EY650109 | Citrus Genome Database

Overview


Name	EY650109
Unique Name	EY650109
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	880

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURP6 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia pseudomallei (strain 668) GN=ubiB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.919e-22
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEM+ + +T   L+ME + G  +S+V  L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA 338

HSP 2 Score: 53.1434 bits (126), Expect = 2.919e-22
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQS---GRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E+ LG  ID LF E    PVA+AS+ QV+ A+L+Q    G+ VAVKV RP +   I  D+ ++  IA
Sbjct:  104 VEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIA 171

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURP1 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia pseudomallei (strain 1710b) GN=ubiB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.919e-22
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEM+ + +T   L+ME + G  +S+V  L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA 338

HSP 2 Score: 53.1434 bits (126), Expect = 2.919e-22
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQS---GRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E+ LG  ID LF E    PVA+AS+ QV+ A+L+Q    G+ VAVKV RP +   I  D+ ++  IA
Sbjct:  104 VEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIA 171

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURP0 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia pseudomallei (strain 1106a) GN=ubiB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.919e-22
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEM+ + +T   L+ME + G  +S+V  L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA 338

HSP 2 Score: 53.1434 bits (126), Expect = 2.919e-22
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQS---GRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E+ LG  ID LF E    PVA+AS+ QV+ A+L+Q    G+ VAVKV RP +   I  D+ ++  IA
Sbjct:  104 VEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIA 171

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURMS (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia mallei (strain SAVP1) GN=ubiB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.919e-22
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEM+ + +T   L+ME + G  +S+V  L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA 338

HSP 2 Score: 53.1434 bits (126), Expect = 2.919e-22
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQS---GRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E+ LG  ID LF E    PVA+AS+ QV+ A+L+Q    G+ VAVKV RP +   I  D+ ++  IA
Sbjct:  104 VEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIA 171

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURMA (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia mallei GN=ubiB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.919e-22
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEM+ + +T   L+ME + G  +S+V  L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA 338

HSP 2 Score: 53.1434 bits (126), Expect = 2.919e-22
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQS---GRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E+ LG  ID LF E    PVA+AS+ QV+ A+L+Q    G+ VAVKV RP +   I  D+ ++  IA
Sbjct:  104 VEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIA 171

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURM9 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia mallei (strain NCTC 10229) GN=ubiB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.919e-22
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEM+ + +T   L+ME + G  +S+V  L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA 338

HSP 2 Score: 53.1434 bits (126), Expect = 2.919e-22
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQS---GRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E+ LG  ID LF E    PVA+AS+ QV+ A+L+Q    G+ VAVKV RP +   I  D+ ++  IA
Sbjct:  104 VEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIA 171

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURM7 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia mallei (strain NCTC 10247) GN=ubiB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.919e-22
Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEM+ + +T   L+ME + G  +S+V  L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMFWDYSTPAVLVMERMTGVPISQVDTLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPKHFGRYIALDFGIVGALSDFDKNYLAQNFLAFFKRDYHRVA 338

HSP 2 Score: 53.1434 bits (126), Expect = 2.919e-22
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQS---GRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E+ LG  ID LF E    PVA+AS+ QV+ A+L+Q    G+ VAVKV RP +   I  D+ ++  IA
Sbjct:  104 VEKSLGARIDVLFDEFERVPVASASIAQVHFAKLKQGEHKGKAVAVKVLRPNMLPVIDSDLALMRDIA 171

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_BURPP (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ubiB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.798e-22
Identity = 48/139 (34.53%), Postives = 71/139 (51.08%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA NG + R+ + G+  +L+PEMY E  T   L+ME + G  +S+V+ L         L   GV   F Q+   GF+HAD HPGN+  S D    G+   +DFG++G   +  +    +  L    RD+  +A
Sbjct:  200 ELDLMREAANGSQLRRNFAGLDLLLVPEMYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVA 338

HSP 2 Score: 51.2174 bits (121), Expect = 3.798e-22
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLR---QSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            +E  LG P+D LF +    PVA+AS+ QV+ A ++    +G+ VAVKV RP +   I  D+ +L  IA
Sbjct:  104 VENALGAPVDVLFDDFERVPVASASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSDLALLRDIA 171

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_HAHCH (Probable ubiquinone biosynthesis protein ubiB OS=Hahella chejuensis (strain KCTC 2396) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.938e-22
Identity = 43/141 (30.50%), Postives = 69/141 (48.94%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLF----RSYDGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            + ELD + EA N  + ++ + G + + IPE+Y E T  + L+ME + G  +++V+ L         L E GV   F Q+    F+HAD HPGN+F       + +   ID G++G    E +       L    RD+  +A
Sbjct:  197 IDELDLQREAANTSQLKRNFAGSELIYIPEVYWEMTHSRVLVMERIYGVPIADVEQLRKANVNMKLLAERGVEIFFTQVFRDSFFHADMHPGNIFVDVSNPANPRYIAIDCGIVGTLTPEDQSYLARNLLAFFRRDYRQVA 337

