EY702924

Overview
NameEY702924
Unique NameEY702924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702924_ssr107 microsatellite EY702924_ssr107:107..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3677 contig Csv1_Contig3677:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_YERPB (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_YERPA (NAD-dependent malic enzyme OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_YERP3 (NAD-dependent malic enzyme OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AF+  ERN   L GLLP  V + E Q ++     + ++    K++ + ++Q+ N+ L   LL  +     PI+YTPT GEAC+ +  IYR
Sbjct:   16 AGPILLEFPLLNKGSAFTNDERNHFNLHGLLPEAVETIEEQAERAYRQYQDFKNDDDKHIYLRNIQDTNETLFYRLLEAHLSEMMPIIYTPTVGEACEHFSDIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_VIBFM (NAD-dependent malic enzyme OS=Vibrio fischeri (strain MJ11) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS  ER    L GLLP  + S E Q  +     + ++  + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALLSTPLLNKGSAFSTTERKYFNLEGLLPEAIESIEEQTGRAYKQYQSFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_VIBF1 (NAD-dependent malic enzyme OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS  ER    L GLLP  + S E Q  +     + ++  + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALLSTPLLNKGSAFSTTERKYFNLEGLLPEAIESIEEQTGRAYKQYQNFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_KLEP3 (NAD-dependent malic enzyme OS=Klebsiella pneumoniae (strain 342) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 37/105 (35.24%), Postives = 63/105 (60.00%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ER++  L GLLP  V + E Q ++     + ++  + K++ + ++Q+ N+ L   L+ ++ E   P++YTPT G AC+++  IYR
Sbjct:   16 AGPVLLEFPLLNKGSAFSLEERSNFNLLGLLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLIGNHLEEMMPVIYTPTVGAACERFSEIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_ALISL (NAD-dependent malic enzyme OS=Aliivibrio salmonicida (strain LFI1238) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.678e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL  P  NKG AFS  ER    L GLLP  + S E Q  +     + ++  + K++ + ++Q+ N+ L   L+ ++     PI+YTPT G AC+ + +IYR
Sbjct:   13 AGPALLSTPLLNKGSAFSTTERKYFNLEGLLPEAIESIEEQTGRAYKQYQSFENDMDKHIYLRNIQDTNETLFYRLVQNHISEMMPIIYTPTVGAACENFSNIYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SHESW (NAD-dependent malic enzyme OS=Shewanella sp. (strain W3-18-1) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G ++L  P  NKG AFSE+ER    L GL+P  + + E Q  +     R +   L K++ + ++Q+ N+ L   L+ +N     PI+YTPT G AC+++   YR
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SHEPC (NAD-dependent malic enzyme OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G ++L  P  NKG AFSE+ER    L GL+P  + + E Q  +     R +   L K++ + ++Q+ N+ L   L+ +N     PI+YTPT G AC+++   YR
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB9 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS195) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G ++L  P  NKG AFSE+ER    L GL+P  + + E Q  +     R +   L K++ + ++Q+ N+ L   L+ +N     PI+YTPT G AC+++   YR
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYR 117
The following BLAST results are available for this feature:
BLAST of EY702924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MAO1_YERPB5.678e-1137.14NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_YERPA5.678e-1137.14NAD-dependent malic enzyme OS=Yersinia pestis bv. ... [more]
MAO1_YERP35.678e-1137.14NAD-dependent malic enzyme OS=Yersinia pseudotuber... [more]
MAO1_VIBFM5.678e-1135.24NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_VIBF15.678e-1135.24NAD-dependent malic enzyme OS=Vibrio fischeri (str... [more]
MAO1_KLEP35.678e-1135.24NAD-dependent malic enzyme OS=Klebsiella pneumonia... [more]
MAO1_ALISL5.678e-1135.24NAD-dependent malic enzyme OS=Aliivibrio salmonici... [more]
MAO1_SHESW7.416e-1135.24NAD-dependent malic enzyme OS=Shewanella sp. (stra... [more]
MAO1_SHEPC7.416e-1135.24NAD-dependent malic enzyme OS=Shewanella putrefaci... [more]
MAO1_SHEB97.416e-1135.24NAD-dependent malic enzyme OS=Shewanella baltica (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702924 ID=EY702924; Name=EY702924; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTTTCTTCTGATCTCTTCTTTCTCTTTCTCCGATTTTCTC
TCCGTGTGCTGAAGAAACCAAACAGAAGAGAGAGAAAAAGGGAAAGAGGG
AAGAAGGAGAGAGAGAGCAAAGCTTTAAGACTTCAAAGCCAAAGCTCTGA
TAAGAAGACCCGAAAGACTCTCCCTTCTCTTCTCATTGCCTCTGCAACTT
TTTTTCTATTTTTACTTCGTCACACATTTTTAATCAGCGCAAGACTCTCT
CTTCACACATTTCTCTCGCCATGTTTTCGTTAAACAGAAGCGCTTTTCTG
AATAATCCTGCGAGCATATCAGGCTCGTTCCCTGATAAGCATAGAAGAAT
ACTGCCTACAAGAGTGGTGGTTGCGGGCTCGTCTAACAGAGATAAGAGTA
ACGGCAGTCTTTTAATGGCAACCGATGAAAGCACAGCTACATTAAAAGAA
ATGAGAGATGGCTATGCCGAAGTTGTGGACCCCAAGTCCGGCGTCAGCGG
TGGGGTCCAGGACGTTTATGGTGAGGATACCGCCACCGAAGACCAGCCTG
TCACCCCTTGGTCTGTCTCAGTTGCTAGTGGGTATTCTTTGTTGAGAGAT
CCACACCACAACAAAGGGCTTGCCTTCTCTGAAAAAGAAAGGAATTCACA
TTACTTGCGTGGTCTTCTCCCCCCTACAGTTATATCCCAAGAGCTCCAGG
TGAAGAAAATGGTGCATAATATTCGGCAGTACCAAGTTCCACTCCAGAAG
TACATGGCCATGATGGATCTTCAGGAGAGAAATCAGAAACTGGNTCTATA
GCTTCTCATTGACAATGGTGAGGGAGGTACTCCCATTGTCTATACTCCAA
CTGGGGGAGAAGCTTGCCAGAAGTACGGGAGCATCTATAGGTCG
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