EY650105

Overview
NameEY650105
Unique NameEY650105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB4_ORYSJ (Nuclear transcription factor Y subunit B-4 OS=Oryza sativa subsp. japonica GN=NFYB4 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.474e-37
Identity = 70/95 (73.68%), Postives = 87/95 (91.58%), Query Frame = 1 
Query:  319 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 603
            +EQDRFLPIAN+ RIM++A+P N KI+KD+KE+VQECVSEFISF+T EASDKC +EKRKTINGDDL+W+M TLGFE+YVEPLK+YL+ +RE EG+
Sbjct:   21 KEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGD 115
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB6_ARATH (Nuclear transcription factor Y subunit B-6 OS=Arabidopsis thaliana GN=NFYB6 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 1.011e-36
Identity = 68/104 (65.38%), Postives = 91/104 (87.50%), Query Frame = 1 
Query:  292 HGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 603
            +G   E + REQDRF+PIANV RIM++ LPA+AKIS D+KET+QECVSE+ISF+TGEA+++CQRE+RKTI  +D+LWAM+ LGF++Y+EPL +YL R+RE+EGE
Sbjct:   48 NGGEEECTVREQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSKLGFDDYIEPLTLYLHRYRELEGE 151
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB5_ARATH (Nuclear transcription factor Y subunit B-5 OS=Arabidopsis thaliana GN=NFYB5 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.551e-36
Identity = 70/95 (73.68%), Postives = 81/95 (85.26%), Query Frame = 1 
Query:  319 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 603
            +EQDR LPIANV RIMK  LPANAK+SK+AKET+QECVSEFISFVTGEASDKC +EKRKT+NGDD+ WAM  LGF++Y   LK YL R+R +EGE
Sbjct:   50 KEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWAMANLGFDDYAAQLKKYLHRYRVLEGE 144
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB_RAT (Nuclear transcription factor Y subunit beta OS=Rattus norvegicus GN=Nfyb PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.546e-35
Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 1 
Query:  253 DSDNDSGGER*RQHGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGE 603
            D   DS  +    +GS      REQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFISF+T EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GE
Sbjct:   33 DDTEDSMNDHEDTNGSKESF--REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGE 148
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB_MOUSE (Nuclear transcription factor Y subunit beta OS=Mus musculus GN=Nfyb PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.546e-35
Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 1 
Query:  253 DSDNDSGGER*RQHGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGE 603
            D   DS  +    +GS      REQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFISF+T EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GE
Sbjct:   33 DDTEDSMNDHEDTNGSKESF--REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGE 148
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB_HUMAN (Nuclear transcription factor Y subunit beta OS=Homo sapiens GN=NFYB PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.546e-35
Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 1 
Query:  253 DSDNDSGGER*RQHGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGE 603
            D   DS  +    +GS      REQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFISF+T EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GE
Sbjct:   33 DDTEDSMNDHEDTNGSKESF--REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGE 148
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB_HORSE (Nuclear transcription factor Y subunit beta OS=Equus caballus GN=NFYB PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.546e-35
Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 1 
Query:  253 DSDNDSGGER*RQHGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGE 603
            D   DS  +    +GS      REQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFISF+T EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GE
