EY650109

Overview
NameEY650109
Unique NameEY650109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ERWT9 (Probable ubiquinone biosynthesis protein ubiB OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ubiB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 8.357e-22
Identity = 45/142 (31.69%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSY----DGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   EA N ++ R+ +   Q + +PE+Y +  +   L+ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY    D +   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  200 LDELNLLREAANAIQLRRNFADGQMLYVPEIYSDYCSENMLVMERIYGIPISDVATLEQHGVNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 341          

HSP 2 Score: 52.7582 bits (125), Expect = 8.357e-22
Identity = 24/65 (36.92%), Postives = 41/65 (63.08%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            IE  LG P++  F +    P+A+AS+ QV+ A L+++GR V +KV RP +   I  D+ +++ +A
Sbjct:  109 IEHSLGAPVESQFDDFDIVPLASASIAQVHTATLKENGREVVIKVIRPDILPVIKADMKLIYRLA 173          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_VIBSL (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio splendidus (strain LGP32) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.358e-22
Identity = 39/142 (27.46%), Postives = 74/142 (52.11%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDG----KLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + ELD + EA N ++ R+ + G +++ +PE+  + ++   ++ E + G ++S+++ L         L E GV   F Q+    F+HAD HPGN+F + +     +   +D G++G    E +    E  L   NRD+  +A+
Sbjct:  200 LDELDLRREAANAIQLRRNFEGSEELYVPEVIPDLSSETLMVSERIYGIQVSDIETLEANGTNMKLLAERGVTVFFTQVFRDSFFHADMHPGNVFVNPENPDNPQWIGLDCGIVGTLNSEDKRYLAENLLAFFNRDYRKVAE 341          

HSP 2 Score: 58.9214 bits (141), Expect = 8.358e-22
Identity = 26/71 (36.62%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKA 267
            +E+ LG  +D  F++   EP+A+AS+ QV+ A+L++SGR + +KV RP ++  I  D+ ++H +A ++ K+
Sbjct:  109 MEKALGGRLDNWFTDFDIEPLASASIAQVHTAKLKESGREIVLKVIRPDIRPVIDADLKLMHRMARIVAKS 179          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP3 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae (strain 342) GN=ubiB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.414e-21
Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSY----DGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + +PE+Y +  +   ++ME + G  +S+V+ L         L E GV   F Q+    F+HAD HPGN+F SY    D +   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 LDELNLLRESANAIQLRRNFEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEALEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342          

HSP 2 Score: 56.225 bits (134), Expect = 1.414e-21
Identity = 25/60 (41.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP+D  F + S EP+A+AS+ QV+ ARL+++G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVDAWFDDFSVEPLASASIAQVHTARLKENGKEVVIKVIRPDILPIIKADMKLIYRLA 174          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPW (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ubiB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.840e-21
Identity = 47/140 (33.57%), Postives = 69/140 (49.29%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLF--RSYDGKLAYI--DFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  +     + IP MY E    + ++ME ++G  +S+   L         L E GV   F Q+    F+HAD HPGN+F  R +     YI  D G+MG   +E +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAIKLRNNFLDSNALYIPYMYEELCFTRLIVMERIDGVPVSDKAALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPNDPFYIGLDCGIMGTLTDEDKRYLAENFLAFFNRDYRRIAQ 341          

HSP 2 Score: 54.6842 bits (130), Expect = 1.840e-21
Identity = 30/92 (32.61%), Postives = 51/92 (55.43%), Query Frame = 1
Query:   52 TIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKARKFNTDLH--AVVDEWASSL 321
            +IEQEL  PI+  F +    P+A+AS+ QV+ A L+ +G  V +KV RP V+  +  DI ++   A  +      N  L    VV+++ +++
Sbjct:  108 SIEQELNAPIETYFDDFEDTPLASASISQVHTATLKSNGAKVVLKVLRPDVEQKVHADIQLMSQAANFLESLLGANNRLRPAEVVEDYRTTI 199          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ALISL (Probable ubiquinone biosynthesis protein ubiB OS=Aliivibrio salmonicida (strain LFI1238) GN=ubiB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.840e-21
Identity = 39/142 (27.46%), Postives = 75/142 (52.82%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDG----KLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + ELD + EA N ++ R+ + G +++ +PE+ ++ ++   ++ E + G ++S+++ L         L E GV   F Q+    F+HAD HPGN+F + D     +   +D G++G   +E +    E  L   N D+  +A+
Sbjct:  200 IDELDLRREASNAMQLRRNFEGSEELYVPEVILDVSSEHLMVSERIYGIQVSDIEQLEKNGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPDNPENPQWIGLDCGIVGTLNKEDKRYLAENLLGFFNSDYRKVAQ 341          

