EY650109

Overview
NameEY650109
Unique NameEY650109
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHEON (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella oneidensis GN=ubiB PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 4.316e-20
Identity = 44/140 (31.43%), Postives = 67/140 (47.86%), Query Frame = 2 
Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDGK----LAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            EL+ K+EA N +K R  +     + IP +Y E    + ++ME + G  +S++  L         L E GV   F Q+    F+HAD HPGN+F S +         +D G+MG   E  +    E  L   NRD+  +A+
Sbjct:  202 ELNLKLEALNAIKLRNNFIDSDALYIPYVYEEFCYPRLMVMERIYGIPVSDIVALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRENPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQ 341

HSP 2 Score: 54.6842 bits (130), Expect = 4.316e-20
Identity = 26/68 (38.24%), Postives = 42/68 (61.76%), Query Frame = 1 
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLI 258
            IE EL  PI+  F + +  P+A+AS+ QV+ A L+ +G+ V +KV RP V+  I  D+ ++   A +I
Sbjct:  109 IEAELKAPIETFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVETKIQADLLLMSQTAKVI 176
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_PHOPR (Probable ubiquinone biosynthesis protein ubiB OS=Photobacterium profundum GN=ubiB PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 4.316e-20
Identity = 39/142 (27.46%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDLY--------LIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYDG----KLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   EA N ++ R+ +     + +PEM+ + ++   L+ME + G ++S++  L         L E  V   F Q+    F+HAD HPGN+F SY+     +   +D G++G    + +    E  L   +RD+  +A+
Sbjct:  201 LDELNMMREAANSIQLRRNFEDSDTLYVPEMFTDYSSTNLLVMERIYGIQVSDIDALIANGTNMKLLSENAVNIFFTQVFRDSFFHADMHPGNIFVSYENPETPQWIALDCGIVGTLNRDDKRYLAENLLAFFHRDYRKVAE 342

HSP 2 Score: 53.9138 bits (128), Expect = 4.316e-20
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 1 
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFIL----HFIAGLIRKAR 270
            +E  LG PI+  F +    P+A+AS+ QV+ A L+++GR V +KV RP +   I  DI ++    H +A L+ +AR
Sbjct:  110 MELSLGGPIETWFDDFDETPLASASIAQVHTATLKENGREVVLKVIRPDILPVIQADIKLMYRMAHIVARLLPEAR 185
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_PHOLL (Probable ubiquinone biosynthesis protein ubiB OS=Photorhabdus luminescens subsp. laumondii GN=ubiB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.301e-20
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSY----DGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   EA N ++ R+ +     + +PE+Y +      L+ME V G  +S+++ L         L E GV   F Q+    F+HAD HPGN+F SY    D     ID+G++G   ++ +    E  +   NRD+  +A+
Sbjct:  200 IDELNLLREAANAIQLRRNFENSSTLYVPEIYSDYCRENVLVMERVYGIPVSDIEALEAQNTNMRLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPFYIGIDYGIVGSLNKDDKRYLAENFIAFFNRDYRKVAE 341

