EY650109

Overview
NameEY650109
Unique NameEY650109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_AERS4 (Probable ubiquinone biosynthesis protein ubiB OS=Aeromonas salmonicida (strain A449) GN=ubiB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.098e-23
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSY---DGKL-AYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   EA N ++ R+ + G   + +PE++ E      L+ME + G  +S++  L         L E GV   F Q+    F+HAD HPGN+F SY   D  L   ID G++G    E +    E  L   NRD+  +A+
Sbjct:  200 LDELNLMREAANAIQLRRNFTGSDALYVPEVFTEHCREHVLVMERIYGIPVSDIPALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSYEHPDNPLWIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAE 341          

HSP 2 Score: 60.8474 bits (146), Expect = 2.098e-23
Identity = 25/70 (35.71%), Postives = 46/70 (65.71%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            IE+ LG P++ LF +    P+A+AS+ QV+  RL+++GR + +KV RP ++  I  D+ ++  +A L+ +
Sbjct:  109 IEESLGCPVETLFDDFDETPLASASIAQVHTGRLKENGREIVIKVIRPDIEPVIEADLRLMQTLARLVAR 178          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_AERHH (Probable ubiquinone biosynthesis protein ubiB OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.622e-23
Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDGK----LAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   EA N ++ R+ + G + + +PE++ E    + L+ME + G  +S++  L         L E GV   F Q+    F+HAD HPGN+F SY+         ID G++G    E +    E  L   NRD+  +A+
Sbjct:  200 LDELNLMREAANAIQLRRNFTGSEALYVPEVFTEHCREQVLVMERIYGIPVSDIAALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSYEHPENPLWIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAE 341          

HSP 2 Score: 58.5362 bits (140), Expect = 4.622e-23
Identity = 26/70 (37.14%), Postives = 45/70 (64.29%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            IE  LG  I+ LF +    P+A+AS+ QV+ ARL+++GR + +KV RP ++  I  D+ ++  +A L+ +
Sbjct:  109 IEASLGCTIETLFDDFDETPLASASIAQVHTARLKENGREIVIKVIRPDIEPVIEADLRLMQALARLVAR 178          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURP8 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ubiB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.019e-22
Identity = 48/139 (34.53%), Postives = 70/139 (50.36%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEMY E  T   L+ME + G  +S+V  L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMYWEYCTANVLVMERMVGVPISQVDTLRVAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA 338          

HSP 2 Score: 52.373 bits (124), Expect = 1.019e-22
Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLR---QSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            IE+ LG P+D +F +    PVA+AS+ QV+ A L+    +G+ VAVKV RP +   I  D+ +L  IA
Sbjct:  104 IEKSLGAPVDTIFDDFERVPVASASIAQVHFATLKIGQHAGKQVAVKVLRPNMLPVIDSDLALLRDIA 171          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_VIBFM (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio fischeri (strain MJ11) GN=ubiB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.724e-22
Identity = 39/142 (27.46%), Postives = 75/142 (52.82%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDG----KLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + ELD + EA N ++ R+ + G +++ +PE+ ++ ++   ++ E + G ++S+++ L         L E GV   F Q+    F+HAD HPGN+F + D     +   +D G++G   +E +    E  L   N D+  +A+
Sbjct:  200 LDELDLRREASNAMQLRRNFEGSEELYVPEVILDLSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYHKVAQ 341          

HSP 2 Score: 59.3066 bits (142), Expect = 1.724e-22
Identity = 27/70 (38.57%), Postives = 48/70 (68.57%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            +E ELG P+D  F++   +P+A+AS+ QV+ A+L+ SGR + +KV RP ++  I  DI +++ +A L+ +
Sbjct:  109 MEMELGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDIRLMYRMARLVEQ 178          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_VIBF1 (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ubiB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.724e-22
Identity = 39/142 (27.46%), Postives = 75/142 (52.82%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDG----KLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + ELD + EA N ++ R+ + G +++ +PE+ ++ ++   ++ E + G ++S+++ L         L E GV   F Q+    F+HAD HPGN+F + D     +   +D G++G   +E +    E  L   N D+  +A+
Sbjct:  200 LDELDLRREASNAMQLRRNFEGSEELYVPEVILDLSSEHLMVSERIYGIQVSDIEQLERNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYHKVAQ 341          

