EY702924

Overview
NameEY702924
Unique NameEY702924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702924_ssr107 microsatellite EY702924_ssr107:107..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3677 contig Csv1_Contig3677:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO2_BACSU (Probable NAD-dependent malic enzyme 2 OS=Bacillus subtilis GN=maeA PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            G  +L  P  NKG+AFS +ER    L GLLPPTV+S + Q ++     +     L++ + + DL  RN+ L   LL ++     P+VYTPT GEA Q+Y   YR
Sbjct:   35 GKEVLSIPTLNKGVAFSLEERQELGLEGLLPPTVLSLDQQAQRAYEQFQAQPDRLRQNVYLSDLANRNEVLFYKLLKNHLREMLPVVYTPTVGEAIQEYSHEYR 138          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_ERWCT (NAD-dependent malic enzyme OS=Erwinia carotovora subsp. atroseptica GN=sfcA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+E+ER    L GLLP  V + E Q ++     ++++  ++K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTEEERADFNLAGLLPEAVETIEEQAERAWRQYQEFKHDIEKHVYLRNIQDTNETLFYRLLDGHLNEMMPIIYTPTVGEACEHFSDIYR 120          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_VIBVU (NAD-dependent malic enzyme OS=Vibrio vulnificus GN=sfcA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.760e-12
Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS +ER S  L GLLP T  + + QV++     + ++  + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALLSTPLLNKGSAFSAEERISFNLEGLLPETTETIQEQVERAYMQYKAFESDMDKHIYLRNIQDTNETLFYRLVQNHITEMMPIIYTPTVGAACENFSNIYR 117          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO11_VIBVY (NAD-dependent malic enzyme 1 OS=Vibrio vulnificus (strain YJ016) GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 8.760e-12
Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS +ER S  L GLLP T  + + QV++     + ++  + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALLSTPLLNKGSAFSAEERISFNLEGLLPETTETIQEQVERAYMQYKAFESDMDKHIYLRNIQDTNETLFYRLVQNHITEMMPIIYTPTVGAACENFSNIYR 117          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_PHOLL (NAD-dependent malic enzyme OS=Photorhabdus luminescens subsp. laumondii GN=sfcA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.144e-11
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            SG  LL  P  NKG AF+E+ER +  L GLLP  V + E Q ++       ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 SGPILLEFPLLNKGSAFTEEERRNFNLHGLLPEAVETIEEQAERAYRQYLDFKNDADKHIYLRNIQDTNETLFYRLLDAHLNEMMPIIYTPTVGEACEHFSDIYR 120          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_AERHH (NAD-dependent malic enzyme OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=sfcA PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.144e-11
Identity = 35/105 (33.33%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AF+ +ER++  L GLLP  + + E Q ++       +   + K++ + ++Q+ N+ L   LL ++     P++YTPT G+AC+++ +IYR
Sbjct:   16 AGPALLETPLLNKGSAFTSEERSNFNLEGLLPQNIETIEEQAERAYRQFMAFGNDMDKHIYLRNIQDTNETLFYRLLTNHLTEMLPVIYTPTVGKACEEFSNIYR 120          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_VIBCH (NAD-dependent malic enzyme OS=Vibrio cholerae GN=sfcA PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS +ER S  L GLLP    + + QV +     R ++  + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALLSTPLLNKGSAFSAEERASFNLEGLLPEATETIQEQVVRAYQQYRGFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYR 117          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_VIBC3 (NAD-dependent malic enzyme OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=sfcA PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 38/105 (36.19%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS +ER S  L GLLP    + + QV +     R ++  + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALLSTPLLNKGSAFSAEERASFNLEGLLPEATETIQEQVVRAYQQYRGFESDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYR 117          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SALG2 (NAD-dependent malic enzyme OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sfcA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ L   L+ ++ E   P++YTPT G AC+++  IYR
Sbjct:   16 AGPVLLEFPLLNKGSAFSAEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYR 120          
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_ENT38 (NAD-dependent malic enzyme OS=Enterobacter sp. (strain 638) GN=sfcA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.494e-11
Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ER+S  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ L   L+ ++ E   P++YTPT G AC+++  IYR
Sbjct:   16 AGPVLLEFPLLNKGSAFSAEERSSFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYR 120          
The following BLAST results are available for this feature:
BLAST of EY702924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MAO2_BACSU6.707e-1240.38Probable NAD-dependent malic enzyme 2 OS=Bacillus ... [more]
MAO1_ERWCT6.707e-1237.14NAD-dependent malic enzyme OS=Erwinia carotovora s... [more]
MAO1_VIBVU8.760e-1236.19NAD-dependent malic enzyme OS=Vibrio vulnificus GN... [more]
MAO11_VIBVY8.760e-1236.19NAD-dependent malic enzyme 1 OS=Vibrio vulnificus ... [more]
MAO1_PHOLL1.144e-1138.10NAD-dependent malic enzyme OS=Photorhabdus lumines... [more]
MAO1_AERHH1.144e-1133.33NAD-dependent malic enzyme OS=Aeromonas hydrophila... [more]
MAO1_VIBCH1.494e-1136.19NAD-dependent malic enzyme OS=Vibrio cholerae GN=s... [more]
MAO1_VIBC31.494e-1136.19NAD-dependent malic enzyme OS=Vibrio cholerae sero... [more]
MAO1_SALG21.494e-1136.19NAD-dependent malic enzyme OS=Salmonella gallinaru... [more]
MAO1_ENT381.494e-1136.19NAD-dependent malic enzyme OS=Enterobacter sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702924 ID=EY702924; Name=EY702924; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTTTCTTCTGATCTCTTCTTTCTCTTTCTCCGATTTTCTC
TCCGTGTGCTGAAGAAACCAAACAGAAGAGAGAGAAAAAGGGAAAGAGGG
AAGAAGGAGAGAGAGAGCAAAGCTTTAAGACTTCAAAGCCAAAGCTCTGA
TAAGAAGACCCGAAAGACTCTCCCTTCTCTTCTCATTGCCTCTGCAACTT
TTTTTCTATTTTTACTTCGTCACACATTTTTAATCAGCGCAAGACTCTCT
CTTCACACATTTCTCTCGCCATGTTTTCGTTAAACAGAAGCGCTTTTCTG
AATAATCCTGCGAGCATATCAGGCTCGTTCCCTGATAAGCATAGAAGAAT
ACTGCCTACAAGAGTGGTGGTTGCGGGCTCGTCTAACAGAGATAAGAGTA
ACGGCAGTCTTTTAATGGCAACCGATGAAAGCACAGCTACATTAAAAGAA
ATGAGAGATGGCTATGCCGAAGTTGTGGACCCCAAGTCCGGCGTCAGCGG
TGGGGTCCAGGACGTTTATGGTGAGGATACCGCCACCGAAGACCAGCCTG
TCACCCCTTGGTCTGTCTCAGTTGCTAGTGGGTATTCTTTGTTGAGAGAT
CCACACCACAACAAAGGGCTTGCCTTCTCTGAAAAAGAAAGGAATTCACA
TTACTTGCGTGGTCTTCTCCCCCCTACAGTTATATCCCAAGAGCTCCAGG
TGAAGAAAATGGTGCATAATATTCGGCAGTACCAAGTTCCACTCCAGAAG
TACATGGCCATGATGGATCTTCAGGAGAGAAATCAGAAACTGGNTCTATA
GCTTCTCATTGACAATGGTGAGGGAGGTACTCCCATTGTCTATACTCCAA
CTGGGGGAGAAGCTTGCCAGAAGTACGGGAGCATCTATAGGTCG
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