EY650105

Overview
NameEY650105
Unique NameEY650105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB9_ARATH (Nuclear transcription factor Y subunit B-9 OS=Arabidopsis thaliana GN=NFYB9 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.043e-33
Identity = 63/93 (67.74%), Postives = 84/93 (90.32%), Query Frame = 1
Query:  319 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME 597
            REQD+++PIANV RIM+K LP++AKIS DAKET+QECVSE+ISFVTGEA+++CQRE+RKTI  +D+LWAM+ LGF+ YV+PL V++ R+RE+E
Sbjct:   28 REQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTITAEDILWAMSKLGFDNYVDPLTVFINRYREIE 120          
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: HAP3_YEAST (Transcriptional activator HAP3 OS=Saccharomyces cerevisiae GN=HAP3 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 9.162e-30
Identity = 64/114 (56.14%), Postives = 84/114 (73.68%), Query Frame = 1
Query:  259 DNDSGGER*RQHGSSRELSP-REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME 597
            D    G      GS +++S  REQDR+LPI NV+R+MK  LP +AK+SKDAKE +QECVSE ISFVT EASD+C  +KRKTING+D+L ++  LGFE Y E LK+YL ++R+ +
Sbjct:   15 DTQENGGNASSSGSLQQISTLREQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQECVSELISFVTSEASDRCAADKRKTINGEDILISLHALGFENYAEVLKIYLAKYRQQQ 128          
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB4_ARATH (Nuclear transcription factor Y subunit B-4 OS=Arabidopsis thaliana GN=NFYB4 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.547e-29
Identity = 58/94 (61.70%), Postives = 77/94 (81.91%), Query Frame = 1
Query:  322 EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREMEGE 603
            ++DR LPIANV R+MK+ LP+NAKISK+AK+TVQEC +EFISFVT EAS+KC RE RKT+NGDD+ WA++TLG + Y + +  +L ++RE E E
Sbjct:    3 DEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRKTVNGDDIWWALSTLGLDNYADAVGRHLHKYREAERE 96          
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: HAP3_KLULA (Transcriptional activator HAP3 OS=Kluyveromyces lactis GN=HAP3 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.257e-28
Identity = 63/114 (55.26%), Postives = 84/114 (73.68%), Query Frame = 1
Query:  259 DNDSGGER*RQHGSS-RELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME 597
            D ++  E+  +H +   EL+  EQDR+LPI NV+R+MK  LPA  K+SKDAKE +QECVSEFISFVT EA D+C   KRKTING+D+L ++  LGFE Y E LK+YL ++R+ +
Sbjct:    2 DTETEAEKQERHNNYLNELA--EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTINGEDILLSLHALGFENYAEVLKIYLAKYRQQQ 113          
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: HAP3_SCHPO (Transcriptional activator hap3 OS=Schizosaccharomyces pombe GN=hap3 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.849e-28
Identity = 60/87 (68.97%), Postives = 74/87 (85.06%), Query Frame = 1
Query:  337 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME 597
            LPIANV+RIMK ALP NAKISK+AK+ VQ+CVSEFISFVTGEAS++C +EKRKTI G+D+L A+ TLGFE Y E LK+ L ++RE +
Sbjct:   12 LPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDVLLALNTLGFENYAEVLKISLTKYREQQ 98          
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB_XENLA (Nuclear transcription factor Y subunit beta (Fragment) OS=Xenopus laevis GN=nfyb PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.953e-21
Identity = 47/63 (74.60%), Postives = 59/63 (93.65%), Query Frame = 1
Query:  418 VQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFRE-MEGE 603
            VQECVSEFISF+T EAS++C +EKRKTING+D+L+AM+TLGF+ YVEPLK+YLQ+FRE M+GE
Sbjct:    1 VQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFREAMKGE 63          
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: NFYB1_ORYSJ (Nuclear transcription factor Y subunit B-1 OS=Oryza sativa subsp. japonica GN=NFYB1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.881e-15
Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 1
Query:  337 LPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME 597
