EY650102

Overview
NameEY650102
Unique NameEY650102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_SHEON (Valyl-tRNA synthetase OS=Shewanella oneidensis GN=valS PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.500e-50
Identity = 89/160 (55.62%), Postives = 114/160 (71.25%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M K Y+P S+E++ Y  WE  GYF      S+    I++PPPNVTG+LH+GHA    I DT+IR++RM G N LW  G DHAGIATQ++VE+KL  E   +RHD+GR+ F+ +VW+WK + GGTI +Q RR+GAS+DW RE FTMDE  SKAV E FVRL
Sbjct:    1 MEKTYDPQSIEQTLYQNWEEKGYFKPHGDASQGNYCIMIPPPNVTGSLHMGHAFQDTIMDTLIRYQRMKGKNTLWQVGTDHAGIATQMLVERKLEAEEGKSRHDLGRDVFMEKVWEWKAQSGGTITKQLRRMGASVDWDRERFTMDEGLSKAVQEVFVRL 160          

HSP 2 Score: 33.113 bits (74), Expect = 1.500e-50
Identity = 16/30 (53.33%), Postives = 20/30 (66.67%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDN 657
            Y++ LIYR  RLVNWD  L TAI  +  +N
Sbjct:  161 YEDDLIYRGKRLVNWDPKLHTAISDLEVEN 190          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_MANSM (Valyl-tRNA synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=valS PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.501e-50
Identity = 87/161 (54.04%), Postives = 110/161 (68.32%), Query Frame = 2
Query:   86 QMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            QMA  ++ S+VE++ Y+ WE  GYF       +P   I +PPPNVTG+LH+GHA    + DT+IR+ RM G N LW  G DHAGIATQ+VVE+K+  E   TRHD GRE F+ ++W WK   GGTI +Q RR+G S+DW RE FTMDE  S+AV E FVRL
Sbjct:    6 QMADRFDASAVEQALYNHWEQKGYFKPSYDAGRPSYSIAIPPPNVTGSLHMGHAFQQTLMDTLIRYHRMQGDNTLWQAGTDHAGIATQMVVERKIAAEENKTRHDYGREAFIEKIWDWKAYSGGTISQQMRRLGNSIDWERERFTMDEGLSEAVKEVFVRL 166          

HSP 2 Score: 35.039 bits (79), Expect = 1.501e-50
Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDN 657
            ++EGLIYR  RLVNWD  L TAI  +  +N
Sbjct:  167 HEEGLIYRGKRLVNWDPKLHTAISDLEVEN 196          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_PSEF5 (Valyl-tRNA synthetase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=valS PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.501e-50
Identity = 87/160 (54.37%), Postives = 115/160 (71.88%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M K Y P ++E SWY  WE+  YF      +     I++PPPNVTG+LH+GH    AI D +IR+RRM G N LW PG DHAGIATQ++VE+++  + +  RHD+GRE+F+ +VW+WKD+ GG I RQ RR+G+S+DWSRE FTMD+  S+AV EAFVRL
Sbjct:    1 MDKTYQPHAIETSWYQTWESENYFAPQG--AGDSYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERQIEAQGQ-NRHDLGREKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRL 157          

HSP 2 Score: 35.8094 bits (81), Expect = 1.501e-50
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDNVD 663
            +++GLIYR  RLVNWD  L TAI  +  +N D
Sbjct:  158 HEDGLIYRGKRLVNWDTKLHTAISDLEVENHD 189          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_COLP3 (Valyl-tRNA synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=valS PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.549e-50
Identity = 89/162 (54.94%), Postives = 114/162 (70.37%), Query Frame = 2
Query:   83 KQMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            K M K +NP+ +E+S Y+ WE  GYF    +       I +PPPNVTG+LH+GHA    I DT+IR++RM G N LW  G DHAGIATQ+VVE+K+  E   TRHD GRE F+ ++W+WK+E GGTI +Q RR+G S+DWSRE FTMD+  S+AV E FVRL
Sbjct:   16 KMMEKTFNPTDIEQSLYTSWEEQGYFSPTGEGDSYS--IAIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQTGCDHAGIATQMVVERKIAAEEDKTRHDYGREGFIDKIWEWKEESGGTIGKQMRRLGNSIDWSRERFTMDDGMSEAVQEVFVRL 175          

