EY650102

Overview
NameEY650102
Unique NameEY650102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_YEAST (Valyl-tRNA synthetase, mitochondrial OS=Saccharomyces cerevisiae GN=VAS1 PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 5.547e-49
Identity = 101/185 (54.59%), Postives = 127/185 (68.65%), Query Frame = 2
Query:   41 VDPYTPLGEKK---RMSKQMAKEYNPSSVEKSWYSWWENSGYF----IADNKISKPCGVIVLP--PPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            +D   P GEKK    +     K YNP++VE SWY WW  +G F     AD K+ KP GV  +P  PPNVTGALHIGHALT AIQD++IR+ RM G   L++PG DHAGIATQ VVEK++  + + TRHD GRE FV +VW+WK+EY   I  Q +++GAS DWSRE FT+  + +K+V EAFVRL
Sbjct:  126 IDKTVP-GEKKILVSLDDPALKAYNPANVESSWYDWWIKTGVFEPEFTADGKV-KPEGVFCIPAPPPNVTGALHIGHALTIAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQIWAKDRKTRHDYGREAFVGKVWEWKEEYHSRIKNQIQKLGASYDWSREAFTLSPELTKSVEEAFVRL 308          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_AZOSB (Valyl-tRNA synthetase OS=Azoarcus sp. (strain BH72) GN=valS PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.126e-49
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 2
Query:   86 QMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGV-IVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            ++AK + P+++E   Y  WE+ GYF A    S P    I+LPPPNVTG LH+GH     I D + R+ RM G N LW PG DHAGIATQ+VVE++L  +  ++RHD+GRE+F+ +VW+WK+  GGTI RQ RR+G S DW RE FTMDE  SK VTE FVRL
Sbjct:    2 ELAKSFEPAAIEARRYPEWESRGYFDAGLDTSNPNAFCILLPPPNVTGTLHMGHGFNQTIMDALTRYHRMRGDNTLWQPGTDHAGIATQIVVERQLDAQG-VSRHDLGREKFLEKVWEWKEYSGGTITRQMRRLGTSPDWKRERFTMDEGLSKTVTETFVRL 162          

HSP 2 Score: 35.039 bits (79), Expect = 6.126e-49
Identity = 16/23 (69.57%), Postives = 17/23 (73.91%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            Y EGLIYR  RLVNWD  L TA+
Sbjct:  163 YNEGLIYRGKRLVNWDPKLGTAV 185          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_RALEJ (Valyl-tRNA synthetase OS=Ralstonia eutropha (strain JMP134) GN=valS PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.129e-49
Identity = 87/162 (53.70%), Postives = 109/162 (67.28%), Query Frame = 2
Query:   83 KQMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            + +AK + P+++E  W   WE  G        +KP   I LPPPNVTG LH+GHA    I D + R  RM G N LWVPG DHAGIATQ+VVE++L   + ++RHD+GRE+F  +VW WK+E G TI RQ RR+GAS+DW+RE FTM    SKAVTE FVRL
Sbjct:    6 QSLAKSFEPAAIEAKWGPEWEKRGIAQPTFDPAKPDFAIQLPPPNVTGTLHMGHAFNQTIMDGLTRHARMLGANTLWVPGTDHAGIATQIVVERQL-EAQGVSRHDLGREKFTEKVWAWKEESGSTITRQVRRMGASIDWTREYFTMSPDMSKAVTEVFVRL 166          

HSP 2 Score: 36.965 bits (84), Expect = 6.129e-49
Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAICCIGRDNVD 663
            +++GLIYR  RLVNWD VL TA+  +  D+V+
Sbjct:  167 HEQGLIYRGKRLVNWDPVLGTAVSDLEVDSVE 198          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_BARHE (Valyl-tRNA synthetase OS=Bartonella henselae GN=valS PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.306e-48
Identity = 85/165 (51.52%), Postives = 115/165 (69.70%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIAD--NKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRLTKR 577
            + K Y+ +S+E+     WE  G F A   +K +     ++LPPPNVTG+LH+GHAL T IQD ++R++RM G N LW PGMDHAGIATQ+VVE++L   ++ TR ++GRE+FV  +W+W+ E GG I  Q RR+G S DWSRE FTMD+  S+AV E FV L K+
Sbjct:    2 LEKNYDAASIEQRIAKKWEARGAFKAGMGSKSAAQSFCVMLPPPNVTGSLHMGHALNTTIQDIVVRFQRMRGKNVLWQPGMDHAGIATQMVVERQLAERQEPTRQEMGREKFVERIWEWRYETGGVIANQLRRLGVSCDWSRERFTMDDGLSEAVREVFVTLYKQ 166          