HSP 2 Score: 56.6102 bits (135), Expect = 1.840e-21
Identity = 26/70 (37.14%), Postives = 47/70 (67.14%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            +E  LG P++  F++    P+A+AS+ QV+ A+L++SGR + +KV RP ++  I  DI +++ +A L+ K
Sbjct:  109 MELSLGGPLENWFTDFDIVPLASASIAQVHTAKLKESGREIVLKVIRPDIRPVIEADIRLMYRMATLVEK 178          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_VIBCM (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ubiB PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.840e-21
Identity = 38/142 (26.76%), Postives = 70/142 (49.30%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDLY--------LIEGGVYWSFNQLLEKGFYHADPHPGNLF----RSYDGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + ELD + EA N ++ R+ +   +++ +PE+  +      ++ E + G ++S++  L+        L E GV   F Q+    F+HAD HPGN+F       + +   +D G++G    E +    E  L   NRD+  +A+
Sbjct:  200 LDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQ 341          

HSP 2 Score: 61.6178 bits (148), Expect = 1.840e-21
Identity = 28/71 (39.44%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKA 267
            IE+ELG P++  F +   +P+A+AS+ QV+ A+L+ +GR V +KV RP ++  I  DI +++ +A ++ KA
Sbjct:  109 IEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKA 179          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_VIBCH (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae GN=ubiB PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.840e-21
Identity = 38/142 (26.76%), Postives = 70/142 (49.30%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDLY--------LIEGGVYWSFNQLLEKGFYHADPHPGNLF----RSYDGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + ELD + EA N ++ R+ +   +++ +PE+  +      ++ E + G ++S++  L+        L E GV   F Q+    F+HAD HPGN+F       + +   +D G++G    E +    E  L   NRD+  +A+
Sbjct:  200 LDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQ 341          

HSP 2 Score: 61.6178 bits (148), Expect = 1.840e-21
Identity = 28/71 (39.44%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKA 267
            IE+ELG P++  F +   +P+A+AS+ QV+ A+L+ +GR V +KV RP ++  I  DI +++ +A ++ KA
Sbjct:  109 IEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKA 179          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_VIBC3 (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ubiB PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.840e-21
Identity = 38/142 (26.76%), Postives = 70/142 (49.30%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDLY--------LIEGGVYWSFNQLLEKGFYHADPHPGNLF----RSYDGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + ELD + EA N ++ R+ +   +++ +PE+  +      ++ E + G ++S++  L+        L E GV   F Q+    F+HAD HPGN+F       + +   +D G++G    E +    E  L   NRD+  +A+
Sbjct:  200 LDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQ 341          

HSP 2 Score: 61.6178 bits (148), Expect = 1.840e-21
Identity = 28/71 (39.44%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKA 267
            IE+ELG P++  F +   +P+A+AS+ QV+ A+L+ +GR V +KV RP ++  I  DI +++ +A ++ KA
Sbjct:  109 IEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKA 179          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPA (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ubiB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.393e-21
Identity = 47/140 (33.57%), Postives = 69/140 (49.29%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLF--RSYDGKLAYI--DFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  +     + IP MY E    + ++ME ++G  +S+   L         L E GV   F Q+    F+HAD HPGN+F  R +     YI  D G+MG   +E +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAIKLRNNFIDSNALYIPYMYEELCFTRLIVMERIDGIPVSDKVALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNVFVSREHPNDPFYIGLDCGIMGTLTDEDKRYLAENFLAFFNRDYRRIAQ 341          

