EY650060

Overview
NameEY650060
Unique NameEY650060
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_MYCTU (Ribulose-phosphate 3-epimerase OS=Mycobacterium tuberculosis GN=rpe PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.021e-31
Identity = 73/161 (45.34%), Postives = 102/161 (63.35%), Query Frame = 1
Query:  268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKKSQT*EEM 750
            +++PSIL+A+FA+L ++  AV   G DW+HVDVMDG FVPN+TIG  VV++L  VTD+P+D HLMI  P++  P + +AGA  V+ H E  +T +       I+  GAKAG+ + P T L     +L   D  L+MSV PGFGGQR I   + K +   +M
Sbjct:    9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKM 165          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_MYCBO (Ribulose-phosphate 3-epimerase OS=Mycobacterium bovis GN=rpe PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.021e-31
Identity = 73/161 (45.34%), Postives = 102/161 (63.35%), Query Frame = 1
Query:  268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKKSQT*EEM 750
            +++PSIL+A+FA+L ++  AV   G DW+HVDVMDG FVPN+TIG  VV++L  VTD+P+D HLMI  P++  P + +AGA  V+ H E  +T +       I+  GAKAG+ + P T L     +L   D  L+MSV PGFGGQR I   + K +   +M
Sbjct:    9 LIAPSILAADFARLADEAAAVN--GADWLHVDVMDGHFVPNLTIGLPVVESLLAVTDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVARDIRAAGAKAGISVKPGTPLEPYLDILPHFDTLLVMSVEPGFGGQRFIPEVLSKVRAVRKM 165          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_CHLTR (Ribulose-phosphate 3-epimerase OS=Chlamydia trachomatis GN=rpe PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.558e-31
Identity = 69/166 (41.57%), Postives = 104/166 (62.65%), Query Frame = 1
Query:  238 RVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKKSQ 735
            R +   K  ++V+PSI+ A+ A +G + + +E +G D IH+DVMDG FVPNIT GP VV A+   T+L L+VH MI  P + V  F+KAGAD + VH E +  I     ++ I+  G +AGV  +P TS+  +   + + D+ L+MSV+PGF GQ+ I   +++ Q
Sbjct:    2 REEAMKKQGVLVAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAENI--KEIISYIQKCGVQAGVAFSPETSIEFVTSFIPLCDVILLMSVHPGFCGQKFIPDTIERIQ 165          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_CHLMU (Ribulose-phosphate 3-epimerase OS=Chlamydia muridarum GN=rpe PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.119e-30
Identity = 67/158 (42.41%), Postives = 101/158 (63.92%), Query Frame = 1
Query:  256 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729
            K  ++++PSI+ A+ A LG+  + +E +G + IH+DVMDG FVPNIT GP ++ A+   TDL L+VH MI  P + V  F+KAGAD + VH E +   +L   L+ I+  G +AG+  +P TS+  I   + + D+ L+MSV PGF GQ+ I   ++K
Sbjct:    3 KQGVLIAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRSTDLFLEVHAMIYTPFEFVEAFVKAGADRIIVHFEAAE--NLKEILDYIRKCGVQAGIAFSPETSIEFISAFIPLCDVILLMSVQPGFCGQKFIPDTIEK 158          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_BUCBP (Ribulose-phosphate 3-epimerase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpe PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.755e-29
Identity = 71/164 (43.29%), Postives = 102/164 (62.20%), Query Frame = 1
Query:  268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP---LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKKSQT*EEM 750
            ++S S+LSANF++LGE +  V  +G D IH DVMD  +V N+T GP+V+++LR V  +    +DVHLM    +  +  F K   +I+S H E  ST ++ +T+  IK  G K G+ LNP T L  ++ VLD  DL L+MSVNPGF GQ+ I S + K +   E+
Sbjct:    5 LLSSSVLSANFSRLGEDIFDVLKSGSDMIHYDVMDNHYVKNLTFGPIVLESLRSVEKIKSMVIDVHLMTCPVDDLIIKFAKLDVNIISFHPE--STNNVEKTIKLIKSYGCKVGLALNPLTPLCVLDNVLDKIDLILLMSVNPGFPGQKFIPSILNKIRIVREL 166          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_MYCLE (Ribulose-phosphate 3-epimerase OS=Mycobacterium leprae GN=rpe PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.598e-29
Identity = 71/161 (44.10%), Postives = 101/161 (62.73%), Query Frame = 1
Query:  268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKKSQT*EEM 750
            +++PSIL+A+FA+L ++   V  A  DW+HVDVMDG FVPN+TIG  VV +L   +D+P+D HLMI  P++  P + +AGA  V+ H E  +T +     + I+  GAKAG+ + P T L+    +L   D  LIMSV PGFGGQ  I   + K +T  +M
Sbjct:    4 LIAPSILAADFARLTDEAAVV--ASADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAE--ATDNPVGVAHDIRTAGAKAGIGVKPGTPLNPYLDILPHFDTLLIMSVEPGFGGQAFIPEVLSKVRTVRKM 160          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_HELPY (Ribulose-phosphate 3-epimerase OS=Helicobacter pylori GN=rpe PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.598e-29
Identity = 66/153 (43.14%), Postives = 101/153 (66.01%), Query Frame = 1
Query:  271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729