HSP 2 Score: 38.891 bits (89), Expect = 2.306e-48
Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            YK+GLIYRD RLVNWD  L TAI
Sbjct:  164 YKQGLIYRDKRLVNWDPKLLTAI 186          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_SPHWW (Valyl-tRNA synthetase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=valS PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.918e-48
Identity = 86/158 (54.43%), Postives = 116/158 (73.42%), Query Frame = 2
Query:   95 KEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            K ++P+++E  WY+ WE++G F  +   ++P   IV+PPPNVTG+LHIGHAL   +QD +IR  R+ G +ALWV G DHAGIATQ+VVE++L  + +  R D  REQF+++VW+WK+E GGTI RQ RR+GAS DW+ E FTMDE  SKAV + FV L
Sbjct:    5 KTFDPAAIEARWYAHWEDNGLFRPERPEAEPY-TIVIPPPNVTGSLHIGHALDDTLQDVLIRHARLKGKDALWVVGTDHAGIATQMVVERQLDAKGQ-KRTDFTREQFIAKVWEWKEESGGTITRQLRRLGASCDWANERFTMDEGFSKAVLKVFVDL 160          

HSP 2 Score: 37.3502 bits (85), Expect = 3.918e-48
Identity = 16/23 (69.57%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            Y +GL+YRD RLVNWD  L+TAI
Sbjct:  161 YNQGLLYRDKRLVNWDPGLKTAI 183          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_DECAR (Valyl-tRNA synthetase OS=Dechloromonas aromatica (strain RCB) GN=valS PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.104e-48
Identity = 84/162 (51.85%), Postives = 110/162 (67.90%), Query Frame = 2
Query:   86 QMAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGV-IVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            ++AK + P+ +E+ WY  WE   YF A    SK     I+LPPPNVTG LH+GH     I D + R+ RM G+N LW PG DHAGIATQ+VVE++L   + ++RHD+GRE+F+ +VW+WK+  G TI +Q RR+G S DW RE FTMD   +K VTE FVRL
Sbjct:    2 ELAKAFEPADIERRWYPEWETQNYFAAGVDASKADNFCILLPPPNVTGTLHMGHGFNQTIMDALTRYYRMRGHNTLWQPGTDHAGIATQIVVERQL-DAQGISRHDLGREKFLEKVWEWKEYSGNTITKQMRRMGTSPDWKRERFTMDAGLNKVVTETFVRL 162          

HSP 2 Score: 34.2686 bits (77), Expect = 5.104e-48
Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            + EGLIYR  RLVNWD  L TA+
Sbjct:  163 FNEGLIYRGKRLVNWDPKLNTAV 185          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_CAUCR (Valyl-tRNA synthetase OS=Caulobacter crescentus GN=valS PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.655e-48
Identity = 88/163 (53.99%), Postives = 111/163 (68.10%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRLTKR 577
            + K ++P SVE   Y+ WE SG F      +    VIV+PPPNVTG+LHIGHAL   +QD + R+ RM G  ALW+PG DHAGIATQ+VVE++L     + R D+GRE FV +VW+WK E GG I  Q RR+GAS DWSRE FT+DE  S AV + FV+L K+
Sbjct:    2 LEKTFDPQSVEPRLYAAWEASGAFKPAEDPNAEPFVIVIPPPNVTGSLHIGHALNNTLQDVLTRFHRMRGKAALWLPGTDHAGIATQMVVERQLAAAGNIGRRDMGREAFVDKVWEWKAESGGAITNQLRRLGASCDWSRERFTLDEGLSAAVRKVFVQLYKQ 164          