HSP 2 Score: 59.3066 bits (142), Expect = 4.938e-22
Identity = 32/81 (39.51%), Postives = 50/81 (61.73%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKARKFNTDLHAV 297
            IE+ L  P+ ELF++    P+A+AS+ QV+ A L+ +G+ V VKV RPG++  I LDI ++  +A L+    +    LH V
Sbjct:  107 IEESLKSPVSELFADFQTYPMASASIAQVHAATLK-NGKEVVVKVIRPGIEKTIRLDIALMLLVARLVENYWEDGKRLHPV 186

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHEFN (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella frigidimarina (strain NCIMB 400) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.356e-22
Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLF--RSYDGKLAYI--DFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  + G   + +P +Y E + ++ ++ME + G  +S+ + L         L E GV   F Q+    F+HAD HPGN+F  R +     YI  D G+MG   E  +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAIKLRNNFLGSNSLYVPFVYEEHSYQRLMVMERIYGIPVSDTEALRAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISREHPDDPFYIGLDCGIMGTLTEVDKRYLAENFLAFFNRDYHRIAQ 341

HSP 2 Score: 54.299 bits (129), Expect = 8.356e-22
Identity = 27/68 (39.71%), Postives = 42/68 (61.76%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLI 258
            IE ELG PI   F + +  P+A+AS+ QV+ A L+ +G+ V +KV RP V+  I  D+ ++   A L+
Sbjct:  109 IEAELGAPIATYFDDFNDTPLASASISQVHTATLKSNGKAVVLKVLRPNVEQQILADLQLMTQTANLL 176

The following BLAST results are available for this feature:

BLAST of EY650109 vs. ExPASy Swiss-Prot

BLAST of EY650109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166


Match Name	E-value	Identity	Description
UBIB_BURP6	2.919e-22	33.09	Probable ubiquinone biosynthesis protein ubiB OS=B...	[more]
UBIB_BURP1	2.919e-22	33.09	Probable ubiquinone biosynthesis protein ubiB OS=B...	[more]
UBIB_BURP0	2.919e-22	33.09	Probable ubiquinone biosynthesis protein ubiB OS=B...	[more]
UBIB_BURMS	2.919e-22	33.09	Probable ubiquinone biosynthesis protein ubiB OS=B...	[more]
UBIB_BURMA	2.919e-22	33.09	Probable ubiquinone biosynthesis protein ubiB OS=B...	[more]
UBIB_BURM9	2.919e-22	33.09	Probable ubiquinone biosynthesis protein ubiB OS=B...	[more]
UBIB_BURM7	2.919e-22	33.09	Probable ubiquinone biosynthesis protein ubiB OS=B...	[more]
UBIB_BURPP	3.798e-22	34.53	Probable ubiquinone biosynthesis protein ubiB OS=B...	[more]
UBIB_HAHCH	4.938e-22	30.50	Probable ubiquinone biosynthesis protein ubiB OS=H...	[more]
UBIB_SHEFN	8.356e-22	32.86	Probable ubiquinone biosynthesis protein ubiB OS=S...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-100-007-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY650109 ID=EY650109; Name=EY650109; organism=Citrus sinensis; type=EST; length=880bp
CGGGCGCGTGGGCGGACGCGTGGGCCGGGGGCCGGTGGAGTTGCTTTCAA
TACAATAGAACAGGAACTTGGATTACCGATAGATGAGCTTTTCTCTGAAA
TATCGCCAGAACCTGTAGCAGCAGCGTCTCTTGGGCAGGTTTATCAAGCT
AGACTTCGTCAGAGTGGAAGAGTTGTTGCTGTCAAAGTGCGAAGACCTGG
TGTTCAGGCTGCAATTTCATTAGACATTTTCATACTGCATTTTATAGCAG
GGTTGATCCGGAAAGCTAGAAAATTCAACACTGATCTTCATGCTGTAGTT
GATGAATGGGCATCAAGTCTTTTTCGGGTGATCCCATTGAATGCAGGAGC
TGGACTATAAAATAGAAGCAAAAAATGGGCTTAAATTTAGACAACTATAT
GGGGGAATACAAGATGTTTTGATTCCAGAAATGTATGTGGAGCAAACAAC
TCGAAAGGGCCTTATTATGGAATGGGTCGAGGGGCAAAAGTTGTCTGAAG
TAAAGGATCTTTACTTAATTGAGGGAGGAGTATACTGGTCGTTCAATCAA
CTTTTGGAGAAGGGGTTTTATCATGCTGATCCACATCCGGGAAATCTTTT
TCGTTCATATGATGGGAAGCTAGCTTATATAGATTTTGGTATGATGGGTG
AATTTAAAGAAGAACTCCGTGAAAGATTTATGGAAGCTTGTCTCCATCTT
GTGAATCGGGATTTTGATGCACTGGCTAAGGATTTTGGTACTCTTGAGCT
ACCTCCCCAACTGCAGAGAGGNAGGCTGTTACAAAGCTCTACAGGGGTCT
GTCNAATGCTNGTGCCAAGGAGTCACAAATCAGCTTTTGGGGACCCTCTA
GAACTTGGAGCTACCATGTAGGGATAAGTC