EY650097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS_AEGTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.379e-57 Identity = 101/162 (62.35%), Postives = 127/162 (78.40%), Query Frame = 3 Query: 90 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 + A+ VAPF GLKS++ P ++++N SNGGR++CM+VWP G+KKFETLSYLPPLS E LLK+++YLIRS W+PCLEF + G+++REH+ SPGYYDGRYWTMWKLPM+GC T V+ E EV KEYP + RIIGFDN RQVQ +SFIA+KPPG Sbjct: 8 SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFR-KVGFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKEYPDPYCRIIGFDNMRQVQSVSFIASKPPG 168
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS_MAIZE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 9.884e-56 Identity = 99/162 (61.11%), Postives = 128/162 (79.01%), Query Frame = 3 Query: 90 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 + A+ VAPF GLKS+++ P ++++ + ++ SNGGR++CM+VWP G KKFETLSYLPPLS + LLK+++YL+R+GWIPCLEF + G+VYRE+ SP YYDGRYWTMWKLPM+GC DAT V KE E K YP +F R+IGFDN +Q QC+SFIA KPPG Sbjct: 9 SSATAVAPFQGLKSTASLPVARRSSRSLGNV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFS-KVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRVIGFDNIKQTQCVSFIAYKPPG 168
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS_PINTH (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.208e-53 Identity = 98/170 (57.65%), Postives = 128/170 (75.29%), Query Frame = 3 Query: 72 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITS----IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKP 569 A A A++V+ FTGLKS++ FP++ K +N SNGGRV+CM+VWPP G KFETLSYLP L++E L+KE+ YL+R+ W+PCLEF+LE G + R++++SPGYYDGRYW MWKLPM+GCT+A+ V+ E E K YP +F+R+IGFDN RQVQCISFI KP Sbjct: 2 ATGAGAGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLE-GSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 3.887e-52 Identity = 93/132 (70.45%), Postives = 107/132 (81.06%), Query Frame = 3 Query: 174 TSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKP 569 T I SNG RV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFEL KG+VY EH+KSP YYDGRYWTMWKLPM+G TD V+KE EV YP +FVR+IGF+N RQVQCISFIA P Sbjct: 2 TDITSNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVYGEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTP 133
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS_LARLA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.131e-51 Identity = 97/177 (54.80%), Postives = 126/177 (71.19%), Query Frame = 3 Query: 51 SSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITS----IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKP 569 ++A A A + +++V+ FTGLKS + FP++K +N SNG RV+CM+VWPP KKFETLSYLP L+ E L+KE+ YL+++ W+PCLEFE E G + R + SPGYYDGRYW MWKLPM+GCT+A+ VL E E K YP++F+R+IGFDN RQVQCISFI KP Sbjct: 11 TAAVAAVAAPSKTGNSNVVSAFTGLKSMAQFPSSKTMSNAGAEWEQKTTSNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFE-EDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS_SACHY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.358e-49 Identity = 92/162 (56.79%), Postives = 119/162 (73.46%), Query Frame = 3 Query: 90 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 + A+ APF GLKS+++ P +++ + + SNGGR++CM+VWP G KKFETLSYLPPL+ E LLK+++YL+R+ W+PCLEF E G+VYRE+ SP YYDGRYWTMWKLPM+GCTDA+ V KE E YP I+GFDN RQ Q ++FIA KP G Sbjct: 8 SSATAAAPFQGLKSTASLPVARRSTTSLAKV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKE-GFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYP-ELRAILGFDNIRQTQWLTFIAYKPAG 166
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS1_SPIOL (Ribulose bisphosphate carboxylase small chain OS=Spinacia oleracea GN=RBCS PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.868e-46 Identity = 86/122 (70.49%), Postives = 99/122 (81.15%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 M+VWPP GLKKFETLSYLPPL+ E LL E+NYL+ GWIP LEFE++ G+VYREH KSPGYYDGRYWTMWKLPM+G TD V+ E EV K P +FVR IGF++KR+VQCISFIA KP G Sbjct: 1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPGYYDGRYWTMWKLPMFGGTDPAQVVNEVEEVKKAPPDAFVRFIGFNDKREVQCISFIAYKPAG 122
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS3_WHEAT (Ribulose bisphosphate carboxylase small chain clone 512 (Fragment) OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.298e-43 Identity = 78/107 (72.90%), Postives = 93/107 (86.92%), Query Frame = 3 Query: 255 SYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 +YLPPLS EALLK+++YLIRS W+PCLEF + G+++REH+ SPGYYDGRYWTMWKLPM+GCTDAT V+ E EV KEYP ++VRIIGFDN RQVQC+SFIA KPPG Sbjct: 1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 106
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS_MARPA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.253e-42 Identity = 87/178 (48.88%), Postives = 115/178 (64.61%), Query Frame = 3 Query: 39 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEY-PHSFVRIIGFDNKRQVQCISFIAAKP 569 +S+++SA V T AS A + + +++ + T +NG RV CM+VW P KFETLSYLPPLS +AL K+I+Y+I+SGW PC+EF+++ G V RE PGYYDGRYWTMWKLPM+GCTD+ VL+E E K Y ++R +GFDN RQVQC SFI +P Sbjct: 2 ASVVASAAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQ-GTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFIVHQP 178
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.896e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+ VL+E E + YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 262 HSP 2 Score: 135.961 bits (341), Expect = 2.896e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+ VL+E E + YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 279 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 406 HSP 3 Score: 135.961 bits (341), Expect = 2.896e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+ VL+E E + YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 566 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 693 HSP 4 Score: 135.961 bits (341), Expect = 2.896e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+ VL+E E + YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 836 HSP 5 Score: 135.961 bits (341), Expect = 2.896e-31 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+ VL+E E + YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 997 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 1124 HSP 6 Score: 134.035 bits (336), Expect = 1.100e-30 Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD YWTMWKLPM+GCTDA+ VL+E E + YP +VR+ FD+ +QVQ ISF+ +P G Sbjct: 422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRPSG 549 HSP 7 Score: 134.035 bits (336), Expect = 1.100e-30 Identity = 63/126 (50.00%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKP 569 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+ VL+E E + YP +VR+ FD+ +QVQ ISF+ +P Sbjct: 1141 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFDSVKQVQVISFVVQRP 1266 HSP 8 Score: 131.724 bits (330), Expect = 5.462e-30 Identity = 64/128 (50.00%), Postives = 84/128 (65.62%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHH-----KSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPPG 575 MKVW P KKFET SYLPPLSD + K+++ +I G PCLEF E ++ ++ + GYYD RYWTMWKLPM+GCTDA+ VL+E E + YP +VR + FD+ +QVQ ISF+ +P G Sbjct: 854 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVR-LAFDSVKQVQVISFVVQRPSG 980 The following BLAST results are available for this feature:
BLAST of EY650097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650097 ID=EY650097; Name=EY650097; organism=Citrus sinensis; type=EST; length=897bpback to top |