EY650109

Overview
NameEY650109
Unique NameEY650109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHESM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-4) GN=ubiB PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 4.050e-21
Identity = 45/140 (32.14%), Postives = 67/140 (47.86%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDGK----LAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  +     + IP +Y E    + ++ME + G  +S++  L         L E GV   F Q+    F+HAD HPGN+F S D         +D G+MG   E  +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAIKLRNNFLDSDALYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQ 341          

HSP 2 Score: 56.9954 bits (136), Expect = 4.050e-21
Identity = 27/68 (39.71%), Postives = 43/68 (63.24%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLI 258
            IE EL  PI+  F + +  P+A+AS+ QV+ A L+ +G+ V +KV RP V+A I  D+ ++   A +I
Sbjct:  109 IETELKAPIESFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIQADLLLMSQTAKII 176          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP7 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ubiB PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.050e-21
Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSY----DGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + +PE+Y +  +   ++ME + G  +S+V+ L         L E GV   F Q+    F+HAD HPGN+F SY    D +   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 LDELNLLRESANAIQLRRNFEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEALEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342          

HSP 2 Score: 54.6842 bits (130), Expect = 4.050e-21
Identity = 24/60 (40.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F + S EP+A+AS+ QV+ ARL+++G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVETWFDDFSVEPLASASIAQVHTARLKENGKEVVIKVIRPDILPIIKADMKLIYRLA 174          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHEHH (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella halifaxensis (strain HAW-EB4) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.268e-21
Identity = 48/140 (34.29%), Postives = 69/140 (49.29%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLF--RSYDGKLAYI--DFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  +     + IP MY E    + ++ME ++G  +S+   L         L E GV   F Q+    F+HAD HPGN+F  R +     YI  D G+MG   EE +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAIKLRNNFIDSNALYIPYMYEELCFTRLIVMERIDGIPVSDKVALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPNDPLYIGLDCGIMGTLTEEDKRYLAENFLAFFNRDYRRIAQ 341          

HSP 2 Score: 52.373 bits (124), Expect = 5.268e-21
Identity = 27/92 (29.35%), Postives = 51/92 (55.43%), Query Frame = 1
Query:   52 TIEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKARKFNTDLH--AVVDEWASSL 321
            +IE EL  PI+  F++    P+A+AS+ QV+ A L+ +G  V +K+ RP V+  +  D+ ++   A  +      N  L    VV+++ +++
Sbjct:  108 SIETELNAPIESYFNDFDDIPLASASISQVHTATLKSNGAAVVLKILRPDVEQKVHADLLLMSQAADFLETLLGTNNRLRPAEVVEDYRTTI 199          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHESR (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-7) GN=ubiB PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 5.268e-21
Identity = 45/140 (32.14%), Postives = 67/140 (47.86%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDGK----LAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  +     + IP +Y E    + ++ME + G  +S++  L         L E GV   F Q+    F+HAD HPGN+F S D         +D G+MG   E  +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAIKLRNNFLDSDALYIPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQ 341          

HSP 2 Score: 56.6102 bits (135), Expect = 5.268e-21
Identity = 27/68 (39.71%), Postives = 43/68 (63.24%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLI 258
            IE EL  PI+  F + +  P+A+AS+ QV+ A L+ +G+ V +KV RP V+A I  D+ ++   A +I
Sbjct:  109 IEAELKAPIESFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIQADLLLMSQTAKVI 176          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHEDO (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=ubiB PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 5.268e-21
Identity = 43/140 (30.71%), Postives = 69/140 (49.29%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLF--RSYDGKLAYI--DFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  +     + +P +Y + +  + ++ME + G  +S++  L         L E GV   F Q+    F+HAD HPGN+F  R +     YI  D G+MG   +  +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAIKLRNNFLDSDALYVPYIYEDLSFTRLIVMERIYGIAVSDLSALKAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPDNPYYIGLDCGIMGTLTDVDKRYLAENFLAFFNRDYQRIAQ 341          

