EY650055

Overview
NameEY650055
Unique NameEY650055
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY650055_ssr102 microsatellite EY650055_ssr102:102..111. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBP4A_XENLA (Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-A PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 9.615e-16
Identity = 65/198 (32.83%), Postives = 98/198 (49.49%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W   + +   K+    RL L   T     N LVIA+ ++  P   A    S ++ E        + S  ++    I H GEVNR R +PQN  I+AT T + DVL++D    P +     + + +P+L L GHQ+   + L+  P     +LS S D ++ LW
Sbjct:   14 ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKDFSIHRLVLGTHTSDE-QNHLVIASVQL--PNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPD--PSGECNPNLRLRGHQKEG-YGLSWNPNLSGNLLSASDDHTICLW 205          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBP7_PONAB (Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.654e-15
Identity = 61/194 (31.44%), Postives = 91/194 (46.91%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS-VPNTLVIANCEVVKPRVA-AAEHISQFNEE-----ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSGSKDKSMVLW 573
            ER +++ Y  WK   P LYD +  H L WPSL+ +W P++ +   K+    +L   T  S   N LV+A   +        A H      E     + +  ++    I H GEVNR R +PQN  I+AT T S  VL++D    P +     + + +PDL L GHQ+             ++LS S D ++ LW
Sbjct:   13 ERVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDEQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPD--PSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLW 204          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: RBBD_DICDI (Probable histone-binding protein rbbD OS=Dictyostelium discoideum GN=rbbD PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.140e-15
Identity = 59/197 (29.95%), Postives = 94/197 (47.72%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYK--NRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEAR-------SPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCP-TEPYVLSGSKDKSMVLW 573
            E+ +++ Y  WK   P LYD +  H L WPSL+  W P       K  + +++ L   T     N L++A   +     A+ E +   + +         S  ++  + I H GEVNR R +PQN  I+AT T S +V I+D    P            P+L LTGH++   + ++  P  E ++LS S D+S+ +W
Sbjct:   10 EKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEKVILGTHTSDEEQNYLMVAKVHLPVDE-ASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPT--PDGKCSPNLKLTGHKKEG-YGISWNPRKEGHLLSCSDDQSICMW 202          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: LIN53_CAEBR (Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae GN=lin-53 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.063e-14
Identity = 65/205 (31.71%), Postives = 95/205 (46.34%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE--------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLWSXQEHVSA 597
            +R  +D Y  WK   P LYD +  H L WPSLS +W P++E+ +  +   RL L   T     + L+   C    P   A    S+++ E        A +  V+    I H GEVNR R +PQ   I+AT + S DV I+D    P   +V      +P L L GH +   + L+  P  E  +LS S D+++  W    +  A
Sbjct:   11 DRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKESSDHTVHRLILGTHTSDEQNHLLISKIC---MPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYP---SVPKDNTFNPLLKLKGHTKEG-YGLSWNPNKEGLILSASDDQTVCHWDINGNAGA 208          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_USTMA (Histone acetyltransferase type B subunit 2 OS=Ustilago maydis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14
Identity = 61/211 (28.91%), Postives = 97/211 (45.97%), Query Frame = 1
Query:   25 DDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEH-------ISQFNEE-----------ARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADS--HPDLILTGHQEYAEFALAMCP-TEPYVLSGSKDKSMVLWSXQEH 588
            ++ Y  WK   P LYD +  H L WPSL+C+W P  E    ++  + RL L   T G   N L  A  ++       A +       + Q++E+           AR   V+K   I H GE+NR R  PQN  ++AT + +    I+D      +H+   +AD    PD+IL G Q    + L+  P  + ++L+ S+D ++  W    +
Sbjct:   72 NEEYKIWKKNSPFLYDLVVTHALEWPSLTCQWLPDKESPAGQSYTQHRLLLGTHTSGQDQNYLQFAQVQLPTTGADGASNSAESRLDLKQYDEDKGEIGSYSATTARLSIVQK---INHDGEINRARYCPQNCDLIATRSVTGKTYIFD----RTKHSNTPSADGVCRPDIILEG-QHKEGYGLSWSPLKQGHILAASEDTTVCHWDINNY 274          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_ENCCU (Histone acetyltransferase type B subunit 2 OS=Encephalitozoon cuniculi GN=HAT2 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.040e-14
Identity = 55/181 (30.39%), Postives = 82/181 (45.30%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQL--EQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF-VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVLSG 546
            ++ V++ Y  WK  VP LYD + +H L WPSLS +W P +  ++   +  QRL LS  T GS    ++IA  E         E     NEE      +K  + I    E NR+R  P    ++A  +D PD+ ++D         +       PD++L GH     F L+     P  L+G
