EY650102

Overview
NameEY650102
Unique NameEY650102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_PSEPK (Valyl-tRNA synthetase OS=Pseudomonas putida (strain KT2440) GN=valS PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.323e-50
Identity = 87/160 (54.37%), Postives = 116/160 (72.50%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M K Y P ++E SWY+ WE+  YF      +     I++PPPNVTG+LH+GH    AI D +IR+RRM G + LW PG DHAGIATQ++VE++L  + +  RHD+GRE+F+ +VW+WKD+ GG I RQ RR+G+S+DWSRE FTMD+  S+AV EAFVRL
Sbjct:    1 MDKTYQPHAIETSWYNTWESENYFAPQG--AGESYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRDTLWQPGTDHAGIATQMLVERQLEAKGQ-NRHDLGREKFLEKVWEWKDQSGGNISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRL 157          

HSP 2 Score: 35.8094 bits (81), Expect = 3.323e-50
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDNVD 663
            +++GLIYR  RLVNWD  L TAI  +  +N D
Sbjct:  158 HEDGLIYRGKRLVNWDTKLHTAISDLEVENHD 189          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_NITMU (Valyl-tRNA synthetase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=valS PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.332e-50
Identity = 87/165 (52.73%), Postives = 111/165 (67.27%), Query Frame = 2
Query:   86 QMAKEYNPSSVEKSWYSWWENSGYF----IADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            ++ K ++P ++E  WYS WE  GYF            P   I+LPPPNVTG LH+GHA    + D + R+ RM G N LW PG DHAGIATQ+VVE++L  ++ + R D+GRE F++ VW+WK+E G TI RQ RR+GAS DWSRE FTMD   S+AVTE FVRL
Sbjct:    2 ELEKSFDPRAIESRWYSRWEGEGYFRPGPAGTAGDQAPAYCIMLPPPNVTGTLHMGHAFQHTLMDALTRYHRMRGDNTLWQPGTDHAGIATQIVVERQL-DQQSIDRRDLGREAFLARVWEWKEESGSTISRQMRRMGASCDWSRERFTMDGGLSRAVTEVFVRL 165          

HSP 2 Score: 38.891 bits (89), Expect = 4.332e-50
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            Y+EGLIYR  RLVNWD VL+TA+
Sbjct:  166 YREGLIYRGERLVNWDPVLQTAV 188          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_BURPS (Valyl-tRNA synthetase OS=Burkholderia pseudomallei GN=valS PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 5.645e-50
Identity = 87/160 (54.37%), Postives = 111/160 (69.38%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            +AK + P ++E  W   WE  GY       S+P   I LPPPNVTG LH+GHA    I D ++R+ RM G+N LWVPG DHAGIATQ+VVE++L   + ++RHD+GRE+FV  VW+WK+  G TI  Q RR+GAS DWSRE FTM++K S+AV E FVRL
Sbjct:    6 LAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVVERQL-DAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYFTMNDKMSEAVREVFVRL 164          

HSP 2 Score: 36.5798 bits (83), Expect = 5.645e-50
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            Y++GLIYR  RLVNWD VL TA+
Sbjct:  165 YEQGLIYRGKRLVNWDPVLLTAV 187          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_BURMA (Valyl-tRNA synthetase OS=Burkholderia mallei GN=valS PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 5.645e-50
Identity = 87/160 (54.37%), Postives = 111/160 (69.38%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            +AK + P ++E  W   WE  GY       S+P   I LPPPNVTG LH+GHA    I D ++R+ RM G+N LWVPG DHAGIATQ+VVE++L   + ++RHD+GRE+FV  VW+WK+  G TI  Q RR+GAS DWSRE FTM++K S+AV E FVRL
Sbjct:    6 LAKSFEPQTIESQWGPEWEKRGYATPALDPSRPDFSIQLPPPNVTGTLHMGHAFNQTIMDGLVRYHRMLGHNTLWVPGTDHAGIATQIVVERQL-DAQGVSRHDLGREKFVERVWEWKERSGSTITGQVRRIGASPDWSREYFTMNDKMSEAVREVFVRL 164          

HSP 2 Score: 36.5798 bits (83), Expect = 5.645e-50
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            Y++GLIYR  RLVNWD VL TA+
Sbjct:  165 YEQGLIYRGKRLVNWDPVLLTAV 187          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_PSEU2 (Valyl-tRNA synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=valS PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.646e-50
Identity = 89/165 (53.94%), Postives = 117/165 (70.91%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGV-----IVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M K Y P ++E SWY  WE+  YF        P GV     I++PPPNVTG+LH+GH    AI D +IR+RRM G N LW PG DHAGIATQ++VE++L   + ++RH++GRE+F+ ++W+WK E GG I RQ RR+G+S+DWSRE FTMD+  S+AV EAFVRL
Sbjct:    1 MDKTYQPHAIETSWYQTWESENYFA-------PQGVGDSYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRL-EAQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRL 157          