HSP 2 Score: 48.9062 bits (115), Expect = 7.301e-20
Identity = 23/68 (33.82%), Postives = 42/68 (61.76%), Query Frame = 1 
Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLI 258
            IE  LG  ++  F +  P  +A+AS+ QV+ ARL+++G+ + +KV RP +   I  DI +++ +A  +
Sbjct:  109 IETALGGALETWFDDFEPIALASASIAQVHTARLKENGQEIVIKVIRPDILPIIKADIRLMYRLANWV 176
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_PECCP (Probable ubiquinone biosynthesis protein ubiB OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=ubiB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.301e-20
Identity = 44/142 (30.99%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSY----DGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   EA N ++ R+ +     + +PE+Y +  +   L+ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY    D +   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 LDELNLLREAANAIQLRRNFENSPMLYVPEIYSDYCSEGMLVMERIYGIPVSDVDALKANGTDMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFISYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 49.6766 bits (117), Expect = 7.301e-20
Identity = 21/61 (34.43%), Postives = 40/61 (65.57%), Query Frame = 1 
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAG 252
            G+P++E F +   +P+A+AS+ QV+ A L+ +G+ + +KV RP +   I  D+ ++  +AG
Sbjct:  115 GIPLEEWFDDFDIKPLASASIAQVHTACLKSTGKEIVIKVIRPDILPVIKADMRLMKRLAG 175
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ENT38 (Probable ubiquinone biosynthesis protein ubiB OS=Enterobacter sp. (strain 638) GN=ubiB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 7.301e-20
Identity = 42/142 (29.58%), Postives = 72/142 (50.70%), Query Frame = 2 
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSY----DGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + +PE+Y +  ++  ++ME + G  +S++  L         L E GV   F Q+    F+HAD HPGN+F SY    D K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFENSPMLYVPEVYSDYCSQNMMVMERIYGIPVSDIVALENQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 50.0618 bits (118), Expect = 7.301e-20
Identity = 22/66 (33.33%), Postives = 45/66 (68.18%), Query Frame = 1 
Query:   55 IEQELG-LPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            IE+ +G +P++  F +   +P+A+AS+ QV+ ARL+++G+ + +KV RP +   I  D+ +++ +A
Sbjct:  109 IEEAMGNIPVETWFDDFDIKPLASASIAQVHTARLKENGKEIVIKVIRPDILPVIRADMKLIYRLA 174
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SHISS (Probable ubiquinone biosynthesis protein ubiB OS=Shigella sonnei (strain Ss046) GN=ubiB PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.495e-20
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 9.495e-20
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1 
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOUT (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain UTI89 / UPEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.495e-20
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 9.495e-20
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1 
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOSM (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.495e-20
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 9.495e-20
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1 
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOL6 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O6 GN=ubiB PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.495e-20
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 9.495e-20
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1 
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
[Close]
BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOL5 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.495e-20
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2 
Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVATLEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 9.495e-20
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1 
Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174
The following BLAST results are available for this feature:
BLAST of EY650109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166
Match NameE-valueIdentityDescription
UBIB_SHEON4.316e-2031.43Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_PHOPR4.316e-2027.46Probable ubiquinone biosynthesis protein ubiB OS=P... [more]
UBIB_PHOLL7.301e-2030.28Probable ubiquinone biosynthesis protein ubiB OS=P... [more]
UBIB_PECCP7.301e-2030.99Probable ubiquinone biosynthesis protein ubiB OS=P... [more]
UBIB_ENT387.301e-2029.58Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_SHISS9.495e-2030.28Probable ubiquinone biosynthesis protein ubiB OS=S... [more]
UBIB_ECOUT9.495e-2030.28Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_ECOSM9.495e-2030.28Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_ECOL69.495e-2030.28Probable ubiquinone biosynthesis protein ubiB OS=E... [more]
UBIB_ECOL59.495e-2030.28Probable ubiquinone biosynthesis protein ubiB OS=E... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650109 ID=EY650109; Name=EY650109; organism=Citrus sinensis; type=EST; length=880bp
CGGGCGCGTGGGCGGACGCGTGGGCCGGGGGCCGGTGGAGTTGCTTTCAA
TACAATAGAACAGGAACTTGGATTACCGATAGATGAGCTTTTCTCTGAAA
TATCGCCAGAACCTGTAGCAGCAGCGTCTCTTGGGCAGGTTTATCAAGCT
AGACTTCGTCAGAGTGGAAGAGTTGTTGCTGTCAAAGTGCGAAGACCTGG
TGTTCAGGCTGCAATTTCATTAGACATTTTCATACTGCATTTTATAGCAG
GGTTGATCCGGAAAGCTAGAAAATTCAACACTGATCTTCATGCTGTAGTT
GATGAATGGGCATCAAGTCTTTTTCGGGTGATCCCATTGAATGCAGGAGC
TGGACTATAAAATAGAAGCAAAAAATGGGCTTAAATTTAGACAACTATAT
GGGGGAATACAAGATGTTTTGATTCCAGAAATGTATGTGGAGCAAACAAC
TCGAAAGGGCCTTATTATGGAATGGGTCGAGGGGCAAAAGTTGTCTGAAG
TAAAGGATCTTTACTTAATTGAGGGAGGAGTATACTGGTCGTTCAATCAA
CTTTTGGAGAAGGGGTTTTATCATGCTGATCCACATCCGGGAAATCTTTT
TCGTTCATATGATGGGAAGCTAGCTTATATAGATTTTGGTATGATGGGTG
AATTTAAAGAAGAACTCCGTGAAAGATTTATGGAAGCTTGTCTCCATCTT
GTGAATCGGGATTTTGATGCACTGGCTAAGGATTTTGGTACTCTTGAGCT
ACCTCCCCAACTGCAGAGAGGNAGGCTGTTACAAAGCTCTACAGGGGTCT
GTCNAATGCTNGTGCCAAGGAGTCACAAATCAGCTTTTGGGGACCCTCTA
GAACTTGGAGCTACCATGTAGGGATAAGTC
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