EY702924

Overview
NameEY702924
Unique NameEY702924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702924_ssr107 microsatellite EY702924_ssr107:107..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3677 contig Csv1_Contig3677:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PSEAB (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.305e-12
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            +G SLL  P  NKG AFS +ER    L+GLLP  + + E Q ++           L +++ +  +Q+ N+ L   LL ++ E   PI+YTPT G+ACQ++  IYR+
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRT 119          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA8 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain LESB58) GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.305e-12
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            +G SLL  P  NKG AFS +ER    L+GLLP  + + E Q ++           L +++ +  +Q+ N+ L   LL ++ E   PI+YTPT G+ACQ++  IYR+
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMMPIIYTPTVGQACQEFSKIYRT 119          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PSEA7 (NAD-dependent malic enzyme OS=Pseudomonas aeruginosa (strain PA7) GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.305e-12
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            +G SLL  P  NKG AFS +ER    L+GLLP  + + E Q ++           L +++ +  +Q+ N+ L   LL ++ E   PI+YTPT G+ACQ++  IYR+
Sbjct:   14 AGPSLLEMPLLNKGSAFSTQERIDFNLQGLLPHNIETIEEQTERAYSQYNLCNTDLDRHIFLRSIQDNNETLFFRLLEEHLEEMLPIIYTPTVGQACQEFSKIYRT 119          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_ERWT9 (NAD-dependent malic enzyme OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=sfcA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.305e-12
Identity = 42/105 (40.00%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ERN   L GLLP TV S E Q ++     + ++    K++ + ++Q+ N+ L   LL ++ E   PI+YTPT G AC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFSIEERNDFNLNGLLPETVESIEEQAERAWRQFQDFKNNNDKHVYLRNIQDTNETLFYRLLDNHLEEMMPIIYTPTVGAACEHFSEIYR 120          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_BDEBA (NAD-dependent malic enzyme OS=Bdellovibrio bacteriovorus GN=sfcA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12
Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 1
Query:  556 PWSVSVASGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYRS 894
            P+S +V    SLL     NKG AFSE+ER    L GL+P T+ + E Q +++    R  +  + K++ + +LQ+ N+ L   L++++     PI+YTP  GEAC+ +  IYR+
Sbjct:   14 PYSGTVLLEMSLL-----NKGSAFSEEERTHLNLHGLVPQTIETIEEQAERVYSQYRLLKADIDKHVYLRNLQDTNETLFYHLVVNHLTEMMPIIYTPVVGEACEHFSEIYRA 121          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PROMH (NAD-dependent malic enzyme OS=Proteus mirabilis (strain HI4320) GN=sfcA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFSE+ER++  L GLLP  V + E QV++       ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFSEEERSTFNLHGLLPEAVETIEEQVERAYRQYLDFKNDNDKHIYLRNIQDTNETLFYRLLESHLTEMMPIIYTPTVGEACEHFSDIYR 120          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PECCP (NAD-dependent malic enzyme OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 39/105 (37.14%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+E+ER +  L GLLP  V + E Q ++     ++++  ++K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERANFNLHGLLPEAVETIEEQAERAWRQYQEFKHDIEKHVYLRNIQDTNETLFYRLLDGHLSEMMPIIYTPTVGEACEHFSDIYR 120          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_ENTS8 (NAD-dependent malic enzyme OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sfcA PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ER++  L GLLP  V + E Q ++       ++  + K++ + ++Q+ N+ L   LL ++ E   PI+YTPT G AC+++  IYR