HSP 2 Score: 57.7658 bits (138), Expect = 5.268e-21
Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            IE EL   ID LF +    P+A+AS+ QV+ A L+ +G+ V +KV RP V+A I  D+ ++   A L+ +
Sbjct:  109 IETELNASIDSLFDDFDDVPLASASIAQVHSATLKSNGKAVVLKVLRPNVEALILADLQLMSHCAALLER 178          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_NEIMA (Probable ubiquinone biosynthesis protein ubiB OS=Neisseria meningitidis serogroup A GN=ubiB PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 6.863e-21
Identity = 37/135 (27.41%), Postives = 67/135 (49.63%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDLY--------LIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALA 727
            ELD   EA N  +  + +     +++P+++ +  T   L +EW++G  ++++  L         L + GV   F Q+   GF+HAD HPGN+  + D +   +DFG++G   +  +       L   NRD+  +A
Sbjct:  198 ELDLMREAANAGQLGRNFHNSNMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFRDGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVA 332          

HSP 2 Score: 56.6102 bits (135), Expect = 6.863e-21
Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            IE+ LG  I++L++E   EP+A+AS+ QV++ARL  SG  VAVKV RP +   I  D+ ++ F A  + +
Sbjct:  106 IEKSLGQSIEKLYAEFETEPIASASIAQVHKARL-HSGERVAVKVLRPNLLPLIEQDLSLMRFGAAWVER 174          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ERWCT (Probable ubiquinone biosynthesis protein ubiB OS=Erwinia carotovora subsp. atroseptica GN=ubiB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.914e-21
Identity = 44/142 (30.99%), Postives = 70/142 (49.30%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSY----DGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   EA N ++ R+ +     + +PE+Y +      L+ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY    D +   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 LDELNLLREAANAIQLRRNFENSPMLYVPEIYSDYCRESMLVMERIYGIPVSDVDALKANGTDMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFISYDHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342          

HSP 2 Score: 52.7582 bits (125), Expect = 8.914e-21
Identity = 22/61 (36.07%), Postives = 41/61 (67.21%), Query Frame = 1
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAG 252
            G+P++E F +   +P+A+AS+ QV+ ARL+ +G+ + +KV RP +   I  D+ ++  +AG
Sbjct:  115 GIPLEEWFDDFDIKPLASASIAQVHTARLKSTGKEIVIKVIRPDILPVIKADMRLMKRLAG 175          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_CITK8 (Probable ubiquinone biosynthesis protein ubiB OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=ubiB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.914e-21
Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = 2
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + +PE+Y +  ++  ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFENSPMLYVPEVYSDYCSQDMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342          

HSP 2 Score: 53.9138 bits (128), Expect = 8.914e-21
Identity = 23/60 (38.33%), Postives = 41/60 (68.33%), Query Frame = 1
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++E F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEEWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_LEPCP (Probable ubiquinone biosynthesis protein ubiB OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.922e-21
Identity = 43/140 (30.71%), Postives = 71/140 (50.71%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            ELD   EA N  + R+  GG+  +++PEM  + ++ + L+ME + G  +S+++ L         L   GV   F Q+   GF+HAD HPGN+  S      G+   +DFG++G      +E   +  L    RD+  +A+
Sbjct:  197 ELDLGREAANAAQLRRNMGGLDLIMLPEMIWDLSSAEVLVMERMHGVPISQIETLRAAGIDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIMVSTAPATFGRYIALDFGIVGTLDSRDKEYLAQNFLAFFRRDYRRVAE 336          