HSP 2 Score: 35.4242 bits (80), Expect = 6.655e-48
Identity = 15/23 (65.22%), Postives = 18/23 (78.26%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            YK+ L+YRD RLVNWD   +TAI
Sbjct:  162 YKQNLLYRDKRLVNWDPQFQTAI 184          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_ANOFW (Valyl-tRNA synthetase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=valS PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 6.657e-48
Identity = 87/160 (54.37%), Postives = 111/160 (69.38%), Query Frame = 2
Query:   98 EYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRLTKR 577
            +Y+  +VE + Y WW    +F A +  +K    IV+PPPNVTG LH+GHA  T +QD I R +RM GY+ LW+PGMDHAGIATQ  VE+KL  E K TR+D+GRE+FV E WKWK+EY G I  Q  ++G  LD++RE FT+DE  SKAV E FV L K+
Sbjct:    6 KYDHRAVEANRYEWWLKGKFFEATSDETKKPFTIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLRNEGK-TRYDLGREKFVEETWKWKEEYAGHIRSQWAKLGLGLDYTRERFTLDEGLSKAVREVFVSLYKK 164          

HSP 2 Score: 33.8834 bits (76), Expect = 6.657e-48
Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 1
Query:  562 SAYKEGLIYRDLRLVNWDWVLRTAI 636
            S YK+GLIYR   ++NWD V +TA+
Sbjct:  160 SLYKKGLIYRGEYIINWDPVTKTAL 184          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_RHILO (Valyl-tRNA synthetase OS=Rhizobium loti GN=valS PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 8.671e-48
Identity = 88/164 (53.66%), Postives = 112/164 (68.29%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGV--IVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRLTK 574
            + K Y+  +VE      WE +  F A     +      IV+PPPNVTG+LH+GHAL   +QD ++R+ RM G N LW PGMDHAGIATQ+VVE++LM E+++ R D+ REQF+ +VW+WK E GGTI  Q +R+GAS DWSRE FTMDE  SKAV E FV L K
Sbjct:    2 LEKTYDAKTVEPKIAKVWEEADAFRAGAGAEEGAEAFTIVIPPPNVTGSLHMGHALNNTLQDILVRFERMRGKNVLWQPGMDHAGIATQMVVERQLM-EKQIHRRDLTREQFIEKVWEWKAESGGTIFNQLKRLGASADWSRERFTMDEGLSKAVLEVFVTLYK 164          

HSP 2 Score: 38.5058 bits (88), Expect = 8.671e-48
Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            YKEGLIY+D RLVNWD  L TAI
Sbjct:  163 YKEGLIYKDKRLVNWDPRLLTAI 185          
BLAST of EY650102 vs. ExPASy Swiss-Prot
Match: SYV_NOCFA (Valyl-tRNA synthetase OS=Nocardia farcinica GN=valS PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.674e-48
Identity = 89/160 (55.62%), Postives = 108/160 (67.50%), Query Frame = 2
Query:   89 MAKEYNPSSVEKSWYSWWENSGYFIADNKISKPCGVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRVGASLDWSRECFTMDEKRSKAVTEAFVRL 568
            + K ++PS+VE   Y  W ++GYF AD    KP   IVLPPPNVTG LH+GHAL   + DT+ R +RM GY  LW+PGMDHAGIATQ VVEK+L  + K T+ D GRE FV +VW WK E GG I  Q R +G  +DWSR+ FTMDE  S+AV   F RL
Sbjct:   16 LPKSWDPSAVEAEMYERWVSAGYFTADPASGKPAYSIVLPPPNVTGTLHMGHALDHTLMDTLARRKRMQGYEVLWLPGMDHAGIATQTVVEKQLAVDGK-TKEDFGRELFVEKVWDWKRESGGAIQWQMRALGDGVDWSRDRFTMDEGLSRAVQTMFKRL 174          

