EY650109 | Citrus Genome Database

Overview


Name	EY650109
Unique Name	EY650109
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	880

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECO5E (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECO57 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O157:H7 GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECO55 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli (strain 55989 / EAEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECO27 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_ECO24 (Probable ubiquinone biosynthesis protein ubiB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ubiB PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.235e-19
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  +   ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F SY+     K   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 51.2174 bits (121), Expect = 1.235e-19
Identity = 22/60 (36.67%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP++  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIKADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_VIBVY (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio vulnificus (strain YJ016) GN=ubiB PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.235e-19
Identity = 39/142 (27.46%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLF----RSYDGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + ELD + EA N ++ R+ +   +++ +PE+Y + +    ++ E + G ++S++  L         L E GV   F Q+    F+HAD HPGN+F       + +   +D G++G    E +    E  L   NRD+  +A+
Sbjct:  200 LDELDLRREAANAIQLRRNFTDSEELYVPEVYPDFSNETVMVSERIYGIQVSDITGLKANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPEHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAE 341

HSP 2 Score: 53.1434 bits (126), Expect = 1.235e-19
Identity = 25/71 (35.21%), Postives = 46/71 (64.79%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKA 267
            +EQ LG P++  FS+    P+A+AS+ QV+ A+L+ + + V +KV RP ++  I  D+ ++  +A ++ KA
Sbjct:  109 MEQALGGPLETWFSDFDLVPLASASIAQVHTAKLKTTNQEVVLKVIRPDIRPIIDADLKLMRRMASIVAKA 179

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SALG2 (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=ubiB PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.606e-19
Identity = 41/142 (28.87%), Postives = 72/142 (50.70%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  ++  ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F S++     +   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 53.1434 bits (126), Expect = 1.606e-19
Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP+D  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVDAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_SALEP (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella enteritidis PT4 (strain P125109) GN=ubiB PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.606e-19
Identity = 41/142 (28.87%), Postives = 72/142 (50.70%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLFRSYD----GKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + EL+   E+ N ++ R+ +     + IPE+Y +  ++  ++ME + G  +S+V  L         L E GV   F Q+    F+HAD HPGN+F S++     +   ID G++G   +E +    E  +   NRD+  +A+
Sbjct:  201 IDELNLLRESANAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAE 342

HSP 2 Score: 53.1434 bits (126), Expect = 1.606e-19
Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 1

Query:   70 GLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIA 249
            GLP+D  F +   +P+A+AS+ QV+ ARL+ +G+ V +KV RP +   I  D+ +++ +A
Sbjct:  115 GLPVDAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_HAES1 (Probable ubiquinone biosynthesis protein ubiB OS=Haemophilus somnus (strain 129Pt) GN=ubiB PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.089e-19
Identity = 44/140 (31.43%), Postives = 71/140 (50.71%), Query Frame = 2

Query:  347 ELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDLY--------LIEGGVYWSFNQLLEKGFYHADPHPGNLFRS--YDGKLAY--IDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            ELD ++E  N +K R+ +     + IP+MY     +  ++ME + G  +S+V+ L         L E GV   F Q+    F+HAD HPGN+F +  Y     Y  ID G++G+  E  +    E+ +   NRD+  +A+
Sbjct:  205 ELDLRVEMANAIKLRENFLDSPMLYIPKMYEAFCHKNVIVMERIYGIPVSDVETLQRNGTDMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVNPHYPENPQYIGIDCGIVGKLNESDKRYLAESFVAFFNRDYRRVAQ 344

HSP 2 Score: 49.6766 bits (117), Expect = 2.089e-19
Identity = 30/94 (31.91%), Postives = 53/94 (56.38%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLR---QSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKARKFNTDLHA--VVDEWASSL 321
            IEQ LG  ++  F++     +A+AS+ QV+ A+L+   +  + V +KV RP +Q  I  D+  ++ +AGL+ K  +    L A  V+ E+  +L
Sbjct:  109 IEQALGSSLENWFTDFDENALASASIAQVHTAKLKLGEEQEKEVVIKVLRPNIQPQIEADLSWMYKLAGLLPKLFREGYRLRAVEVIQEYEKTL 202

BLAST of EY650109 vs. ExPASy Swiss-Prot
Match: UBIB_VIBVU (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio vulnificus GN=ubiB PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 2.089e-19
Identity = 39/142 (27.46%), Postives = 71/142 (50.00%), Query Frame = 2

