EY650060
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_SERMA (Ribulose-phosphate 3-epimerase OS=Serratia marcescens GN=rpe PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 7.998e-37 Identity = 81/155 (52.26%), Postives = 106/155 (68.39%), Query Frame = 1 Query: 268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729 +++PSILSA+FA+LGE V AG D +H DVMD +VPN+TIGP+V +ALR P+DVHLM+ ++ VPDF KAGA +S H E S H+ RT+ IK+ G KAG+V NPAT LS ++ V+D D+ L+MSVNPGFGGQ I + K Sbjct: 5 LIAPSILSADFARLGEDTANVLAAGGDVVHFDVMDNHYVPNLTIGPMVCEALRNYGITAPIDVHLMVKPVDRIVPDFAKAGASYISFHPEASE--HVDRTIQLIKEHGCKAGLVFNPATPLSYLDYVMDKIDVILLMSVNPGFGGQSFIHGTLDK 157
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_SHIFL (Ribulose-phosphate 3-epimerase OS=Shigella flexneri GN=rpe PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.184e-36 Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D D+ L+MSVNPGFGGQ I + K Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDK 157
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_HAEIN (Ribulose-phosphate 3-epimerase OS=Haemophilus influenzae GN=rpe PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.184e-36 Identity = 79/157 (50.32%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKKSQ 735 +++PSILSA+ A+LG+ V+ V AG D IH DVMD +VPN+T GP V ALR P+DVHLM+ ++ +PDF KAGA+ ++ H E S H+ R+L I+D G K+G+V NPA LS ++ VLD D+ L+MSVNPGFGGQ I + +KK Q Sbjct: 5 LIAPSILSADLARLGDDVQNVLNAGADVIHFDVMDNHYVPNLTFGPAVCQALRDYGITAPIDVHLMVKPVDRIIPDFAKAGANYITFHPESSE--HIDRSLQLIRDCGCKSGLVFNPAMPLSYLDYVLDKVDVVLLMSVNPGFGGQSFIPATLKKLQ 159
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_ECOLI (Ribulose-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=rpe PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.184e-36 Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D D+ L+MSVNPGFGGQ I + K Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDK 157
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_ECOL6 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O6 GN=rpe PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.184e-36 Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D D+ L+MSVNPGFGGQ I + K Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDK 157
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_ECO57 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O157:H7 GN=rpe PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 5.184e-36 Identity = 79/155 (50.97%), Postives = 105/155 (67.74%), Query Frame = 1 Query: 268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV-TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729 +++PSILSA+FA+LGE AG D +H DVMD +VPN+TIGP+V+ +LR P+DVHLM+ ++ VPDF AGA I++ H E S H+ RTL IK+ G KAG+V NPAT LS ++ V+D D+ L+MSVNPGFGGQ I + K Sbjct: 5 LIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASE--HVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDK 157
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_BUCAI (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpe PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.843e-36 Identity = 75/154 (48.70%), Postives = 107/154 (69.48%), Query Frame = 1 Query: 271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVT-DLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729 ++PSILSA+FA+LGE +K V AG D IH DVMD +VPN+++GP+++++LR P+DVHLM+ + +P F KAGA ++ H E +T+H+ RTLN IK+ G KAG+ NPAT L+ ++ +L+ DL L+MSVNPGFG Q + S K Sbjct: 6 LAPSILSADFARLGEDIKKVIDAGSDLIHFDVMDNHYVPNLSMGPMILESLRNYNITAPIDVHLMVKPVDNLIPQFAKAGATFITFHPE--ATLHIERTLNLIKENGCKAGLAFNPATPLNFLDYILEKLDLILLMSVNPGFGNQSFLPSTFNK 157
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_RHORU (Ribulose-phosphate 3-epimerase OS=Rhodospirillum rubrum GN=cbbE PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.715e-34 Identity = 76/155 (49.03%), Postives = 103/155 (66.45%), Query Frame = 1 Query: 265 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729 I ++PS+LSA+FA + + G D +H DVMD +VPN+T+GPLV ALRP T LP+DVHLM + + F +AGAD+++ H E S H+HR++ I+ G KAGV LNPA+ LS ++ +L+ DL LIMSVNPGFGGQ I S + K Sbjct: 5 IRIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLPIDVHLMTRPVDPLIDSFAEAGADMITFHPEASD--HVHRSVQMIRKRGLKAGVALNPASPLSLLDHILEDLDLVLIMSVNPGFGGQSFIPSALPK 157
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_TREPA (Ribulose-phosphate 3-epimerase OS=Treponema pallidum GN=rpe PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 7.007e-33 Identity = 68/153 (44.44%), Postives = 100/153 (65.36%), Query Frame = 1 Query: 271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729 ++PS+LSA+F+ L + +E G W+H+DVMDG FVPN+T G V+ LR T LP DVHLM+ P + DF++AGAD ++ H E + +H HR ++ I+ G K G+ L P+T ++A+ VL DL L+M+VNPGF GQ++I + K Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFDVHLMVSRPADLIEDFVQAGADFLTFHIE--AEVHAHRLIHAIRGRGVKVGISLVPSTPVAALSEVLPFVDLVLVMTVNPGFSGQQMIAHCLSK 157
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_STRCO (Ribulose-phosphate 3-epimerase OS=Streptomyces coelicolor GN=rpe PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.541e-32 Identity = 72/160 (45.00%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKKSQT*EEM 750 ++PSILSA+FA+L ++ KAVE G DW+HVDVMD FVPN+T+G VV++L TD PLD HLMI P++ P +++AGA V+ H E ++ R +I+ GA+A + L PAT + E +L D+ LIM+V PGFGGQ ++ + K + E+ Sbjct: 5 INPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLDCHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAA--PVRLAREIRAKGARASMALKPATPVEPYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIRRTREL 160 The following BLAST results are available for this feature:
BLAST of EY650060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650060 ID=EY650060; Name=EY650060; organism=Citrus sinensis; type=EST; length=905bpback to top |