HSP 2 Score: 31.5722 bits (70), Expect = 2.549e-50
Identity = 15/32 (46.88%), Postives = 20/32 (62.50%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDNVD 663
            +++ LIYR  RLVNWD    TAI  +  +N D
Sbjct:  176 FEDDLIYRGKRLVNWDPKFHTAISDLEVENKD 207          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_PHOPR (Valyl-tRNA synthetase OS=Photobacterium profundum GN=valS PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 2.549e-50
Identity = 88/160 (55.00%), Postives = 110/160 (68.75%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M K YNP S+E++ Y  WE +GYF      SK    I++PPPNVTG+LH+GHA    I DT+IR  RM G N LW  G DHAGIATQ+VVE+K+  E   T+HD GR+ F+ ++W+WK E GGTI +Q RR+GAS+DW RE FTMD+  S A  E FVRL
Sbjct:    1 MEKTYNPQSIEQALYQRWEEAGYFKPHGDTSKDAYSIMIPPPNVTGSLHMGHAFQDTIMDTLIRAERMKGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTKHDYGRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGLSAATQEVFVRL 160          

HSP 2 Score: 32.3426 bits (72), Expect = 2.549e-50
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            ++E LIYR  RLVNWD  L TAI
Sbjct:  161 FEEDLIYRGKRLVNWDPKLHTAI 183          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_ACTPJ (Valyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=valS PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.549e-50
Identity = 88/161 (54.66%), Postives = 109/161 (67.70%), Query Frame = 2
Query:   86 QMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            QMA  ++ S+VE++ Y  WE  GYF      S P   I +PPPNVTG+LH+GHA    + DT+IR+ RM G N LW  G DHAGIATQ+VVE+K+  E   TRHD GRE F++++W WK   GGTI +Q RR+G S+DW RE FTMDE  S AV E FVRL
Sbjct:    6 QMADRFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVKEVFVRL 166          

HSP 2 Score: 35.039 bits (79), Expect = 2.549e-50
Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDN 657
            ++EGLIYR  RLVNWD  L TAI  +  +N
Sbjct:  167 HEEGLIYRGKRLVNWDPKLHTAISDLEVEN 196          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_ACTP7 (Valyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=valS PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.549e-50
Identity = 88/161 (54.66%), Postives = 109/161 (67.70%), Query Frame = 2
Query:   86 QMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            QMA  ++ S+VE++ Y  WE  GYF      S P   I +PPPNVTG+LH+GHA    + DT+IR+ RM G N LW  G DHAGIATQ+VVE+K+  E   TRHD GRE F++++W WK   GGTI +Q RR+G S+DW RE FTMDE  S AV E FVRL
Sbjct:    6 QMADRFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDREHFTMDEGLSNAVKEVFVRL 166          

HSP 2 Score: 35.039 bits (79), Expect = 2.549e-50
Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDN 657
            ++EGLIYR  RLVNWD  L TAI  +  +N
Sbjct:  167 HEEGLIYRGKRLVNWDPKLHTAISDLEVEN 196          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_ACTP2 (Valyl-tRNA synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=valS PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.549e-50
Identity = 88/161 (54.66%), Postives = 109/161 (67.70%), Query Frame = 2
Query:   86 QMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            QMA  ++ S+VE++ Y  WE  GYF      S P   I +PPPNVTG+LH+GHA    + DT+IR+ RM G N LW  G DHAGIATQ+VVE+K+  E   TRHD GRE F++++W WK   GGTI +Q RR+G S+DW RE FTMDE  S AV E FVRL
Sbjct:    6 QMADRFDSSAVEQALYKHWEEQGYFKPTENPSLPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVKEVFVRL 166          

HSP 2 Score: 35.039 bits (79), Expect = 2.549e-50
Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDN 657
            ++EGLIYR  RLVNWD  L TAI  +  +N
Sbjct:  167 HEEGLIYRGKRLVNWDPKLHTAISDLEVEN 196          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_METCA (Valyl-tRNA synthetase OS=Methylococcus capsulatus GN=valS PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.550e-50
Identity = 88/160 (55.00%), Postives = 112/160 (70.00%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M K Y P ++E+ WY  WE SG+F    + +  C  I++PPPNVTG+LH+GHA    + D +IR+ RM G   LW  G DHAGIATQ+VVE++L    + TRHD+GRE F+  VW+WK+  GGTI RQ RR+GASLDWSRE FT+DE  S+AV E FVRL
Sbjct:    1 MDKVYEPHAIEQRWYQHWEASGFFAPVGEGAPYC--IMIPPPNVTGSLHMGHAFQDTVMDVLIRYHRMKGDRTLWQAGTDHAGIATQMVVERQLAGVGQ-TRHDLGREAFIERVWQWKETSGGTITRQLRRMGASLDWSRERFTLDEGLSRAVREVFVRL 157          

