  + + QV++     + ++  + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALLATPLLNKGSAFSGEERSSFNLEGLLPETTETIQEQVERAYQQYKSFESDMDKHIYLRNIQDTNETLYYRLVQNHISEMMPIIYTPTVGAACENFSNIYR 117

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_VIBPA (NAD-dependent malic enzyme OS=Vibrio parahaemolyticus GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 37/105 (35.24%), Postives = 64/105 (60.95%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +L+  P  NKG AFS +ER+S  L GLLP T  + + QV++     + ++  + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALMATPLLNKGSAFSAEERSSFNLEGLLPETTETIQEQVERAYQQYKSFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYR 117

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_EDWI9 (NAD-dependent malic enzyme OS=Edwardsiella ictaluri (strain 93-146) GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFSE+ERN+  L GLLP  + + E QV++       +    ++++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFSEEERNTFNLNGLLPEAIETIEEQVERAYRQFCDFHSATEQHIYLRNIQDTNETLFYRLLRSHLSEMMPIIYTPTVGEACEHFSYIYR 120

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SERP5 (NAD-dependent malic enzyme OS=Serratia proteamaculans (strain 568) GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.305e-12
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+E+ERN   L+GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERNHFNLQGLLPDAVETIEEQAERAYRQYQDFKNDSDKHIYLRNIQDTNETLFYRLLDSHLSEMMPIIYTPTVGEACEHFSDIYR 120

[Close]

BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAE (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.305e-12
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 1

Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            +G SLL  P  NKG AFS +ER    L+GLLP  + + E Q ++           L +++ +  +Q+ N+ L   LL ++ E   PI+YTPT G+ACQ++  IYR+
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRT 119

The following BLAST results are available for this feature:

BLAST of EY702924 vs. ExPASy Swiss-Prot

BLAST of EY702924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96


Match Name	E-value	Identity	Description
MAO12_VIBVY	6.067e-13	37.14	NAD-dependent malic enzyme 2 OS=Vibrio vulnificus ...	[more]
MAO1_PSYIN	1.035e-12	36.19	NAD-dependent malic enzyme OS=Psychromonas ingraha...	[more]
MAO1_PSEU2	1.035e-12	39.62	NAD-dependent malic enzyme OS=Pseudomonas syringae...	[more]
MAO1_PSESM	1.035e-12	39.62	NAD-dependent malic enzyme OS=Pseudomonas syringae...	[more]
MAO1_PSE14	1.035e-12	39.62	NAD-dependent malic enzyme OS=Pseudomonas syringae...	[more]
MAO1_VIBHB	1.351e-12	36.19	NAD-dependent malic enzyme OS=Vibrio harveyi (stra...	[more]
MAO1_VIBPA	1.765e-12	35.24	NAD-dependent malic enzyme OS=Vibrio parahaemolyti...	[more]
MAO1_EDWI9	1.765e-12	38.10	NAD-dependent malic enzyme OS=Edwardsiella ictalur...	[more]
MAO1_SERP5	2.305e-12	38.10	NAD-dependent malic enzyme OS=Serratia proteamacul...	[more]
MAO1_PSEAE	2.305e-12	37.74	NAD-dependent malic enzyme OS=Pseudomonas aerugino...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-701-013-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY702924 ID=EY702924; Name=EY702924; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTTTCTTCTGATCTCTTCTTTCTCTTTCTCCGATTTTCTC
TCCGTGTGCTGAAGAAACCAAACAGAAGAGAGAGAAAAAGGGAAAGAGGG
AAGAAGGAGAGAGAGAGCAAAGCTTTAAGACTTCAAAGCCAAAGCTCTGA
TAAGAAGACCCGAAAGACTCTCCCTTCTCTTCTCATTGCCTCTGCAACTT
TTTTTCTATTTTTACTTCGTCACACATTTTTAATCAGCGCAAGACTCTCT
CTTCACACATTTCTCTCGCCATGTTTTCGTTAAACAGAAGCGCTTTTCTG
AATAATCCTGCGAGCATATCAGGCTCGTTCCCTGATAAGCATAGAAGAAT
ACTGCCTACAAGAGTGGTGGTTGCGGGCTCGTCTAACAGAGATAAGAGTA
ACGGCAGTCTTTTAATGGCAACCGATGAAAGCACAGCTACATTAAAAGAA
ATGAGAGATGGCTATGCCGAAGTTGTGGACCCCAAGTCCGGCGTCAGCGG
TGGGGTCCAGGACGTTTATGGTGAGGATACCGCCACCGAAGACCAGCCTG
TCACCCCTTGGTCTGTCTCAGTTGCTAGTGGGTATTCTTTGTTGAGAGAT
CCACACCACAACAAAGGGCTTGCCTTCTCTGAAAAAGAAAGGAATTCACA
TTACTTGCGTGGTCTTCTCCCCCCTACAGTTATATCCCAAGAGCTCCAGG
TGAAGAAAATGGTGCATAATATTCGGCAGTACCAAGTTCCACTCCAGAAG
TACATGGCCATGATGGATCTTCAGGAGAGAAATCAGAAACTGGNTCTATA
GCTTCTCATTGACAATGGTGAGGGAGGTACTCCCATTGTCTATACTCCAA
CTGGGGGAGAAGCTTGCCAGAAGTACGGGAGCATCTATAGGTCG