Query:  341 MQELDYKIEAKNGLKFRQLYGGIQDVLIPEMYVEQTTRKGLIMEWVEGQKLSEVKDL--------YLIEGGVYWSFNQLLEKGFYHADPHPGNLF----RSYDGKLAYIDFGMMGEFKEELRERFMEACLHLVNRDFDALAK 730
            + ELD + EA N ++ R+ +   +++ +PE+Y + +    ++ E + G ++S++  L         L E GV   F Q+    F+HAD HPGN+F       + +   +D G++G    E +    E  L   NRD+  +A+
Sbjct:  200 LDELDLRREAANAIQLRRNFTDSEELYVPEVYPDFSNETVMVSERIYGIQVSDIAGLKANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPEHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAE 341

HSP 2 Score: 52.373 bits (124), Expect = 2.089e-19
Identity = 25/71 (35.21%), Postives = 46/71 (64.79%), Query Frame = 1

Query:   55 IEQELGLPIDELFSEISPEPVAAASLGQVYQARLRQSGRVVAVKVRRPGVQAAISLDIFILHFIAGLIRKA 267
            +EQ LG P++  FS+    P+A+AS+ QV+ A+L+ + + V +KV RP ++  I  D+ ++  +A ++ KA
Sbjct:  109 MEQALGGPLETWFSDFDLVPLASASIAQVHTAKLKTTNQEVVLKVIRPDIRPIIDADLKLMRRMARIVAKA 179

The following BLAST results are available for this feature:

BLAST of EY650109 vs. ExPASy Swiss-Prot

BLAST of EY650109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 166


Match Name	E-value	Identity	Description
UBIB_ECO5E	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECO57	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECO55	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECO27	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_ECO24	1.235e-19	30.28	Probable ubiquinone biosynthesis protein ubiB OS=E...	[more]
UBIB_VIBVY	1.235e-19	27.46	Probable ubiquinone biosynthesis protein ubiB OS=V...	[more]
UBIB_SALG2	1.606e-19	28.87	Probable ubiquinone biosynthesis protein ubiB OS=S...	[more]
UBIB_SALEP	1.606e-19	28.87	Probable ubiquinone biosynthesis protein ubiB OS=S...	[more]
UBIB_HAES1	2.089e-19	31.43	Probable ubiquinone biosynthesis protein ubiB OS=H...	[more]
UBIB_VIBVU	2.089e-19	27.46	Probable ubiquinone biosynthesis protein ubiB OS=V...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-100-007-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY650109 ID=EY650109; Name=EY650109; organism=Citrus sinensis; type=EST; length=880bp
CGGGCGCGTGGGCGGACGCGTGGGCCGGGGGCCGGTGGAGTTGCTTTCAA
TACAATAGAACAGGAACTTGGATTACCGATAGATGAGCTTTTCTCTGAAA
TATCGCCAGAACCTGTAGCAGCAGCGTCTCTTGGGCAGGTTTATCAAGCT
AGACTTCGTCAGAGTGGAAGAGTTGTTGCTGTCAAAGTGCGAAGACCTGG
TGTTCAGGCTGCAATTTCATTAGACATTTTCATACTGCATTTTATAGCAG
GGTTGATCCGGAAAGCTAGAAAATTCAACACTGATCTTCATGCTGTAGTT
GATGAATGGGCATCAAGTCTTTTTCGGGTGATCCCATTGAATGCAGGAGC
TGGACTATAAAATAGAAGCAAAAAATGGGCTTAAATTTAGACAACTATAT
GGGGGAATACAAGATGTTTTGATTCCAGAAATGTATGTGGAGCAAACAAC
TCGAAAGGGCCTTATTATGGAATGGGTCGAGGGGCAAAAGTTGTCTGAAG
TAAAGGATCTTTACTTAATTGAGGGAGGAGTATACTGGTCGTTCAATCAA
CTTTTGGAGAAGGGGTTTTATCATGCTGATCCACATCCGGGAAATCTTTT
TCGTTCATATGATGGGAAGCTAGCTTATATAGATTTTGGTATGATGGGTG
AATTTAAAGAAGAACTCCGTGAAAGATTTATGGAAGCTTGTCTCCATCTT
GTGAATCGGGATTTTGATGCACTGGCTAAGGATTTTGGTACTCTTGAGCT
ACCTCCCCAACTGCAGAGAGGNAGGCTGTTACAAAGCTCTACAGGGGTCT
GTCNAATGCTNGTGCCAAGGAGTCACAAATCAGCTTTTGGGGACCCTCTA
GAACTTGGAGCTACCATGTAGGGATAAGTC