HSP 2 Score: 38.5058 bits (88), Expect = 2.550e-50
Identity = 17/23 (73.91%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            Y+EGLIYR  RLVNWD VL TA+
Sbjct:  158 YEEGLIYRGKRLVNWDPVLHTAV 180          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_PELCD (Valyl-tRNA synthetase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=valS PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.551e-50
Identity = 90/164 (54.88%), Postives = 109/164 (66.46%), Query Frame = 2
Query:   77 MSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M  ++ K Y P  VE  WY +W  +G F AD    K    IV+PPPNVTG LH+GHAL   +QD + RW+RM G+  LW PG DHAGIATQ VVEK+L  E   +RHD+GRE FV  VW+W+ E GG I+ Q +R+GAS DW RE FTMDE  S+AV E FV L
Sbjct:   15 MEPKLPKGYEPHDVEAKWYEFWTENGLFHADENSPKNPFSIVIPPPNVTGVLHMGHALNNTLQDILARWKRMDGHEVLWQPGTDHAGIATQNVVEKQLAAEGS-SRHDLGREGFVDRVWQWRTESGGQIINQLKRLGASCDWERERFTMDEGLSRAVREVFVTL 177          

HSP 2 Score: 31.9574 bits (71), Expect = 2.551e-50
Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNW 612
            Y+EGLIYRD RL+NW
Sbjct:  178 YEEGLIYRDNRLINW 192          
The following BLAST results are available for this feature:
BLAST of EY650102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 412
Match NameE-valueIdentityDescription
SYV_SHEON1.500e-5055.63Valyl-tRNA synthetase OS=Shewanella oneidensis GN=... [more]
SYV_MANSM1.501e-5054.04Valyl-tRNA synthetase OS=Mannheimia succiniciprodu... [more]
SYV_PSEF51.501e-5054.38Valyl-tRNA synthetase OS=Pseudomonas fluorescens (... [more]
SYV_COLP32.549e-5054.94Valyl-tRNA synthetase OS=Colwellia psychrerythraea... [more]
SYV_PHOPR2.549e-5055.00Valyl-tRNA synthetase OS=Photobacterium profundum ... [more]
SYV_ACTPJ2.549e-5054.66Valyl-tRNA synthetase OS=Actinobacillus pleuropneu... [more]
SYV_ACTP72.549e-5054.66Valyl-tRNA synthetase OS=Actinobacillus pleuropneu... [more]
SYV_ACTP22.549e-5054.66Valyl-tRNA synthetase OS=Actinobacillus pleuropneu... [more]
SYV_METCA2.550e-5055.00Valyl-tRNA synthetase OS=Methylococcus capsulatus ... [more]
SYV_PELCD2.551e-5054.88Valyl-tRNA synthetase OS=Pelobacter carbinolicus (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650102 ID=EY650102; Name=EY650102; organism=Citrus sinensis; type=EST; length=931bp
CCCACGCGTCCGTGACGGCGAATATGGGGGGGGGGGGTGTGTTGATCCAT
ATACGCCCTTGGGTGAGAAAAAGAGGATGTCTAAGCAAATGGCCAAGGAG
TATAATCCAAGCTCTGTTGAGAAGTCGTGGTATTCGTGGTGGGAGAACTC
TGGATATTTCATTGCAGATAACAAGATCTCGAAGCCATGCGGGGTGATTG
TTCTACCCCCACCAAATGTGACTGGTGCCCTACATATAGGACATGCCCTC
ACAACAGCCATACAGGATACAATTATACGTTGGAGGAGAATGTCTGGATA
TAATGCCTTGTGGGTACCTGGCATGGACCATGCTGGGATTGCAACACAGG
TGGTTGTAGAGAAGAAGCTAATGCGTGAAAGGAAATTAACTAGGCATGAC
ATTGGCCGTGAGCAATTTGTATCTGAGGTTTGGAAGTGGAAGGATGAGTA
TGGGGGTACCATATTAAGACAGCAACGTCGGGTAGGTGCTTCTCTTGACT
GGTCCCGTGAGTGCTTTACGATGGATGAAAAAAGGTCAAAGGCCGTGACA
GAGGCATTTGTTCGGCTTACAAAGAGGGTCTCATATATAGGGATCTTCGG
CTAGTAAACTGGGATTGGGTCTTACGGACAGCTATATGCTGTATTGGAAG
GGATAACGTTGACCTCCCATAAAGGGAGATGAGAAACCTTCCTGGGTATG
ATAAACAAGGGGAATTTGGGGGGTTAACATCATGTGGCGATCCCCTGGAA
GGAAGACTTGGGGGAATTGTGGGCGCCCTCCTAGGGGGGAACATTGTTGG
GGACACTCCCTTGGTTACTCCGGAGGAGCAGGGACCGGCTCGGGTGGAAG
TGGCGCTTCTACTTGATGGAGAAAAATCCTAATTGTGATGCATCCTGGGG
ACCCCAATTTGGACGGGGCCGTTAATAACAC
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