HSP 2 Score: 32.3426 bits (72), Expect = 8.674e-48
Identity = 16/23 (69.57%), Postives = 16/23 (69.57%), Query Frame = 1
Query:  568 YKEGLIYRDLRLVNWDWVLRTAI 636
            Y  GLIYR  RLVNW   LRTAI
Sbjct:  175 YDAGLIYRAERLVNWSPELRTAI 197          
The following BLAST results are available for this feature:
BLAST of EY650102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 412
Match NameE-valueIdentityDescription
SYV_YEAST5.547e-4954.59Valyl-tRNA synthetase, mitochondrial OS=Saccharomy... [more]
SYV_AZOSB6.126e-4954.32Valyl-tRNA synthetase OS=Azoarcus sp. (strain BH72... [more]
SYV_RALEJ6.129e-4953.70Valyl-tRNA synthetase OS=Ralstonia eutropha (strai... [more]
SYV_BARHE2.306e-4851.52Valyl-tRNA synthetase OS=Bartonella henselae GN=va... [more]
SYV_SPHWW3.918e-4854.43Valyl-tRNA synthetase OS=Sphingomonas wittichii (s... [more]
SYV_DECAR5.104e-4851.85Valyl-tRNA synthetase OS=Dechloromonas aromatica (... [more]
SYV_CAUCR6.655e-4853.99Valyl-tRNA synthetase OS=Caulobacter crescentus GN... [more]
SYV_ANOFW6.657e-4854.38Valyl-tRNA synthetase OS=Anoxybacillus flavithermu... [more]
SYV_RHILO8.671e-4853.66Valyl-tRNA synthetase OS=Rhizobium loti GN=valS PE... [more]
SYV_NOCFA8.674e-4855.63Valyl-tRNA synthetase OS=Nocardia farcinica GN=val... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-007-C03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650102 ID=EY650102; Name=EY650102; organism=Citrus sinensis; type=EST; length=931bp
CCCACGCGTCCGTGACGGCGAATATGGGGGGGGGGGGTGTGTTGATCCAT
ATACGCCCTTGGGTGAGAAAAAGAGGATGTCTAAGCAAATGGCCAAGGAG
TATAATCCAAGCTCTGTTGAGAAGTCGTGGTATTCGTGGTGGGAGAACTC
TGGATATTTCATTGCAGATAACAAGATCTCGAAGCCATGCGGGGTGATTG
TTCTACCCCCACCAAATGTGACTGGTGCCCTACATATAGGACATGCCCTC
ACAACAGCCATACAGGATACAATTATACGTTGGAGGAGAATGTCTGGATA
TAATGCCTTGTGGGTACCTGGCATGGACCATGCTGGGATTGCAACACAGG
TGGTTGTAGAGAAGAAGCTAATGCGTGAAAGGAAATTAACTAGGCATGAC
ATTGGCCGTGAGCAATTTGTATCTGAGGTTTGGAAGTGGAAGGATGAGTA
TGGGGGTACCATATTAAGACAGCAACGTCGGGTAGGTGCTTCTCTTGACT
GGTCCCGTGAGTGCTTTACGATGGATGAAAAAAGGTCAAAGGCCGTGACA
GAGGCATTTGTTCGGCTTACAAAGAGGGTCTCATATATAGGGATCTTCGG
CTAGTAAACTGGGATTGGGTCTTACGGACAGCTATATGCTGTATTGGAAG
GGATAACGTTGACCTCCCATAAAGGGAGATGAGAAACCTTCCTGGGTATG
ATAAACAAGGGGAATTTGGGGGGTTAACATCATGTGGCGATCCCCTGGAA
GGAAGACTTGGGGGAATTGTGGGCGCCCTCCTAGGGGGGAACATTGTTGG
GGACACTCCCTTGGTTACTCCGGAGGAGCAGGGACCGGCTCGGGTGGAAG
TGGCGCTTCTACTTGATGGAGAAAAATCCTAATTGTGATGCATCCTGGGG
ACCCCAATTTGGACGGGGCCGTTAATAACAC
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