HSP 2 Score: 51.6026 bits (122), Expect = 8.922e-21
Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRK 264
            + Q LG PI+E+F+    +PVA+AS+ QV+   L   GR VAVKV RP V   I  D+ +L   A  + +
Sbjct:  105 VVQSLGRPIEEVFASFDADPVASASIAQVHFGVL-HDGREVAVKVLRPNVLNIIEADLALLRVAAAWLER 173          
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB9 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS195) GN=ubiB PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 1.508e-20
Identity = 44/140 (31.43%), Postives = 67/140 (47.86%), Query Frame = 2
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDGK----LAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  +     + +P +Y E    + ++ME + G  +S++  L         L E GV   F Q+    F+HAD HPGN+F S D         +D G+MG   E  +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAVKLRNNFLDSDALYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQ 341          

HSP 2 Score: 55.4546 bits (132), Expect = 1.508e-20
Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 1
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLI 258
            IE EL  PI+ LF + +  P+A+AS+ QV+ A L+ +G+ V +KV RP V+  I  D+ ++   A LI
Sbjct:  109 IEAELKAPIESLFDDFNETPLASASISQVHTATLKSNGKDVVLKVLRPNVETKIQADLQLMSQTAKLI 176          
The following BLAST results are available for this feature:
BLAST of EY650109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
UBIB_SHESM4.050e-2132.14Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_KLEP74.050e-2129.58Probable ubiquinone biosynthesis protein ubiB OS=K... [more]
UBIB_SHEHH5.268e-2134.29Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHESR5.268e-2132.14Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_SHEDO5.268e-2130.71Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_NEIMA6.863e-2127.41Probable ubiquinone biosynthesis protein ubiB OS=N... [more]
UBIB_ERWCT8.914e-2130.99Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_CITK88.914e-2129.58Probable ubiquinone biosynthesis protein ubiB OS=C... [more]
UBIB_LEPCP8.922e-2130.71Probable ubiquinone biosynthesis protein ubiB OS=L... [more]
UBIB_SHEB91.508e-2031.43Probable ubiquinone biosynthesis protein ubiB OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650109 ID=EY650109; Name=EY650109; organism=Citrus sinensis; type=EST; length=880bp
CGGGCGCGTGGGCGGACGCGTGGGCCGGGGGCCGGTGGAGTTGCTTTCAA
TACAATAGAACAGGAACTTGGATTACCGATAGATGAGCTTTTCTCTGAAA
TATCGCCAGAACCTGTAGCAGCAGCGTCTCTTGGGCAGGTTTATCAAGCT
AGACTTCGTCAGAGTGGAAGAGTTGTTGCTGTCAAAGTGCGAAGACCTGG
TGTTCAGGCTGCAATTTCATTAGACATTTTCATACTGCATTTTATAGCAG
GGTTGATCCGGAAAGCTAGAAAATTCAACACTGATCTTCATGCTGTAGTT
GATGAATGGGCATCAAGTCTTTTTCGGGTGATCCCATTGAATGCAGGAGC
TGGACTATAAAATAGAAGCAAAAAATGGGCTTAAATTTAGACAACTATAT
GGGGGAATACAAGATGTTTTGATTCCAGAAATGTATGTGGAGCAAACAAC
TCGAAAGGGCCTTATTATGGAATGGGTCGAGGGGCAAAAGTTGTCTGAAG
TAAAGGATCTTTACTTAATTGAGGGAGGAGTATACTGGTCGTTCAATCAA
CTTTTGGAGAAGGGGTTTTATCATGCTGATCCACATCCGGGAAATCTTTT
TCGTTCATATGATGGGAAGCTAGCTTATATAGATTTTGGTATGATGGGTG
AATTTAAAGAAGAACTCCGTGAAAGATTTATGGAAGCTTGTCTCCATCTT
GTGAATCGGGATTTTGATGCACTGGCTAAGGATTTTGGTACTCTTGAGCT
ACCTCCCCAACTGCAGAGAGGNAGGCTGTTACAAAGCTCTACAGGGGTCT
GTCNAATGCTNGTGCCAAGGAGTCACAAATCAGCTTTTGGGGACCCTCTA
GAACTTGGAGCTACCATGTAGGGATAAGTC
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