EY650097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS2_CHLRE (Ribulose bisphosphate carboxylase small chain 2, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-2 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.452e-31 Identity = 76/179 (42.46%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 51 SSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF-ELEKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKP 569 SS + A A A S V P LK PA K + A+ M VW P K FET SYLPPLSDE + +++Y++ +GWIPCLEF E +K +V E G YYD RYWTMWKLPM+GC D VL+E K +P ++VR++ FDN++QVQ + F+ +P Sbjct: 8 SSVSAAVARPAR----SSVRPMAALK-----PAVKAAPVAAPAQANQ------MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS1_CHLRE (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Chlamydomonas reinhardtii GN=RBCS-1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.100e-30 Identity = 75/179 (41.90%), Postives = 100/179 (55.87%), Query Frame = 3 Query: 51 SSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEF-ELEKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKP 569 SS + A A A S V P LK PA K + A+ M VW P K FET SYLPPL+DE + +++Y++ +GWIPCLEF E +K +V E G YYD RYWTMWKLPM+GC D VL+E K +P ++VR++ FDN++QVQ + F+ +P Sbjct: 8 SSVSAAVARPAR----SSVRPMAALK-----PAVKAAPVAAPAQANQ------MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS_SINAL (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Sinapis alba GN=RBCS PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.452e-30 Identity = 58/77 (75.32%), Postives = 66/77 (85.71%), Query Frame = 3 Query: 342 ELEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 572 ELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ VLKE E KEYP++F+RIIGFDN RQVQCISFIA KPP Sbjct: 1 ELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPP 77
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS_CHLMO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Chlamydomonas moewusii GN=RBCS PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.202e-30 Identity = 56/125 (44.80%), Postives = 82/125 (65.60%), Query Frame = 3 Query: 213 KVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFE------LEKGWVYREHHKSPGYYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKP 569 KVW P K++ET SYLPPL+++ + ++++Y+I +GW PCLEF + R S GYYD RYWTMWKLPM+GCTD + VL+E +P+ ++R++ FDN +QVQC+ F+ +P Sbjct: 30 KVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQVLREVSACQVAFPNVYIRLVAFDNVKQVQCMGFLVQRP 154
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS3_ACECL (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia cliftonii GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 6.038e-29 Identity = 65/152 (42.76%), Postives = 88/152 (57.89%), Query Frame = 3 Query: 141 FPATKKTNNDITSIASNGGRVQC--MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 572 FP K N ASN +C M VW P K FET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD + VL E K +P +++R++ FD RQVQ F+ +PP Sbjct: 22 FPRATKNNK---GFASNAAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 170
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS4_ACECL (Ribulose bisphosphate carboxylase small chain 4, chloroplastic OS=Acetabularia cliftonii GN=RBCS-4 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.112e-28 Identity = 64/157 (40.76%), Postives = 87/157 (55.41%), Query Frame = 3 Query: 120 GLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 572 G SA P + A N R M VW P K FET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD + VL E K +P +++R++ FD RQVQ F+ +PP Sbjct: 15 GCTKPSAVPKVSINRKGFLNTAMNKKRE--MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS5_ACECL (Ribulose bisphosphate carboxylase small chain 5, chloroplastic OS=Acetabularia cliftonii GN=RBCS-5 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.676e-28 Identity = 66/171 (38.60%), Postives = 94/171 (54.97%), Query Frame = 3 Query: 81 ASLAQASMVAPFTGLKSSSAFPATKKTNNDITS-IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 572 A++ ++V G SS+ P S +A R M VW P K FET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD + VL E K +P +++R++ FD RQVQ F+ +PP Sbjct: 3 AAMMNKTIVVSKDGCARSSSIPKVATNKMGFASAVAMKKSRE--MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 171
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS6_ACECL (Ribulose bisphosphate carboxylase small chain 6, chloroplastic OS=Acetabularia cliftonii GN=RBCS-6 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.943e-27 Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 572 M VW P K FET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ + G Y D RYWTMWKLPM+GCTD + VL E K +P +++R++ FD RQVQ F+ +PP Sbjct: 43 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS7_ACECL (Ribulose bisphosphate carboxylase small chain 7, chloroplastic OS=Acetabularia cliftonii GN=RBCS-7 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.313e-27 Identity = 56/127 (44.09%), Postives = 79/127 (62.20%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 572 M VW P K FET SYLPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTD + VL + K +P +++R++ FD RQVQ F+ +PP Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQVQICGFLVHRPP 170
BLAST of EY650097 vs. ExPASy Swiss-Prot
Match: RBS3_ACEAT (Ribulose bisphosphate carboxylase small chain 3, chloroplastic OS=Acetabularia acetabulum GN=RBCS-3 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.327e-27 Identity = 57/127 (44.88%), Postives = 80/127 (62.99%), Query Frame = 3 Query: 210 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLIRSGWIPCLEFEL-EKGWVYREHHKSPG-----YYDGRYWTMWKLPMYGCTDATXVLKEGGEVXKEYPHSFVRIIGFDNKRQVQCISFIAAKPP 572 M VW P K FET S+LPPL+DE + K+++Y++ + W PCLEF ++ + E+ G Y D RYWTMWKLPM+GCTDA+ VL E K +P +++R++ FD RQVQ F+ +PP Sbjct: 43 MMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 169 The following BLAST results are available for this feature:
BLAST of EY650097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650097 ID=EY650097; Name=EY650097; organism=Citrus sinensis; type=EST; length=897bpback to top |