Sbjct:   33 DDTEDSMNDHEDTNGSKESF--REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGE 148
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB_CHICK (Nuclear transcription factor Y subunit beta OS=Gallus gallus GN=NFYB PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 5.546e-35
Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 1 
Query:  253 DSDNDSGGER*RQHGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGE 603
            D   DS  +    +GS      REQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFISF+T EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GE
Sbjct:   31 DDTEDSMNDHEDTNGSKESF--REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGE 146
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB_BOVIN (Nuclear transcription factor Y subunit beta OS=Bos taurus GN=NFYB PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.546e-35
Identity = 75/118 (63.56%), Postives = 93/118 (78.81%), Query Frame = 1 
Query:  253 DSDNDSGGER*RQHGSSRELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGE 603
            D   DS  +    +GS      REQD +LPIANV+RIMK A+P   KI+KDAKE VQECVSEFISF+T EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GE
Sbjct:   33 DDTEDSMNDHEDTNGSKESF--REQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGE 148
[Close]
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB_PETMA (Nuclear transcription factor Y subunit beta OS=Petromyzon marinus GN=NFYB PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.366e-33
Identity = 68/96 (70.83%), Postives = 87/96 (90.62%), Query Frame = 1 
Query:  319 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGE 603
            REQD +LPIANV+RIMK ++P++ KI+KDAKE VQECVSEFISF+T EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK YLQ++RE M+GE
Sbjct:   54 REQDIYLPIANVARIMKTSIPSSGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKQYLQKYRESMKGE 149
The following BLAST results are available for this feature:
BLAST of EY650105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NFYB4_ORYSJ3.474e-3773.68Nuclear transcription factor Y subunit B-4 OS=Oryz... [more]
NFYB6_ARATH1.011e-3665.38Nuclear transcription factor Y subunit B-6 OS=Arab... [more]
NFYB5_ARATH6.551e-3673.68Nuclear transcription factor Y subunit B-5 OS=Arab... [more]
NFYB_RAT5.546e-3563.56Nuclear transcription factor Y subunit beta OS=Rat... [more]
NFYB_MOUSE5.546e-3563.56Nuclear transcription factor Y subunit beta OS=Mus... [more]
NFYB_HUMAN5.546e-3563.56Nuclear transcription factor Y subunit beta OS=Hom... [more]
NFYB_HORSE5.546e-3563.56Nuclear transcription factor Y subunit beta OS=Equ... [more]
NFYB_CHICK5.546e-3563.56Nuclear transcription factor Y subunit beta OS=Gal... [more]
NFYB_BOVIN5.546e-3563.56Nuclear transcription factor Y subunit beta OS=Bos... [more]
NFYB_PETMA1.366e-3370.83Nuclear transcription factor Y subunit beta OS=Pet... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650105 ID=EY650105; Name=EY650105; organism=Citrus sinensis; type=EST; length=885bp
CTTGAGTTTTGTCTTCAAAGTTTTAATGGGTGATGATTTTACCTGAAATC
CAAAGGAATTTTTTTTTTTTTAAAAAAAAAAAATTGTGCTTCAAGCTAGC
TAGCCTTATAATTAACGTTTTCATGCATGCACTTAGAATTCAGTAAAAGC
TTCAAATTTTCTTCCGCAAAGCCTTCAATTTAAGCACCACCCTTCACCAG
AAGTACATAAAAAGCTTTTTAATTTAAGTTCATCTCCAAAATAATCATGG
GAGACTCGGATAATGATTCGGGAGGTGAAAGATAGAGGCAGCACGGCTCA
TCCAGGGAGCTGTCGCCGAGGGAGCAGGACAGGTTCCTGCCGATAGCAAA
CGTGAGCAGGATCATGAAAAAGGCCCTGCCCGCGAATGCCAAGATATCCA
AGGATGCCAAGGAGACCGTGCAAGAGTGCGTCTCCGAGTTCATTAGCTTC
GTCACCGGCGAGGCCTCCGATAAGTGCCAGAGGGAGAAGCGAAAGACCAT
CAATGGAGACGATCTCCTGTGGGCAATGACCACTCTGGGCTTCGAGGAAT
ACGTGGAGCCGCTCAAGGTTTACCTGCAGAGGTTCAGGGAGATGGAAGGG
GAGTAAATGGCGCGTGACAAGGACGCGCCGGCAGGTCACTGTGTTGGCGG
TGCGATTGGCGGATACTACGGCGGGATGATGATGATGGGACACNNGAGGT
AACTCAATCAGGGGACGTGATGGCTCTGGTGGGTTTATCATCAATGGCTT
AGTGCCCAAGGGTGGGCCCTACATTGGNTGTAGCTTAGTACGCCANATAG
GGGAAAGAGTCTGGAGGTGGATCTCTGAGACGGGAACCCGTACGGTGAAA
TNCGGGGGACATGGGATTGAACTCTGGGGCTACTN
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