EY650102

Overview
NameEY650102
Unique NameEY650102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYI_DESRM (Isoleucyl-tRNA synthetase OS=Desulfotomaculum reducens (strain MI-1) GN=ileS PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.039e-11
Identity = 32/123 (26.02%), Postives = 64/123 (52.03%), Query Frame = 2
Query:  209 PPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRLTKR 577
            PP   G +H+GH L   ++D I+++R MSGY+A +VPG D  G+     +E++ +++  + RH +   +F ++   +  ++  T   + +R+G   DW    +T+  +        F  + K+
Sbjct:   56 PPYANGHIHLGHTLNKVLKDIIVKYRSMSGYDAPYVPGWDTHGLP----IEQQAIKQLGINRHQVNPVEFRAKCKDYALKWANTQSEEFQRLGVRGDWENPYYTLLPQYEATQIRVFGEMAKK 174          

HSP 2 Score: 20.4014 bits (41), Expect = 8.039e-11
Identity = 9/22 (40.91%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  571 KEGLIYRDLRLVNWDWVLRTAI 636
            K+G IY+ L+ V W     TA+
Sbjct:  173 KKGYIYKGLKPVYWCASCETAL 194          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYL2_RHIL3 (Leucyl-tRNA synthetase 2 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=leuS2 PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 8.053e-11
Identity = 39/144 (27.08%), Postives = 60/144 (41.67%), Query Frame = 2
Query:   95 KEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMD 526
            + YNP   E  W   W     F  DN   +    ++   P  +G +H+GH    A+ D + R++R  GYN L   G D  G+  +    ++ +     T  +I                 G++  Q + +G SLDWSRE  T D
Sbjct:    4 ERYNPRDAEPRWQQKWNEDKVFETDNADPREKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRARGYNVLHPMGWDAFGMPAENAAMERGVHPASWTYQNI-----------------GSMKAQLKAMGLSLDWSREFATCD 130          

HSP 2 Score: 24.2534 bits (51), Expect = 8.053e-11
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  571 KEGLIYRDLRLVNWDWVLRTAI 636
            ++GL+YR    VNWD V  T +
Sbjct:  146 EKGLVYRKQSKVNWDPVDNTVL 167          
The following BLAST results are available for this feature:
BLAST of EY650102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 412
Match NameE-valueIdentityDescription
SYI_DESRM8.039e-1126.02Isoleucyl-tRNA synthetase OS=Desulfotomaculum redu... [more]
SYL2_RHIL38.053e-1127.08Leucyl-tRNA synthetase 2 OS=Rhizobium leguminosaru... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650102 ID=EY650102; Name=EY650102; organism=Citrus sinensis; type=EST; length=931bp
CCCACGCGTCCGTGACGGCGAATATGGGGGGGGGGGGTGTGTTGATCCAT
ATACGCCCTTGGGTGAGAAAAAGAGGATGTCTAAGCAAATGGCCAAGGAG
TATAATCCAAGCTCTGTTGAGAAGTCGTGGTATTCGTGGTGGGAGAACTC
TGGATATTTCATTGCAGATAACAAGATCTCGAAGCCATGCGGGGTGATTG
TTCTACCCCCACCAAATGTGACTGGTGCCCTACATATAGGACATGCCCTC
ACAACAGCCATACAGGATACAATTATACGTTGGAGGAGAATGTCTGGATA
TAATGCCTTGTGGGTACCTGGCATGGACCATGCTGGGATTGCAACACAGG
TGGTTGTAGAGAAGAAGCTAATGCGTGAAAGGAAATTAACTAGGCATGAC
ATTGGCCGTGAGCAATTTGTATCTGAGGTTTGGAAGTGGAAGGATGAGTA
TGGGGGTACCATATTAAGACAGCAACGTCGGGTAGGTGCTTCTCTTGACT
GGTCCCGTGAGTGCTTTACGATGGATGAAAAAAGGTCAAAGGCCGTGACA
GAGGCATTTGTTCGGCTTACAAAGAGGGTCTCATATATAGGGATCTTCGG
CTAGTAAACTGGGATTGGGTCTTACGGACAGCTATATGCTGTATTGGAAG
GGATAACGTTGACCTCCCATAAAGGGAGATGAGAAACCTTCCTGGGTATG
ATAAACAAGGGGAATTTGGGGGGTTAACATCATGTGGCGATCCCCTGGAA
GGAAGACTTGGGGGAATTGTGGGCGCCCTCCTAGGGGGGAACATTGTTGG
GGACACTCCCTTGGTTACTCCGGAGGAGCAGGGACCGGCTCGGGTGGAAG
TGGCGCTTCTACTTGATGGAGAAAAATCCTAATTGTGATGCATCCTGGGG
ACCCCAATTTGGACGGGGCCGTTAATAACAC
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