EY650060

Overview
NameEY650060
Unique NameEY650060
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: RPE_ENCCU (Ribulose-phosphate 3-epimerase OS=Encephalitozoon cuniculi GN=RPE1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.468e-14
Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 1
Query:  280 SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH---CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQRLIESQVKK 729
            SIL  NF  L E++  ++  G   IH+DVMD  FV NIT GP +++ +    D   DVH+M+  P   +         +V++H   C+++      R  N +       G+ LNP T +   E  +   D  LIMSV PGFGGQ+  E  + K
Sbjct:   13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHMMVESPLDIIMQIDLERVSLVTIHSEVCDKAGVAEYLRKRNVL------FGIALNPETQVDDAE--MRSADFVLIMSVKPGFGGQKFQEECLAK 156          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: LSRE_SALPA (Putative epimerase lsrE OS=Salmonella paratyphi A GN=lsrE PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.722e-13
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 1
Query:  271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQ 702
            +S  IL+  +  L   ++ +E      +H+D+MDG+F P  T+GP  V+ L P T +  DVHLM+ +        +KAGA  +++  E    IHLH TL+ +          ++    G+ L PAT L  I  +L   ++  +++VNPG+G +
Sbjct:   22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVEQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: LSRE_SALTY (Putative epimerase lsrE OS=Salmonella typhimurium GN=lsrE PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQ 702
            +S  IL+  +  L   ++ +E      +H+D+MDG+F P  T+GP  V  L P T +  DVHLM+ +        +KAGA  +++  E    IHLH TL+ +          ++    G+ L PAT L  I  +L   ++  +++VNPG+G +
Sbjct:   22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: LSRE_SALTI (Putative epimerase lsrE OS=Salmonella typhi GN=lsrE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQ 702
            +S  IL+  +  L   ++ +E      +H+D+MDG+F P  T+GP  V  L P T +  DVHLM+ +        +KAGA  +++  E    IHLH TL+ +          ++    G+ L PAT L  I  +L   ++  +++VNPG+G +
Sbjct:   22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWAAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: LSRE_SALPB (Putative epimerase lsrE OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lsrE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQ 702
            +S  IL+  +  L   ++ +E      +H+D+MDG+F P  T+GP  V  L P T +  DVHLM+ +        +KAGA  +++  E    IHLH TL+ +          ++    G+ L PAT L  I  +L   ++  +++VNPG+G +
Sbjct:   22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170          
BLAST of EY650060 vs. ExPASy Swiss-Prot
Match: LSRE_SALCH (Putative epimerase lsrE OS=Salmonella choleraesuis GN=lsrE PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.052e-12
Identity = 48/153 (31.37%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  271 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVXDLCLIMSVNPGFGGQ 702
            +S  IL+  +  L   ++ +E      +H+D+MDG+F P  T+GP  V  L P T +  DVHLM+ +        +KAGA  +++  E    IHLH TL+ +          ++    G+ L PAT L  I  +L   ++  +++VNPG+G +
Sbjct:   22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170          
The following BLAST results are available for this feature:
BLAST of EY650060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
RPE_ENCCU1.468e-1433.99Ribulose-phosphate 3-epimerase OS=Encephalitozoon ... [more]
LSRE_SALPA4.722e-1331.37Putative epimerase lsrE OS=Salmonella paratyphi A ... [more]
LSRE_SALTY1.052e-1231.37Putative epimerase lsrE OS=Salmonella typhimurium ... [more]
LSRE_SALTI1.052e-1231.37Putative epimerase lsrE OS=Salmonella typhi GN=lsr... [more]
LSRE_SALPB1.052e-1231.37Putative epimerase lsrE OS=Salmonella paratyphi B ... [more]
LSRE_SALCH1.052e-1231.37Putative epimerase lsrE OS=Salmonella choleraesuis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-G04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650060 ID=EY650060; Name=EY650060; organism=Citrus sinensis; type=EST; length=905bp
AAACGAACGAAAACAGATACCATATTTCCTCTCACTAGCCATAACCAAAC
CAACAGTTACGTTTTATAGAGAGAAACAAAAAAAAGCGTCAAGATGTCTA
CAGGCTCGCTGTGTTCATCAACGACTCATATCAATGGCTTTACAGGTGGT
TTCATGTTGCAGAAAACCAATCTTAATCAGCCCAGTTCACTTAGTTTTAC
AAGGGGGAGAATTCATACTATAGTGAAGGCATCAGCTCGTGTGGATAAGT
TCTCGAAAAGTGATATTATTGTTTCTCCATCTATTCTCTCTGCTAATTTC
GCGAAGTTAGGCGAGCAGGTAAAAGCAGTGGAATTGGCTGGTTGTGATTG
GATTCATGTTGATGTCATGGATGGTCGTTTTGTTCCAAACATTACAATTG
GACCTCTTGTGGTTGATGCCTTGCGCCCTGTGACAGACCTTCCTTTGGAT
GTTCATTTGATGATTGTCGAACCTGAACAACGAGTGCCTGATTTTATCAA
GGCTGGAGCAGACATAGTCAGCGTCCACTGTGAGCAATCATCCACCATTC
ATTTGCACCGCACTCTTAACCAAATAAAAGATTTGGGAGCTAAAGCTGGA
GTTGTCCTTAACCCTGCTACCTCACTGAGTGCAATAGAATGTGTCCTTGA
TGTGGNTGATCTTTGTCTGATCATGTCNGTGAACCCTGGCTTTGGTGGGC
AAAGGCTTATTGAGAGCCAAGTAAAAAAATCTCAGACTTGAGAAGAAATG
TGTTAGAGGAGGGAGTAAACCCATGATTGAATANATGGGGNAGTAGGTCC
NAAAATGCATATANGGTATTGAAGCTGCGCTATGCCNTGGTTGCTGGTCA
NCTGTCTTTGAGCTAAGATATGCTGAACTTTAAGGGATAAACCANCAAAG
CACAG
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