            LP+AN+ R++KK LP  AKI   AK    +C  EF+ FV  EAS+K + E R+T+  +D L +   LGF+ YV+P+  Y+  +RE E
Sbjct:   34 LPMANLVRLIKKVLPGKAKIGGAAKGLTHDCAVEFVGFVGDEASEKAKAEHRRTVAPEDYLGSFGDLGFDRYVDPMDAYIHGYREFE 120          
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: DPOE3_RAT (DNA polymerase epsilon subunit 3 OS=Rattus norvegicus GN=Pole3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  310 LSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRF-REMEG-----E*MARDKD 624
            ++ R +D  LP A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT+N  D+L AM  + F+ +V PLK  L+ + RE +G     E   +DKD
Sbjct:    1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKD 111          
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: DPOE3_PONAB (DNA polymerase epsilon subunit 3 OS=Pongo abelii GN=POLE3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12
Identity = 41/111 (36.94%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  310 LSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRF-REMEG-----E*MARDKD 624
            ++ R +D  LP A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT+N  D+L AM  + F+ +V PLK  L+ + RE +G     E   +DKD
Sbjct:    1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKD 111          
BLAST of EY650105 vs. ExPASy Swiss-Prot
Match: DPOE3_MOUSE (DNA polymerase epsilon subunit 3 OS=Mus musculus GN=Pole3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.051e-12
Identity = 39/111 (35.14%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  310 LSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKVYLQRFREME------GE*MARDKD 624
            ++ R +D  LP A ++RI+K+ALP    ISK+A+  +    S F+ + T  A++   + KRKT+N  D+L AM  + F+ ++ PLK  L+ +R  E       E   +DKD
Sbjct:    1 MAERPEDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLNASDVLSAMEEMEFQRFITPLKEALEAYRRDEKGKKEASEQKKKDKD 111          
The following BLAST results are available for this feature:
BLAST of EY650105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NFYB9_ARATH3.043e-3367.74Nuclear transcription factor Y subunit B-9 OS=Arab... [more]
HAP3_YEAST9.162e-3056.14Transcriptional activator HAP3 OS=Saccharomyces ce... [more]
NFYB4_ARATH4.547e-2961.70Nuclear transcription factor Y subunit B-4 OS=Arab... [more]
HAP3_KLULA2.257e-2855.26Transcriptional activator HAP3 OS=Kluyveromyces la... [more]
HAP3_SCHPO3.849e-2868.97Transcriptional activator hap3 OS=Schizosaccharomy... [more]
NFYB_XENLA5.953e-2174.60Nuclear transcription factor Y subunit beta (Fragm... [more]
NFYB1_ORYSJ4.881e-1543.68Nuclear transcription factor Y subunit B-1 OS=Oryz... [more]
DPOE3_RAT5.051e-1236.94DNA polymerase epsilon subunit 3 OS=Rattus norvegi... [more]
DPOE3_PONAB5.051e-1236.94DNA polymerase epsilon subunit 3 OS=Pongo abelii G... [more]
DPOE3_MOUSE5.051e-1235.14DNA polymerase epsilon subunit 3 OS=Mus musculus G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650105 ID=EY650105; Name=EY650105; organism=Citrus sinensis; type=EST; length=885bp
CTTGAGTTTTGTCTTCAAAGTTTTAATGGGTGATGATTTTACCTGAAATC
CAAAGGAATTTTTTTTTTTTTAAAAAAAAAAAATTGTGCTTCAAGCTAGC
TAGCCTTATAATTAACGTTTTCATGCATGCACTTAGAATTCAGTAAAAGC
TTCAAATTTTCTTCCGCAAAGCCTTCAATTTAAGCACCACCCTTCACCAG
AAGTACATAAAAAGCTTTTTAATTTAAGTTCATCTCCAAAATAATCATGG
GAGACTCGGATAATGATTCGGGAGGTGAAAGATAGAGGCAGCACGGCTCA
TCCAGGGAGCTGTCGCCGAGGGAGCAGGACAGGTTCCTGCCGATAGCAAA
CGTGAGCAGGATCATGAAAAAGGCCCTGCCCGCGAATGCCAAGATATCCA
AGGATGCCAAGGAGACCGTGCAAGAGTGCGTCTCCGAGTTCATTAGCTTC
GTCACCGGCGAGGCCTCCGATAAGTGCCAGAGGGAGAAGCGAAAGACCAT
CAATGGAGACGATCTCCTGTGGGCAATGACCACTCTGGGCTTCGAGGAAT
ACGTGGAGCCGCTCAAGGTTTACCTGCAGAGGTTCAGGGAGATGGAAGGG
GAGTAAATGGCGCGTGACAAGGACGCGCCGGCAGGTCACTGTGTTGGCGG
TGCGATTGGCGGATACTACGGCGGGATGATGATGATGGGACACNNGAGGT
AACTCAATCAGGGGACGTGATGGCTCTGGTGGGTTTATCATCAATGGCTT
AGTGCCCAAGGGTGGGCCCTACATTGGNTGTAGCTTAGTACGCCANATAG
GGGAAAGAGTCTGGAGGTGGATCTCTGAGACGGGAACCCGTACGGTGAAA
TNCGGGGGACATGGGATTGAACTCTGGGGCTACTN
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