EY650055

Overview
NameEY650055
Unique NameEY650055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY650055_ssr102 microsatellite EY650055_ssr102:102..111. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP4_HUMAN (Histone-binding protein RBBP4 OS=Homo sapiens GN=RBBP4 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 7.866e-18
Identity = 68/198 (34.34%), Postives = 100/198 (50.51%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K  +  RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+   + L+  P    ++LS S D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPD--PSGECNPDLRLRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLW 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP4_CHICK (Histone-binding protein RBBP4 OS=Gallus gallus GN=RBBP4 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 7.866e-18
Identity = 68/198 (34.34%), Postives = 100/198 (50.51%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K  +  RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+   + L+  P    ++LS S D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPD--PSGECNPDLRLRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLW 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP4_BOVIN (Histone-binding protein RBBP4 OS=Bos taurus GN=RBBP4 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 7.866e-18
Identity = 68/198 (34.34%), Postives = 100/198 (50.51%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K  +  RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+   + L+  P    ++LS S D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPD--PSGECNPDLRLRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLW 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: CAF1_DROME (Probable histone-binding protein Caf1 OS=Drosophila melanogaster GN=Caf1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.342e-17
Identity = 67/199 (33.67%), Postives = 100/199 (50.25%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N L+IA+ ++  P   A    S ++ E +  F         ++    I H GEVNR R +PQN+ ++AT T S DVL++D    P +     + +  PDL L GHQ+   + L+  P    Y+LS S D ++ LW
Sbjct:   18 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDE-QNHLLIASVQL--PSEDAQFDGSHYDNE-KGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE--PSGECQPDLRLRGHQKEG-YGLSWNPNLNGYLLSASDDHTICLW 209          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_XENTR (Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.752e-17
Identity = 68/213 (31.92%), Postives = 100/213 (46.95%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLWSXQEHVSALAADPRSAK 624
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    +L   T  S   N LV+A  ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + D  PDL L GHQ+             ++LS S D ++ LW        ++A P+  K
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQI--PNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPD--PSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWD-------ISAGPKEGK 214          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP4_XENTR (Histone-binding protein RBBP4 OS=Xenopus tropicalis GN=rbbp4 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.289e-17
Identity = 68/198 (34.34%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K  +  RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+   + L+  P     +LS S D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPD--PSGECNPDLRLRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLW 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP4_PONAB (Histone-binding protein RBBP4 OS=Pongo abelii GN=RBBP4 PE=2 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.989e-17
Identity = 67/198 (33.84%), Postives = 100/198 (50.51%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ +  WK   P LYD +  H L WPSL+ +W P + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+   + L+  P    ++LS S D ++ LW
Sbjct:   14 ERVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPD--PSGECNPDLRLRGHQKEG-YGLSWNPNLSGHLLSASDDHTICLW 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_CANGA (Histone acetyltransferase type B subunit 2 OS=Candida glabrata GN=HAT2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.989e-17
Identity = 59/189 (31.22%), Postives = 89/189 (47.09%), Query Frame = 1
Query:   19 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEV---VKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPY-VLSGSKDKSMVLW 573
            +VD+ Y  WKS VP+LYD+++   L WP+L+  W PQ      + RQ+L L   T G   N L I   ++   V         I + +E+     VK  K   H GE+ R R +PQ+  I+AT      + I+D  ++    A+L   + H +           + LA    E Y +LSGS D ++ LW
Sbjct:   29 TVDEEYELWKSNVPMLYDFVSETRLTWPTLTVEWLPQKNLVAARTRQQLILGTHTSGEEQNYLKIGAVDLPVEVTENSKKDREIDEEDEDMVLSNVKIVKKFPHDGEITRARYMPQDDNIIATINGEGKIFIYD-RSKNGVEALLSTLEYHTE---------NGYGLAFNANEKYSLLSGSDDSNIALW 207          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBP4B_XENLA (Histone-binding protein RBBP4-B OS=Xenopus laevis GN=rbbp4-B PE=1 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 3.904e-17
Identity = 68/198 (34.34%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K  +  RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+   + L+  P     +LS S D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSCDVLVFDYTKHPSKPD--PSGECNPDLRLRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLW 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_XENLA (Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.904e-17
Identity = 68/213 (31.92%), Postives = 100/213 (46.95%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLWSXQEHVSALAADPRSAK 624
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K+    +L   T  S   N LV+A  +V  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + +  PDL L GHQ+             ++LS S D ++ LW        ++A P+  K
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSDEQNHLVVARVQV--PNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPD--PSGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWD-------ISAGPKEGK 214          
The following BLAST results are available for this feature:
BLAST of EY650055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
RBBP4_HUMAN7.866e-1834.34Histone-binding protein RBBP4 OS=Homo sapiens GN=R... [more]
RBBP4_CHICK7.866e-1834.34Histone-binding protein RBBP4 OS=Gallus gallus GN=... [more]
RBBP4_BOVIN7.866e-1834.34Histone-binding protein RBBP4 OS=Bos taurus GN=RBB... [more]
CAF1_DROME1.342e-1733.67Probable histone-binding protein Caf1 OS=Drosophil... [more]
RBBP7_XENTR1.752e-1731.92Histone-binding protein RBBP7 OS=Xenopus tropicali... [more]
RBBP4_XENTR2.289e-1734.34Histone-binding protein RBBP4 OS=Xenopus tropicali... [more]
RBBP4_PONAB2.989e-1733.84Histone-binding protein RBBP4 OS=Pongo abelii GN=R... [more]
HAT2_CANGA2.989e-1731.22Histone acetyltransferase type B subunit 2 OS=Cand... [more]
RBP4B_XENLA3.904e-1734.34Histone-binding protein RBBP4-B OS=Xenopus laevis ... [more]
RBBP7_XENLA3.904e-1731.92Histone-binding protein RBBP7 OS=Xenopus laevis GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-F10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650055 ID=EY650055; Name=EY650055; organism=Citrus sinensis; type=EST; length=873bp
CGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACACAATGGAAGTC
CTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAACCTCGTTTGGC
CCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAGCTACATACAAG
AATCGCCAACGTCTTTACCTTTCTGAACAGACTGATGGCAGTGTTCCAAA
TACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCGAGTTGCAGCTG
CAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCACCCTTTGTAAAG
AAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGAATAAGAGAACT
CCCACAGAACAGTAAAATAGTAGCCACACACACTGATAGTCCTGATGTCC
TCATTTGGGATGGTGAGGCACAACCTANTCGCCATGCTGTCTTANGAGCT
GCTGATTCTCATCCAGATCTGATATTGACCGGCCATCAAGAATATGCTGA
ATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCTCTCTGGAAGCA
AGGATAAGTCAATGGTTTTATGGAGCATNCAAGAACATGTCTCCGCTTTG
GCAGCAGACCCCAGGTCTGCAAAATCTACAGCTCTTGGCGTGCCAACTCT
AAAATGCTTNCAGAAGTGTGGGAATGGGGATAACCTCTANAGAGCCTTCT
ATGGGGCACGAAGTAATACCTAGGCATGAGACCTGTGGAAAACGTCAGTT
CTGTCATCAGGCACAGAGTTCTGAGTGTAGTGATGATTCTGCCTATCTAT
GGATGCCAGACTGCTCTCTNCACTGTCAGGNTGAGAAGCCATATGCGAAT
NCATGGGGTGATGGAATCCCAGA
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