HSP 2 Score: 35.8094 bits (81), Expect = 5.646e-50
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDNVD 663
            +++GLIYR  RLVNWD  L TAI  +  +N D
Sbjct:  158 HEDGLIYRGKRLVNWDTKLHTAISDLEVENHD 189          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_PSE14 (Valyl-tRNA synthetase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=valS PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.359e-50
Identity = 89/165 (53.94%), Postives = 116/165 (70.30%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGV-----IVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M K Y P ++E SWY  WE+  YF        P GV     I++PPPNVTG+LH+GH    AI D +IR+RRM G N LW PG DHAGIATQ++VE++L   + ++RH++GRE+F+ ++W+WK E GG I RQ RR+G+S+DWSRE FTMD+  S AV EAFVRL
Sbjct:    1 MDKTYQPHAIETSWYQTWESENYFA-------PQGVGDSYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRL-EAQGISRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERFTMDDGLSDAVKEAFVRL 157          

HSP 2 Score: 35.8094 bits (81), Expect = 7.359e-50
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDNVD 663
            +++GLIYR  RLVNWD  L TAI  +  +N D
Sbjct:  158 HEDGLIYRGKRLVNWDTKLHTAISDLEVENHD 189          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_PSESM (Valyl-tRNA synthetase OS=Pseudomonas syringae pv. tomato GN=valS PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 9.591e-50
Identity = 86/160 (53.75%), Postives = 114/160 (71.25%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M K Y P ++E SWY  WE+  YF      +     I++PPPNVTG+LH+GH    AI D +IR+RRM G N LW PG DHAGIATQ++VE++L   + ++RH++GRE+F+ ++W+WK E GG I RQ RR+G+S+DWSRE FTMD+  S AV EAFVRL
Sbjct:    1 MDKTYQPHAIETSWYQTWESENYFAPQG--AGDSYTIMIPPPNVTGSLHMGHGFNNAIMDALIRFRRMQGRNTLWQPGTDHAGIATQMLVERRL-EAQGVSRHELGREKFLDKIWEWKAESGGNISRQIRRLGSSVDWSRERFTMDDGLSDAVKEAFVRL 157          

HSP 2 Score: 35.8094 bits (81), Expect = 9.591e-50
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDNVD 663
            +++GLIYR  RLVNWD  L TAI  +  +N D
Sbjct:  158 HEDGLIYRGKRLVNWDTKLHTAISDLEVENHD 189          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_GRABC (Valyl-tRNA synthetase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=valS PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.630e-49
Identity = 84/163 (51.53%), Postives = 113/163 (69.33%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRLTKR 577
            ++K ++ ++ E+  Y+ WE+ G F A+   S     I++PPPNVTG+LH+GHALT  +QD+++RWRRM G + LW PG DHAGIATQ+VVE+ L  E    R +IGR+ F+  VW+WK E GG I  Q RR+GASLDW RE FTMDE  S AV + FV L ++
Sbjct:    7 LSKNFDHAANEQRIYAGWEHGGAFAANPASSATPFTIMIPPPNVTGSLHMGHALTFTLQDSLVRWRRMQGRDVLWQPGTDHAGIATQMVVERLLASEGSPGRREIGRDAFLDRVWRWKAESGGNITHQLRRLGASLDWGRERFTMDEGLSAAVRDVFVTLYRQ 169          

HSP 2 Score: 41.2022 bits (95), Expect = 1.630e-49
Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDNVDLP*REMRNLPGYDKQGEFGGLTSCGDPLEGRLGGIVGALL-GGNIVGDTPL-VTPEEQ 831
            Y++GLIYRD RLVNWD  L+TAI      ++++  RE+R           G L     PLE   G I+ A      ++GD+ + V PE++
Sbjct:  167 YRQGLIYRDRRLVNWDPQLQTAI-----SDLEVESREVR-----------GNLWHIRYPLEDGEGSIIVATTRPETMLGDSAVAVHPEDE 240          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_FRATT (Valyl-tRNA synthetase OS=Francisella tularensis subsp. tularensis GN=valS PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 2.124e-49
Identity = 87/164 (53.05%), Postives = 116/164 (70.73%), Query Frame = 2
Query:   77 MSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            M++++ K YNP  +E++ Y  WE SG F   N  SK    I+LPPPNVTG LH+GH    ++ D +IR+ RMSG + LW PG DHAGIATQ+VVE++L   + ++RHD+GRE FVS+VW+WK+  GGTI  Q RR+GAS DW RE FTMD+  S AV + F++L
Sbjct:    1 MTQEINKNYNPKEIEQANYQNWEASGKFACGNTDSKDTYTIMLPPPNVTGTLHMGHGFQMSLMDILIRYNRMSGKDTLWQPGTDHAGIATQMVVERQL-NAQGISRHDLGRENFVSKVWEWKELSGGTITSQMRRIGASPDWDRERFTMDKGLSDAVKKCFIKL 163          