HSP 2 Score: 55.4546 bits (132), Expect = 2.393e-21
Identity = 28/92 (30.43%), Postives = 53/92 (57.61%), Query Frame = 1
Query:   52 TIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKARKFNTDLH--AVVDEWASSL 321
            +IE+EL  PI+  F++    P+A+AS+ QV+ A L+ +G  V +KV RP V+  +  D+ ++   A  + +    N  L    VV+++ +++
Sbjct:  108 SIEKELNAPIERYFNDFDDTPLASASISQVHTATLKSNGAAVVLKVLRPDVEKKVHADLLLMSQAADFLERLLGANNRLRPAEVVEDYRTTI 199          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_EDWI9 (Probable ubiquinone biosynthesis protein ubiB OS=Edwardsiella ictaluri (strain 93-146) GN=ubiB PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 2.394e-21
Identity = 42/142 (29.58%), Postives = 69/142 (48.59%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSY----DGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   EA N ++ R+ +     + IPE++ +      L+ME + G  +S++  L         L E GV   F Q+    F+HAD HPGN+F SY    D +   ID G++G   +  +    E  +   NRD+  +A+
Sbjct:  200 LDELNLLREAANAIQLRRNFDASPMLYIPEVFSDYCRESVLVMERIYGVPVSDIAALRAQNTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPQDPQYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRKVAE 341          

HSP 2 Score: 57.7658 bits (138), Expect = 2.394e-21
Identity = 27/70 (38.57%), Postives = 46/70 (65.71%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            IE  LG P+++ F +   + +A+AS+ QV+ A LR++GR V +KV RP +Q  I  D+ +++ +AG + K
Sbjct:  109 IEASLGGPLEQWFDDFDSQALASASIAQVHTATLRENGREVVLKVIRPDIQPIIRADVRLMYRLAGWVPK 178          
The following BLAST results are available for this feature:
BLAST of EY650109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
UBIB_ERWT98.357e-2231.69Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_VIBSL8.358e-2227.46Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_KLEP31.414e-2129.58Probable ubiquinone biosynthesis protein ubiB OS=K... [more]
UBIB_SHEPW1.840e-2133.57Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_ALISL1.840e-2127.46Probable ubiquinone biosynthesis protein ubiB OS=A... [more]
UBIB_VIBCM1.840e-2126.76Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_VIBCH1.840e-2126.76Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_VIBC31.840e-2126.76Probable ubiquinone biosynthesis protein ubiB OS=V... [more]
UBIB_SHEPA2.393e-2133.57Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_EDWI92.394e-2129.58Probable ubiquinone biosynthesis protein ubiB OS=E... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650109 ID=EY650109; Name=EY650109; organism=Citrus sinensis; type=EST; length=880bp
CGGGCGCGTGGGCGGACGCGTGGGCCGGGGGCCGGTGGAGTTGCTTTCAA
TACAATAGAACAGGAACTTGGATTACCGATAGATGAGCTTTTCTCTGAAA
TATCGCCAGAACCTGTAGCAGCAGCGTCTCTTGGGCAGGTTTATCAAGCT
AGACTTCGTCAGAGTGGAAGAGTTGTTGCTGTCAAAGTGCGAAGACCTGG
TGTTCAGGCTGCAATTTCATTAGACATTTTCATACTGCATTTTATAGCAG
GGTTGATCCGGAAAGCTAGAAAATTCAACACTGATCTTCATGCTGTAGTT
GATGAATGGGCATCAAGTCTTTTTCGGGTGATCCCATTGAATGCAGGAGC
TGGACTATAAAATAGAAGCAAAAAATGGGCTTAAATTTAGACAACTATAT
GGGGGAATACAAGATGTTTTGATTCCAGAAATGTATGTGGAGCAAACAAC
TCGAAAGGGCCTTATTATGGAATGGGTCGAGGGGCAAAAGTTGTCTGAAG
TAAAGGATCTTTACTTAATTGAGGGAGGAGTATACTGGTCGTTCAATCAA
CTTTTGGAGAAGGGGTTTTATCATGCTGATCCACATCCGGGAAATCTTTT
TCGTTCATATGATGGGAAGCTAGCTTATATAGATTTTGGTATGATGGGTG
AATTTAAAGAAGAACTCCGTGAAAGATTTATGGAAGCTTGTCTCCATCTT
GTGAATCGGGATTTTGATGCACTGGCTAAGGATTTTGGTACTCTTGAGCT
ACCTCCCCAACTGCAGAGAGGNAGGCTGTTACAAAGCTCTACAGGGGTCT
GTCNAATGCTNGTGCCAAGGAGTCACAAATCAGCTTTTGGGGACCCTCTA
GAACTTGGAGCTACCATGTAGGGATAAGTC
back to top