HSP 2 Score: 59.3066 bits (142), Expect = 1.724e-22
Identity = 27/70 (38.57%), Postives = 48/70 (68.57%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            +E ELG P+D  F++   +P+A+AS+ QV+ A+L+ SGR + +KV RP ++  I  DI +++ +A L+ +
Sbjct:  109 MEMELGGPLDNWFTDFDIKPLASASIAQVHTAKLKDSGREIVLKVIRPDIRPVIESDIRLMYRMARLVEQ 178          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHEAM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.242e-22
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLF--RSYDGKLAYI--DFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N  K R  +     + IP +Y E    + ++ME ++G  +S+++ L         L E GV   F Q+    F+HAD HPGN+F  R +     YI  D G+MG   EE +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNATKLRNNFLDSDALYIPYVYEELCHPRLMVMERIDGIPVSDIEALNAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFISREHPENPFYIGLDCGIMGSLNEEDKRYLAENFLAFFNRDYHRIAQ 341          

HSP 2 Score: 56.6102 bits (135), Expect = 2.242e-22
Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            IE EL  PID LF +    P+A+AS+ QV+ A L+ +G+ V +KV RP V+A I  D+ ++  +A  + +
Sbjct:  109 IEAELKAPIDSLFDDFDDTPLASASISQVHTATLKSNGQQVVLKVLRPNVEANIKADLELMLQVATWVNR 178          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURXL (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia xenovorans (strain LB400) GN=ubiB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.244e-22
Identity = 48/139 (34.53%), Postives = 71/139 (51.08%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEMY E  T   L+ME + G  +S+V+ L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA 338          

HSP 2 Score: 51.9878 bits (123), Expect = 2.244e-22
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLR---QSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E+ LG P+D LF +    PVA+AS+ QV+ A ++    +G+ VAVKV RP +   I  D+ +L  IA
Sbjct:  104 VEKSLGAPVDVLFDDFERVPVASASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSDLALLRDIA 171          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_NEIMB (Probable ubiquinone biosynthesis protein ubiB OS=Neisseria meningitidis serogroup B GN=ubiB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.246e-22
Identity = 38/135 (28.15%), Postives = 67/135 (49.63%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDLY--------LIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA N  +  + +     +++P+++ +  T   L +EW++G  +S++  L         L + GV   F Q+   GF+HAD HPGN+  + D +   +DFG++G   +  +       L   NRD+  +A
Sbjct:  198 ELDLMREAANASQLGRNFQNSDMLIVPKVFYDYCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVA 332          

HSP 2 Score: 59.6918 bits (143), Expect = 2.246e-22
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            IE+ LG  I++L++E   EP+A+AS+ QV++ARL  SG  VAVKV RP +   I  D+ ++ F AG + +
Sbjct:  106 IEKSLGQSIEKLYAEFETEPIASASIAQVHKARL-HSGEQVAVKVLRPNLLPVIEQDLSLMRFGAGWVER 174          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHEWM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ubiB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.917e-22
Identity = 48/140 (34.29%), Postives = 69/140 (49.29%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRS----YDGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  +     + IP MY E    + ++ME +EG  +S++  L         L E GV   F Q+    F+HAD HPGN+F S     D     +D G+MG   EE +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAVKLRNNFLDSGSLYIPYMYEELCFTRLIVMERIEGIPVSDMAALKAQGTNLKVLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPEDPYYIGLDCGIMGTLTEEDKRYLAENFLAFFNRDYHRIAQ 341          