HSP 2 Score: 33.8834 bits (76), Expect = 2.124e-49
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDNVD 663
            Y++GL YR  RLVNWD  L+TA+  +    VD
Sbjct:  164 YEDGLAYRGERLVNWDPKLKTAVSDLEVAQVD 195          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_RALSO (Valyl-tRNA synthetase OS=Ralstonia solanacearum GN=valS PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.768e-49
Identity = 85/163 (52.15%), Postives = 114/163 (69.94%), Query Frame = 2
Query:   80 SKQMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            ++ +AK + P+++E+ W + WE  G   A  +  +P   I LPPPNVTG LH+GHA    I D + R  RM G N LWVPG DHAGIATQ+VVE++L   + ++RHD+GR  FV +VW+WK++ G TI RQ RR+GAS+DW RE FTMD K S+AV++ FVRL
Sbjct:    5 NQSLAKSFEPAAIEQKWSAAWEAMGISRATLEAGRPDFCIQLPPPNVTGTLHMGHAFNQTIMDGLARHARMQGANTLWVPGTDHAGIATQIVVERQL-DAQGISRHDLGRPAFVDKVWEWKEQSGSTITRQIRRMGASIDWEREYFTMDPKMSRAVSDVFVRL 166          

HSP 2 Score: 36.5798 bits (83), Expect = 2.768e-49
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            Y++GLIYR  RLVNWD VL TA+
Sbjct:  167 YEQGLIYRGKRLVNWDPVLGTAV 189          
The following BLAST results are available for this feature:
BLAST of EY650102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 412
Match NameE-valueIdentityDescription
SYV_PSEPK3.323e-5054.38Valyl-tRNA synthetase OS=Pseudomonas putida (strai... [more]
SYV_NITMU4.332e-5052.73Valyl-tRNA synthetase OS=Nitrosospira multiformis ... [more]
SYV_BURPS5.645e-5054.38Valyl-tRNA synthetase OS=Burkholderia pseudomallei... [more]
SYV_BURMA5.645e-5054.38Valyl-tRNA synthetase OS=Burkholderia mallei GN=va... [more]
SYV_PSEU25.646e-5053.94Valyl-tRNA synthetase OS=Pseudomonas syringae pv. ... [more]
SYV_PSE147.359e-5053.94Valyl-tRNA synthetase OS=Pseudomonas syringae pv. ... [more]
SYV_PSESM9.591e-5053.75Valyl-tRNA synthetase OS=Pseudomonas syringae pv. ... [more]
SYV_GRABC1.630e-4951.53Valyl-tRNA synthetase OS=Granulibacter bethesdensi... [more]
SYV_FRATT2.124e-4953.05Valyl-tRNA synthetase OS=Francisella tularensis su... [more]
SYV_RALSO2.768e-4952.15Valyl-tRNA synthetase OS=Ralstonia solanacearum GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650102 ID=EY650102; Name=EY650102; organism=Citrus sinensis; type=EST; length=931bp
CCCACGCGTCCGTGACGGCGAATATGGGGGGGGGGGGTGTGTTGATCCAT
ATACGCCCTTGGGTGAGAAAAAGAGGATGTCTAAGCAAATGGCCAAGGAG
TATAATCCAAGCTCTGTTGAGAAGTCGTGGTATTCGTGGTGGGAGAACTC
TGGATATTTCATTGCAGATAACAAGATCTCGAAGCCATGCGGGGTGATTG
TTCTACCCCCACCAAATGTGACTGGTGCCCTACATATAGGACATGCCCTC
ACAACAGCCATACAGGATACAATTATACGTTGGAGGAGAATGTCTGGATA
TAATGCCTTGTGGGTACCTGGCATGGACCATGCTGGGATTGCAACACAGG
TGGTTGTAGAGAAGAAGCTAATGCGTGAAAGGAAATTAACTAGGCATGAC
ATTGGCCGTGAGCAATTTGTATCTGAGGTTTGGAAGTGGAAGGATGAGTA
TGGGGGTACCATATTAAGACAGCAACGTCGGGTAGGTGCTTCTCTTGACT
GGTCCCGTGAGTGCTTTACGATGGATGAAAAAAGGTCAAAGGCCGTGACA
GAGGCATTTGTTCGGCTTACAAAGAGGGTCTCATATATAGGGATCTTCGG
CTAGTAAACTGGGATTGGGTCTTACGGACAGCTATATGCTGTATTGGAAG
GGATAACGTTGACCTCCCATAAAGGGAGATGAGAAACCTTCCTGGGTATG
ATAAACAAGGGGAATTTGGGGGGTTAACATCATGTGGCGATCCCCTGGAA
GGAAGACTTGGGGGAATTGTGGGCGCCCTCCTAGGGGGGAACATTGTTGG
GGACACTCCCTTGGTTACTCCGGAGGAGCAGGGACCGGCTCGGGTGGAAG
TGGCGCTTCTACTTGATGGAGAAAAATCCTAATTGTGATGCATCCTGGGG
ACCCCAATTTGGACGGGGCCGTTAATAACAC
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