EY650109 | Citrus Genome Database

Overview


Name	EY650109
Unique Name	EY650109
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	880

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ESCF3 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFDIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOSE (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain SE11) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOLU (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOLI (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain K12) GN=ubiB PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOLC (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOHS (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O9:H4 (strain HS) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECODH (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain K12 / DH10B) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECOBW (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain K12 / BW2952) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECO8A (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O8 (strain IAI1) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECO7I (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

The following BLAST results are available for this feature:

BLAST of EY650109 vs. ExPASy Swiss-Prot

BLAST of EY650109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166


Match Name	E-value	Identity	Description
UBIB_ESCF3	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECOSE	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECOLU	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECOLI	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECOLC	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECOHS	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECODH	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECOBW	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECO8A	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECO7I	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-100-007-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY650109 ID=EY650109; Name=EY650109; organism=Citrus sinensis; type=EST; length=880bp
CGGGCGCGTGGGCGGACGCGTGGGCCGGGGGCCGGTGGAGTTGCTTTCAA
TACAATAGAACAGGAACTTGGATTACCGATAGATGAGCTTTTCTCTGAAA
TATCGCCAGAACCTGTAGCAGCAGCGTCTCTTGGGCAGGTTTATCAAGCT
AGACTTCGTCAGAGTGGAAGAGTTGTTGCTGTCAAAGTGCGAAGACCTGG
TGTTCAGGCTGCAATTTCATTAGACATTTTCATACTGCATTTTATAGCAG
GGTTGATCCGGAAAGCTAGAAAATTCAACACTGATCTTCATGCTGTAGTT
GATGAATGGGCATCAAGTCTTTTTCGGGTGATCCCATTGAATGCAGGAGC
TGGACTATAAAATAGAAGCAAAAAATGGGCTTAAATTTAGACAACTATAT
GGGGGAATACAAGATGTTTTGATTCCAGAAATGTATGTGGAGCAAACAAC
TCGAAAGGGCCTTATTATGGAATGGGTCGAGGGGCAAAAGTTGTCTGAAG
TAAAGGATCTTTACTTAATTGAGGGAGGAGTATACTGGTCGTTCAATCAA
CTTTTGGAGAAGGGGTTTTATCATGCTGATCCACATCCGGGAAATCTTTT
TCGTTCATATGATGGGAAGCTAGCTTATATAGATTTTGGTATGATGGGTG
AATTTAAAGAAGAACTCCGTGAAAGATTTATGGAAGCTTGTCTCCATCTT
GTGAATCGGGATTTTGATGCACTGGCTAAGGATTTTGGTACTCTTGAGCT
ACCTCCCCAACTGCAGAGAGGNAGGCTGTTACAAAGCTCTACAGGGGTCT
GTCNAATGCTNGTGCCAAGGAGTCACAAATCAGCTTTTGGGGACCCTCTA
GAACTTGGAGCTACCATGTAGGGATAAGTC