EY702924

Overview
NameEY702924
Unique NameEY702924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY702924_ssr107 microsatellite EY702924_ssr107:107..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig3677 contig Csv1_Contig3677:1..858. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB8 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS185) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G ++L  P  NKG AFSE+ER    L GL+P  + + E Q  +     R +   L K++ + ++Q+ N+ L   L+ +N     PI+YTPT G AC+++   YR
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB5 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G ++L  P  NKG AFSE+ER    L GL+P  + + E Q  +     R +   L K++ + ++Q+ N+ L   L+ +N     PI+YTPT G AC+++   YR
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SHEB2 (NAD-dependent malic enzyme OS=Shewanella baltica (strain OS223) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G ++L  P  NKG AFSE+ER    L GL+P  + + E Q  +     R +   L K++ + ++Q+ N+ L   L+ +N     PI+YTPT G AC+++   YR
Sbjct:   13 AGPAILEAPLINKGSAFSEEERIFFNLEGLVPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNISEMMPIIYTPTVGLACERFSKNYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_CITK8 (NAD-dependent malic enzyme OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=sfcA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 37/105 (35.24%), Postives = 62/105 (59.05%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G  LL  P  NKG AFS +ER +  L GLLP  V S E Q ++     + ++  + K++ + ++Q+ N+ L   L+ ++ +   P++YTPT G AC+++  IYR
Sbjct:   16 AGPVLLEFPLLNKGSAFSIEERRNFNLLGLLPEVVESIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVQNHLDEMMPVIYTPTVGAACERFSEIYR 120
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO1_SHEAM (NAD-dependent malic enzyme OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=sfcA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G ++L  P  NKG AF+E+ER    L GLLP  + + E Q  +     R +   L K++ + ++Q+ N+ L   L+ +N     PI+YTPT G AC+++   YR
Sbjct:   13 AGPAILEAPLINKGSAFTEEERIFFNLEGLLPYAIETIEEQASRAYDQFRSFNNDLDKHIYLRNIQDTNETLFYRLVQNNIAEMMPIIYTPTVGLACERFSKNYR 117
[Close]
BLAST of EY702924 vs. ExPASy Swiss-Prot
Match: MAO12_PHOPR (NAD-dependent malic enzyme 2 OS=Photobacterium profundum GN=sfcA2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.685e-11
Identity = 36/105 (34.29%), Postives = 62/105 (59.05%), Query Frame = 1 
Query:  577 SGYSLLRDPHHNKGLAFSEKERNSHYLRGLLPPTVISQELQVKKMVHNIRQYQVPLQKYMAMMDLQERNQKLXL*LLIDNGEGGTPIVYTPTGGEACQKYGSIYR 891
            +G +LL +   NKG AFS +ER +  L GLLP  + S   Q ++     + +   + K++ + ++Q+ N+ L   L+ ++ E   PI+YTPT G AC+++ +IYR
Sbjct:   13 AGPTLLENALLNKGSAFSPEERQNFSLMGLLPAAIESITEQEERAYSQYQTFNDDMDKHIYLRNIQDTNETLYYRLIDNHIEEMMPIIYTPTVGAACEQFSNIYR 117
The following BLAST results are available for this feature:
BLAST of EY702924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 96
Match NameE-valueIdentityDescription
MAO1_SHEB87.416e-1135.24NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB57.416e-1135.24NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_SHEB27.416e-1135.24NAD-dependent malic enzyme OS=Shewanella baltica (... [more]
MAO1_CITK87.416e-1135.24NAD-dependent malic enzyme OS=Citrobacter koseri (... [more]
MAO1_SHEAM9.685e-1135.24NAD-dependent malic enzyme OS=Shewanella amazonens... [more]
MAO12_PHOPR9.685e-1134.29NAD-dependent malic enzyme 2 OS=Photobacterium pro... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-013-G10-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702924 ID=EY702924; Name=EY702924; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGTTTCTTCTGATCTCTTCTTTCTCTTTCTCCGATTTTCTC
TCCGTGTGCTGAAGAAACCAAACAGAAGAGAGAGAAAAAGGGAAAGAGGG
AAGAAGGAGAGAGAGAGCAAAGCTTTAAGACTTCAAAGCCAAAGCTCTGA
TAAGAAGACCCGAAAGACTCTCCCTTCTCTTCTCATTGCCTCTGCAACTT
TTTTTCTATTTTTACTTCGTCACACATTTTTAATCAGCGCAAGACTCTCT
CTTCACACATTTCTCTCGCCATGTTTTCGTTAAACAGAAGCGCTTTTCTG
AATAATCCTGCGAGCATATCAGGCTCGTTCCCTGATAAGCATAGAAGAAT
ACTGCCTACAAGAGTGGTGGTTGCGGGCTCGTCTAACAGAGATAAGAGTA
ACGGCAGTCTTTTAATGGCAACCGATGAAAGCACAGCTACATTAAAAGAA
ATGAGAGATGGCTATGCCGAAGTTGTGGACCCCAAGTCCGGCGTCAGCGG
TGGGGTCCAGGACGTTTATGGTGAGGATACCGCCACCGAAGACCAGCCTG
TCACCCCTTGGTCTGTCTCAGTTGCTAGTGGGTATTCTTTGTTGAGAGAT
CCACACCACAACAAAGGGCTTGCCTTCTCTGAAAAAGAAAGGAATTCACA
TTACTTGCGTGGTCTTCTCCCCCCTACAGTTATATCCCAAGAGCTCCAGG
TGAAGAAAATGGTGCATAATATTCGGCAGTACCAAGTTCCACTCCAGAAG
TACATGGCCATGATGGATCTTCAGGAGAGAAATCAGAAACTGGNTCTATA
GCTTCTCATTGACAATGGTGAGGGAGGTACTCCCATTGTCTATACTCCAA
CTGGGGGAGAAGCTTGCCAGAAGTACGGGAGCATCTATAGGTCG
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