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERSNFNLLGLLPEVVETIEEQAERAWRQFEDFKTDIDKHIYLRNIQDTNETLFYRLLENHLEVMMPIIYTPTVGSACERFSEIYR 120          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_AERS4 (NAD-dependent malic enzyme OS=Aeromonas salmonicida (strain A449) GN=sfcA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 37/105 (35.24%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AF+ +ER+S  L GLLP  + + E Q ++       +   L K++ + ++Q+ N+ L   LL ++     P++YTPT G+AC+++ +IYR
Sbjct:   16 AGPALLETPLLNKGCAFTSEERSSFNLEGLLPQNIETIEEQAERAYRQFMAFGNDLDKHIYLRNIQDTNETLFYRLLHNHLTEMLPVIYTPTVGKACEEFSNIYR 120          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SODGM (NAD-dependent malic enzyme OS=Sodalis glossinidius (strain morsitans) GN=sfcA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 38/105 (36.19%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ER++  L+GLLP TV + E Q ++     + ++  + +++ + ++Q+ N+ L   LL  +     PI+YTPT G+AC+++  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFSLEERDNFNLQGLLPDTVETIEEQAERAWRQYQDFRTNIDRHIYLRNIQDTNETLFYRLLAAHLAEMLPIIYTPTVGDACERFSDIYR 120          
The following BLAST results are available for this feature:
BLAST of EY702924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MAO1_PSEAB2.305e-1237.74NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA82.305e-1237.74NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_PSEA72.305e-1237.74NAD-dependent malic enzyme OS=Pseudomonas aerugino... [more]
MAO1_ERWT92.305e-1240.00NAD-dependent malic enzyme OS=Erwinia tasmaniensis... [more]
MAO1_BDEBA3.011e-1236.28NAD-dependent malic enzyme OS=Bdellovibrio bacteri... [more]
MAO1_PROMH3.932e-1239.05NAD-dependent malic enzyme OS=Proteus mirabilis (s... [more]
MAO1_PECCP3.932e-1237.14NAD-dependent malic enzyme OS=Pectobacterium carot... [more]
MAO1_ENTS83.932e-1237.14NAD-dependent malic enzyme OS=Enterobacter sakazak... [more]
MAO1_AERS43.932e-1235.24NAD-dependent malic enzyme OS=Aeromonas salmonicid... [more]
MAO1_SODGM5.136e-1236.19NAD-dependent malic enzyme OS=Sodalis glossinidius... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702924 ID=EY702924; Name=EY702924; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTTTCTTCTGATCTCTTCTTTCTCTTTCTCCGATTTTCTC
TCCGTGTGCTGAAGAAACCAAACAGAAGAGAGAGAAAAAGGGAAAGAGGG
AAGAAGGAGAGAGAGAGCAAAGCTTTAAGACTTCAAAGCCAAAGCTCTGA
TAAGAAGACCCGAAAGACTCTCCCTTCTCTTCTCATTGCCTCTGCAACTT
TTTTTCTATTTTTACTTCGTCACACATTTTTAATCAGCGCAAGACTCTCT
CTTCACACATTTCTCTCGCCATGTTTTCGTTAAACAGAAGCGCTTTTCTG
AATAATCCTGCGAGCATATCAGGCTCGTTCCCTGATAAGCATAGAAGAAT
ACTGCCTACAAGAGTGGTGGTTGCGGGCTCGTCTAACAGAGATAAGAGTA
ACGGCAGTCTTTTAATGGCAACCGATGAAAGCACAGCTACATTAAAAGAA
ATGAGAGATGGCTATGCCGAAGTTGTGGACCCCAAGTCCGGCGTCAGCGG
TGGGGTCCAGGACGTTTATGGTGAGGATACCGCCACCGAAGACCAGCCTG
TCACCCCTTGGTCTGTCTCAGTTGCTAGTGGGTATTCTTTGTTGAGAGAT
CCACACCACAACAAAGGGCTTGCCTTCTCTGAAAAAGAAAGGAATTCACA
TTACTTGCGTGGTCTTCTCCCCCCTACAGTTATATCCCAAGAGCTCCAGG
TGAAGAAAATGGTGCATAATATTCGGCAGTACCAAGTTCCACTCCAGAAG
TACATGGCCATGATGGATCTTCAGGAGAGAAATCAGAAACTGGNTCTATA
GCTTCTCATTGACAATGGTGAGGGAGGTACTCCCATTGTCTATACTCCAA
CTGGGGGAGAAGCTTGCCAGAAGTACGGGAGCATCTATAGGTCG
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