            V+PS+LSA+F  L +++++V  A  D++HVDVMDG +VPN+T+GP+V++ +  ++ +PLDVHLM+         F      I+S+H E     H HR L  IK+LG   G+VLNP T   +I+ +L+   L L+MSVNPGFGGQ+ ++  ++K
Sbjct:    3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVPLDVHLMVENASFFAELFAPLKPQIISIHAENEK--HPHRVLQLIKNLGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEK 151          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_CHLPN (Ribulose-phosphate 3-epimerase OS=Chlamydia pneumoniae GN=rpe PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.598e-29
Identity = 64/158 (40.51%), Postives = 98/158 (62.03%), Query Frame = 1
Query:  256 KSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729
            +  ++V PSI+ A+   LG + K +E AG D+IH+D+MDG FVPN+T GP ++ A+   TDL L+VH MI  P + +  F+++GAD + VH E S  I     L+ IK  G +AG+  +P TS+  +   L   D+ ++MSV PGF GQ  + + ++K
Sbjct:    4 QESVLVGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDLFLEVHAMIYNPFEFIESFVRSGADRIIVHFEASEDI--KELLSYIKKCGVQAGLAFSPDTSIEFLPSFLPFCDVVVLMSVYPGFTGQSFLPNTIEK 159          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_HELPJ (Ribulose-phosphate 3-epimerase OS=Helicobacter pylori J99 GN=rpe PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.138e-29
Identity = 65/153 (42.48%), Postives = 100/153 (65.36%), Query Frame = 1
Query:  271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729
            V+PS+LSA+F  L +++++V  A  D++HVDVMDG +VPN+T+GP++++ +  ++ +PLDVHLM+      V  F      I+S+H E     H HR L  IK  G   G+VLNP T   +I+ +L+   L L+MSVNPGFGGQ+ ++  ++K
Sbjct:    3 VAPSLLSADFMHLAKEIESVSNA--DFLHVDVMDGHYVPNLTMGPVILENVTQMSQVPLDVHLMVENASFFVELFAPLNPQIISIHAENEK--HPHRVLQLIKSSGITPGIVLNPHTHEESIKYLLESVGLVLLMSVNPGFGGQKFLDLVLEK 151          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_YEAST (Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae GN=RPE1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.399e-27
Identity = 68/171 (39.77%), Postives = 97/171 (56.73%), Query Frame = 1
Query:  268 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP-------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKKSQT 738
            I++PSIL+++FA LG +   V  AG DW+H+DVMDG FVPNIT+G  +V +LR     P              D H+M+  PE+ V DF K GAD  + H E +   +HL   +  IK  G KA   + P TS+  +  +    D+ L+M+V PGFGGQ+ +E  + K +T
Sbjct:    5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHL---VKLIKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKVET 172          
The following BLAST results are available for this feature:
BLAST of EY650060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
RPE_MYCTU5.021e-3145.34Ribulose-phosphate 3-epimerase OS=Mycobacterium tu... [more]
RPE_MYCBO5.021e-3145.34Ribulose-phosphate 3-epimerase OS=Mycobacterium bo... [more]
RPE_CHLTR6.558e-3141.57Ribulose-phosphate 3-epimerase OS=Chlamydia tracho... [more]
RPE_CHLMU1.119e-3042.41Ribulose-phosphate 3-epimerase OS=Chlamydia murida... [more]
RPE_BUCBP2.755e-2943.29Ribulose-phosphate 3-epimerase OS=Buchnera aphidic... [more]
RPE_MYCLE3.598e-2944.10Ribulose-phosphate 3-epimerase OS=Mycobacterium le... [more]
RPE_HELPY3.598e-2943.14Ribulose-phosphate 3-epimerase OS=Helicobacter pyl... [more]
RPE_CHLPN3.598e-2940.51Ribulose-phosphate 3-epimerase OS=Chlamydia pneumo... [more]
RPE_HELPJ6.138e-2942.48Ribulose-phosphate 3-epimerase OS=Helicobacter pyl... [more]
RPE_YEAST4.399e-2739.77Ribulose-phosphate 3-epimerase OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-G04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650060 ID=EY650060; Name=EY650060; organism=Citrus sinensis; type=EST; length=905bp
AAACGAACGAAAACAGATACCATATTTCCTCTCACTAGCCATAACCAAAC
CAACAGTTACGTTTTATAGAGAGAAACAAAAAAAAGCGTCAAGATGTCTA
CAGGCTCGCTGTGTTCATCAACGACTCATATCAATGGCTTTACAGGTGGT
TTCATGTTGCAGAAAACCAATCTTAATCAGCCCAGTTCACTTAGTTTTAC
AAGGGGGAGAATTCATACTATAGTGAAGGCATCAGCTCGTGTGGATAAGT
TCTCGAAAAGTGATATTATTGTTTCTCCATCTATTCTCTCTGCTAATTTC
GCGAAGTTAGGCGAGCAGGTAAAAGCAGTGGAATTGGCTGGTTGTGATTG
GATTCATGTTGATGTCATGGATGGTCGTTTTGTTCCAAACATTACAATTG
GACCTCTTGTGGTTGATGCCTTGCGCCCTGTGACAGACCTTCCTTTGGAT
GTTCATTTGATGATTGTCGAACCTGAACAACGAGTGCCTGATTTTATCAA
GGCTGGAGCAGACATAGTCAGCGTCCACTGTGAGCAATCATCCACCATTC
ATTTGCACCGCACTCTTAACCAAATAAAAGATTTGGGAGCTAAAGCTGGA
GTTGTCCTTAACCCTGCTACCTCACTGAGTGCAATAGAATGTGTCCTTGA
TGTGGNTGATCTTTGTCTGATCATGTCNGTGAACCCTGGCTTTGGTGGGC
AAAGGCTTATTGAGAGCCAAGTAAAAAAATCTCAGACTTGAGAAGAAATG
TGTTAGAGGAGGGAGTAAACCCATGATTGAATANATGGGGNAGTAGGTCC
NAAAATGCATATANGGTATTGAAGCTGCGCTATGCCNTGGTTGCTGGTCA
NCTGTCTTTGAGCTAAGATATGCTGAACTTTAAGGGATAAACCANCAAAG
CACAG
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