EY650055

Overview
NameEY650055
Unique NameEY650055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY650055_ssr102 microsatellite EY650055_ssr102:102..111. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_CHICK (Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.098e-17
Identity = 67/210 (31.90%), Postives = 102/210 (48.57%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVK-PRVAAAEHISQFNEEARSPFVK-KFKT---IIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLWSXQEHVSALAADPRSAK 624
            ER + + Y  WK   P LYD +  H L WPSL+ +W P + +   K+    +L   T  S   N LV+A  ++    +   +++ S+  E      V  K +T   I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+           + ++LS S D ++ LW        ++A P+  K
Sbjct:   13 ERVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSDEQNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPD--PSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWD-------ISAGPKEGK 213          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_ASPFU (Histone acetyltransferase type B subunit 2 OS=Aspergillus fumigatus GN=hat2 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.098e-17
Identity = 60/204 (29.41%), Postives = 98/204 (48.04%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE-----------ARSPFVKKF---KTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCP-TEPYVLSGSKDKSMVLW 573
            E+ +++ Y  WK   P LYD + +  L WP+L+ +W P  ++   K  +  RL +   T     N L IA+ ++  P   +A +   ++EE            ++P   KF   + I H GEVN+ R  PQN  I+AT      V++WD      +H  L     +P + L GH +   F L+  P T   + +GS+DK++ +W
Sbjct:   22 EKIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQEVPDKPYSTHRLLIGTHTSSDAQNYLQIAHVQLPNP---SAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQNPNIIATMCTDGRVMVWDRS----KHPSLPTGQVNPQMELIGHTKEG-FGLSWSPHTAGQLATGSEDKTVRIW 217          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP4_DANRE (Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 8.696e-17
Identity = 67/198 (33.84%), Postives = 98/198 (49.49%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P + +   K  +  RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T + DVL++D    P +     + +  PDL L GHQ+   + L+  P     +LS S D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPD--PSGECTPDLRLRGHQKEG-YGLSWNPNLRSCLLSASDDHTICLW 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_BOVIN (Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.316e-16
Identity = 63/196 (32.14%), Postives = 94/196 (47.96%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +  P   A    S  + E        + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+             ++LS S D ++ LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHI--PNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPD--PSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: MSI3_ARATH (WD-40 repeat-containing protein MSI3 OS=Arabidopsis thaliana GN=MSI3 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.316e-16
Identity = 62/200 (31.00%), Postives = 94/200 (47.00%), Query Frame = 1
Query:   22 VDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQ----LEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLWSXQEHVSALAAD 609
            V++ ++ WK   P LYD + +H L WPSL+  W P       +  Y    +L L   T G   + L++A  +VV P   A   +   ++E   P V+  + I   GEVNR R +PQ   +V   T   +V ++D      +      ++  PDL L GH++           E Y+LSGS+D+ + LW     VSA A D
Sbjct:   15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSGGAQDFLMVA--DVVIPTPDAEPGLGGRDQEPIVPKVEIKQKIRVDGEVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKP---QTSECDPDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWD----VSATATD 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_RAT (Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 62/194 (31.96%), Postives = 92/194 (47.42%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+             ++LS S D ++ LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPD--PSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_MOUSE (Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 62/194 (31.96%), Postives = 92/194 (47.42%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+             ++LS S D ++ LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPD--PSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_MACFA (Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 62/194 (31.96%), Postives = 92/194 (47.42%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+             ++LS S D ++ LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPD--PSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_HUMAN (Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 62/194 (31.96%), Postives = 92/194 (47.42%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S DVL++D    P +     + + +PDL L GHQ+             ++LS S D ++ LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPD--PSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_SCHPO (Histone acetyltransferase type B subunit 2 OS=Schizosaccharomyces pombe GN=mis16 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.362e-16
Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 1
Query:   10 MERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLE--QATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEAR---SPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEP-YVLSGSKDKSMVLWSXQ 582
            +++++ + Y  WK  VP LYD +  H L WPSL+ +W P  +    T  + QRL L   T G+  N L IA+ ++        E        A+   S  ++  + I H G+VNR R +PQ  +I+AT  +  +  I+D       H  L   ++ P  +L GH     F L   P  P  + +G++D+ + LW  Q
Sbjct:   22 LQKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSIQRLILGTHTSGNDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATGSYTIEISQKIPHDGDVNRARYMPQKPEIIATMGEGGNAYIFDTTC----HDALTTGEALPQAVLKGHTAEG-FGLCWNPNLPGNLATGAEDQVICLWDVQ 213          
The following BLAST results are available for this feature:
BLAST of EY650055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
RBBP7_CHICK5.098e-1731.90Histone-binding protein RBBP7 OS=Gallus gallus GN=... [more]
HAT2_ASPFU5.098e-1729.41Histone acetyltransferase type B subunit 2 OS=Aspe... [more]
RBBP4_DANRE8.696e-1733.84Histone-binding protein RBBP4 OS=Danio rerio GN=rb... [more]
RBBP7_BOVIN4.316e-1632.14Histone-binding protein RBBP7 OS=Bos taurus GN=RBB... [more]
MSI3_ARATH4.316e-1631.00WD-40 repeat-containing protein MSI3 OS=Arabidopsi... [more]
RBBP7_RAT5.637e-1631.96Histone-binding protein RBBP7 OS=Rattus norvegicus... [more]
RBBP7_MOUSE5.637e-1631.96Histone-binding protein RBBP7 OS=Mus musculus GN=R... [more]
RBBP7_MACFA5.637e-1631.96Histone-binding protein RBBP7 OS=Macaca fascicular... [more]
RBBP7_HUMAN5.637e-1631.96Histone-binding protein RBBP7 OS=Homo sapiens GN=R... [more]
HAT2_SCHPO7.362e-1629.95Histone acetyltransferase type B subunit 2 OS=Schi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-F10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650055 ID=EY650055; Name=EY650055; organism=Citrus sinensis; type=EST; length=873bp
CGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACACAATGGAAGTC
CTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAACCTCGTTTGGC
CCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAGCTACATACAAG
AATCGCCAACGTCTTTACCTTTCTGAACAGACTGATGGCAGTGTTCCAAA
TACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCGAGTTGCAGCTG
CAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCACCCTTTGTAAAG
AAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGAATAAGAGAACT
CCCACAGAACAGTAAAATAGTAGCCACACACACTGATAGTCCTGATGTCC
TCATTTGGGATGGTGAGGCACAACCTANTCGCCATGCTGTCTTANGAGCT
GCTGATTCTCATCCAGATCTGATATTGACCGGCCATCAAGAATATGCTGA
ATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCTCTCTGGAAGCA
AGGATAAGTCAATGGTTTTATGGAGCATNCAAGAACATGTCTCCGCTTTG
GCAGCAGACCCCAGGTCTGCAAAATCTACAGCTCTTGGCGTGCCAACTCT
AAAATGCTTNCAGAAGTGTGGGAATGGGGATAACCTCTANAGAGCCTTCT
ATGGGGCACGAAGTAATACCTAGGCATGAGACCTGTGGAAAACGTCAGTT
CTGTCATCAGGCACAGAGTTCTGAGTGTAGTGATGATTCTGCCTATCTAT
GGATGCCAGACTGCTCTCTNCACTGTCAGGNTGAGAAGCCATATGCGAAT
NCATGGGGTGATGGAATCCCAGA
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