EY702924

Overview
NameEY702924
Unique NameEY702924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702924_ssr107 microsatellite EY702924_ssr107:107..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3677 contig Csv1_Contig3677:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SALAR (NAD-dependent malic enzyme OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sfcA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.952e-11
Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ L   L+ ++ E   P++YTPT G AC+++  IYR
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SALA4 (NAD-dependent malic enzyme OS=Salmonella agona (strain SL483) GN=sfcA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.952e-11
Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ L   L+ ++ E   P++YTPT G AC+++  IYR
Sbjct:   16 AGPVLLEFPLLNKGSAFSVEERRNFNLSGLLPEVVESIEEQAERAWLQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLEEMMPVIYTPTVGAACERFSEIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO3_BACSU (Probable NAD-dependent malic enzyme 3 OS=Bacillus subtilis GN=malS PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.348e-11
Identity = 41/104 (39.42%), Postives = 56/104 (53.85%), Query Frame = 1 
Query:  580 GYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            G  +L  P  NKG+AF+E+ER    L+G LPP V++ + Q K+           L K + +  L +RN+ L   LL D+     PIVYTPT G A Q+Y   YR
Sbjct:   18 GLEVLSVPFLNKGVAFTEEERKELGLKGFLPPKVLTIDDQAKRAYEQYSAQPDDLSKNVYLTALHDRNETLFYRLLNDHLGEMLPIVYTPTVGTAIQRYSHEYR 121
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP7 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.348e-11
Identity = 37/105 (35.24%), Postives = 63/105 (60.00%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ER++  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ L   L+ ++ E   P++YTPT G AC+++  IYR
Sbjct:   16 AGPVLLEFPLLNKGSAFSMEERSNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLIGNHLEEMMPVIYTPTVGAACERFSEIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO11_PHOPR (NAD-dependent malic enzyme 1 OS=Photobacterium profundum GN=sfcA1 PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.348e-11
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS +ER    L GLLP  + S E Q ++     +++   + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALLETPLLNKGSAFSIEERMFFNLEGLLPEAIESIEEQTERAYQQYQKFDKDMDKHIYLRNIQDTNETLFYRLVENHITEMMPIIYTPTVGAACEDFSNIYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_YERPY (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_YERPS (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_YERPP (NAD-dependent malic enzyme OS=Yersinia pestis (strain Pestoides F) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_YERPN (NAD-dependent malic enzyme OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_YERPE (NAD-dependent malic enzyme OS=Yersinia pestis GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR 120
The following BLAST results are available for this feature:
BLAST of EY702924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MAO1_SALAR1.952e-1136.19NAD-dependent malic enzyme OS=Salmonella arizonae ... [more]
MAO1_SALA41.952e-1136.19NAD-dependent malic enzyme OS=Salmonella agona (st... [more]
MAO3_BACSU4.348e-1139.42Probable NAD-dependent malic enzyme 3 OS=Bacillus ... [more]
MAO1_KLEP74.348e-1135.24NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO11_PHOPR4.348e-1135.24NAD-dependent malic enzyme 1 OS=Photobacterium pro... [more]
MAO1_YERPY5.678e-1137.14NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPS5.678e-1137.14NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPP5.678e-1137.14NAD-dependent malic enzyme OS=Yersinia pestis (str... [more]
MAO1_YERPN5.678e-1137.14NAD-dependent malic enzyme OS=Yersinia pestis bv. ... [more]
MAO1_YERPE5.678e-1137.14NAD-dependent malic enzyme OS=Yersinia pestis GN=s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702924 ID=EY702924; Name=EY702924; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTTTCTTCTGATCTCTTCTTTCTCTTTCTCCGATTTTCTC
TCCGTGTGCTGAAGAAACCAAACAGAAGAGAGAGAAAAAGGGAAAGAGGG
AAGAAGGAGAGAGAGAGCAAAGCTTTAAGACTTCAAAGCCAAAGCTCTGA
TAAGAAGACCCGAAAGACTCTCCCTTCTCTTCTCATTGCCTCTGCAACTT
TTTTTCTATTTTTACTTCGTCACACATTTTTAATCAGCGCAAGACTCTCT
CTTCACACATTTCTCTCGCCATGTTTTCGTTAAACAGAAGCGCTTTTCTG
AATAATCCTGCGAGCATATCAGGCTCGTTCCCTGATAAGCATAGAAGAAT
ACTGCCTACAAGAGTGGTGGTTGCGGGCTCGTCTAACAGAGATAAGAGTA
ACGGCAGTCTTTTAATGGCAACCGATGAAAGCACAGCTACATTAAAAGAA
ATGAGAGATGGCTATGCCGAAGTTGTGGACCCCAAGTCCGGCGTCAGCGG
TGGGGTCCAGGACGTTTATGGTGAGGATACCGCCACCGAAGACCAGCCTG
TCACCCCTTGGTCTGTCTCAGTTGCTAGTGGGTATTCTTTGTTGAGAGAT
CCACACCACAACAAAGGGCTTGCCTTCTCTGAAAAAGAAAGGAATTCACA
TTACTTGCGTGGTCTTCTCCCCCCTACAGTTATATCCCAAGAGCTCCAGG
TGAAGAAAATGGTGCATAATATTCGGCAGTACCAAGTTCCACTCCAGAAG
TACATGGCCATGATGGATCTTCAGGAGAGAAATCAGAAACTGGNTCTATA
GCTTCTCATTGACAATGGTGAGGGAGGTACTCCCATTGTCTATACTCCAA
CTGGGGGAGAAGCTTGCCAGAAGTACGGGAGCATCTATAGGTCG
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