HSP 2 Score: 55.0694 bits (131), Expect = 2.917e-22
Identity = 26/68 (38.24%), Postives = 41/68 (60.29%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLI 258
            IE ELG  ID  F +    P+A+AS+ QV+ A L+ +G+ V +KV RP V+A +  D+ ++   A  +
Sbjct:  109 IELELGTSIDTYFDDFDNTPLASASISQVHTATLKSNGKAVVLKVLRPNVEAQVDADLHLMSQAANFL 176          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURPS (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia pseudomallei GN=ubiB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.919e-22
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEM+ + +T   L+ME + G  +S+V  L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA 338          

HSP 2 Score: 53.1434 bits (126), Expect = 2.919e-22
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQS---GRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E+ LG  ID LF E    PVA+AS+ QV+ A+L+Q    G+ VAVKV RP +   I  D+ ++  IA
Sbjct:  104 VEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIA 171          
The following BLAST results are available for this feature:
BLAST of EY650109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
UBIB_AERS42.098e-2332.39Probable ubiquinone biosynthesis protein ubiB OS=A... [more]
UBIB_AERHH4.622e-2330.99Probable ubiquinone biosynthesis protein ubiB OS=A... [more]
UBIB_BURP81.019e-2234.53Probable ubiquinone biosynthesis protein ubiB OS=B... [more]
UBIB_VIBFM1.724e-2227.46Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_VIBF11.724e-2227.46Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_SHEAM2.242e-2233.57Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_BURXL2.244e-2234.53Probable ubiquinone biosynthesis protein ubiB OS=B... [more]
UBIB_NEIMB2.246e-2228.15Probable ubiquinone biosynthesis protein ubiB OS=N... [more]
UBIB_SHEWM2.917e-2234.29Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_BURPS2.919e-2233.09Probable ubiquinone biosynthesis protein ubiB OS=B... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650109 ID=EY650109; Name=EY650109; organism=Citrus sinensis; type=EST; length=880bp
CGGGCGCGTGGGCGGACGCGTGGGCCGGGGGCCGGTGGAGTTGCTTTCAA
TACAATAGAACAGGAACTTGGATTACCGATAGATGAGCTTTTCTCTGAAA
TATCGCCAGAACCTGTAGCAGCAGCGTCTCTTGGGCAGGTTTATCAAGCT
AGACTTCGTCAGAGTGGAAGAGTTGTTGCTGTCAAAGTGCGAAGACCTGG
TGTTCAGGCTGCAATTTCATTAGACATTTTCATACTGCATTTTATAGCAG
GGTTGATCCGGAAAGCTAGAAAATTCAACACTGATCTTCATGCTGTAGTT
GATGAATGGGCATCAAGTCTTTTTCGGGTGATCCCATTGAATGCAGGAGC
TGGACTATAAAATAGAAGCAAAAAATGGGCTTAAATTTAGACAACTATAT
GGGGGAATACAAGATGTTTTGATTCCAGAAATGTATGTGGAGCAAACAAC
TCGAAAGGGCCTTATTATGGAATGGGTCGAGGGGCAAAAGTTGTCTGAAG
TAAAGGATCTTTACTTAATTGAGGGAGGAGTATACTGGTCGTTCAATCAA
CTTTTGGAGAAGGGGTTTTATCATGCTGATCCACATCCGGGAAATCTTTT
TCGTTCATATGATGGGAAGCTAGCTTATATAGATTTTGGTATGATGGGTG
AATTTAAAGAAGAACTCCGTGAAAGATTTATGGAAGCTTGTCTCCATCTT
GTGAATCGGGATTTTGATGCACTGGCTAAGGATTTTGGTACTCTTGAGCT
ACCTCCCCAACTGCAGAGAGGNAGGCTGTTACAAAGCTCTACAGGGGTCT
GTCNAATGCTNGTGCCAAGGAGTCACAAATCAGCTTTTGGGGACCCTCTA
GAACTTGGAGCTACCATGTAGGGATAAGTC
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