Sbjct:    8 QKIVNEEYKIWKKNVPYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGRTTQRLLLSTHTSGSEEEYILIAKVEF------PDEFDESLNEEVGGDMRLKIIQRISIMDEANRVRYNPSACNVLAVRSDLPDIHVYDYTKHLSHEKI-----PRPDMVLRGHSA-GGFGLSWNHLNPGELAG 176          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: LIN53_CAEEL (Probable histone-binding protein lin-53 OS=Caenorhabditis elegans GN=lin-53 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 63/199 (31.66%), Postives = 93/199 (46.73%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNR-QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLI-LTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            +R  +D Y  WK   P LYD +  H L WPSLS +W P + +    +   RL L   T     + L+   C    P   A    S+++ E RS +         V+    I H GEVNR R +PQ S I+AT +   DV I+D      +H+ +   ++   LI L GH +   + L+  P  E  +LS S D+++  W
Sbjct:   11 DRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHRLILGTHTSDEQNHLLISKIC---MPTDDAQFDASRYDTE-RSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFD----YLKHSAVPRDNTFNPLIRLKGHTKEG-YGLSWNPNKEGLILSASDDQTVCHW 200          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_GIBZE (Histone acetyltransferase type B subunit 2 OS=Gibberella zeae GN=HAT2 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13
Identity = 69/216 (31.94%), Postives = 97/216 (44.91%), Query Frame = 1
Query:   13 ERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQ--RLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEE-------ARSPFVKKFKTII-----HPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPTEPYVL-SGSKDKSMVLWSXQEHVSALAADPR 615
            ER +++ Y  WK   P L        L WP+L+ +W P +++   KN +  RL L   T    PN L IA+ ++ K     A +   ++EE        +S  V   K  I     HPGEVN+ R  PQN  I+AT      +LI+D    P         ++  +L+  GH E   F L   P E   L SGS+D +M LW     +  L AD R
Sbjct:   15 ERLINEEYKTWKKNSPFLTA------LTWPTLTVQWFPDVKEPEGKNYKIHRLLLGTHTSDESPNYLQIADVQIPK---VVAPNPDDYDEERGEIGGYGKSGDVAAIKCDIVQRIEHPGEVNKARYQPQNPDILATLCVDGKILIFDRTKHPLDPTSTGKVNAQIELV--GH-EAEGFGLNWNPHEEGCLASGSEDTTMRLWD----LKTLKADSR 214          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: YEC6_SCHPO (Uncharacterized WD repeat-containing protein C25H1.06 OS=Schizosaccharomyces pombe GN=SPAC25H1.06 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.950e-13
Identity = 47/174 (27.01%), Postives = 83/174 (47.70%), Query Frame = 1
Query:    4 KGMERSVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN--RQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEA---------RSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQE 492
            K +E  + + + +WK     LY+ L    L WPSLS +W   +E  T K   + RL L       +PN L +A+ ++        + +  +NE+           S   +  + I+H G+VNR+R +PQN  I+AT +   +  I+D      ++  + A +  P++ L GH++
Sbjct:   14 KFLENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAAEGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNRVRHMPQNPNIIATMSSCGNAYIFD----RTKYTSMPAEEFLPNISLIGHKK 183          
BLAST of EY650055 vs. ExPASy Swiss-Prot
Match: HAT2_KLULA (Histone acetyltransferase type B subunit 2 OS=Kluyveromyces lactis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.950e-13
Identity = 58/198 (29.29%), Postives = 92/198 (46.46%), Query Frame = 1
Query:   19 SVDDRYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN-----RQRLYLSEQTDGSVPNTLVIA------NCEVVKPRVA-AAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDGEAQPXRHAVLXAADSHPDLILTGHQEYAEFALAMCPT-EPYVLSGSKDKSMVLW 573
            ++++ Y  W S VP++YD+++   L WPSL+ +W P   Q    +     RQ L +   T  + PN L IA      N    KP V+  A+     + +++   V+KFK   H  EV R R +PQ+  I+AT   +  V I+D   +   H  + +   H +           + LA  PT    +LS S D ++ LW
Sbjct:   12 TINEEYDLWVSNVPMMYDFVSETRLTWPSLTVQWLPTEMQPREVDGQQLLRQELLIGTLTTDNEPNYLKIAAIDLPENVTSSKPSVSDDAKENELSHRQSKIKIVRKFK---HEQEVTRARYMPQSPNIIATLNGAGIVYIFDRNIKEKDHGAIASFSYHKE---------NGYGLAFNPTVSGQLLSASDDGTVALW 197          
The following BLAST results are available for this feature:
BLAST of EY650055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
RBP4A_XENLA9.615e-1632.83Histone-binding protein RBBP4-A OS=Xenopus laevis ... [more]
RBBP7_PONAB3.654e-1531.44Histone-binding protein RBBP7 OS=Pongo abelii GN=R... [more]
RBBD_DICDI8.140e-1529.95Probable histone-binding protein rbbD OS=Dictyoste... [more]
LIN53_CAEBR1.063e-1431.71Probable histone-binding protein lin-53 OS=Caenorh... [more]
HAT2_USTMA1.813e-1428.91Histone acetyltransferase type B subunit 2 OS=Usti... [more]
HAT2_ENCCU4.040e-1430.39Histone acetyltransferase type B subunit 2 OS=Ence... [more]
LIN53_CAEEL5.833e-1331.66Probable histone-binding protein lin-53 OS=Caenorh... [more]
HAT2_GIBZE5.833e-1331.94Histone acetyltransferase type B subunit 2 OS=Gibb... [more]
YEC6_SCHPO9.950e-1327.01Uncharacterized WD repeat-containing protein C25H1... [more]
HAT2_KLULA9.950e-1329.29Histone acetyltransferase type B subunit 2 OS=Kluy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-F10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650055 ID=EY650055; Name=EY650055; organism=Citrus sinensis; type=EST; length=873bp
CGCAAAGGAATGGAAAGATCGGTTGATGATAGATACACACAATGGAAGTC
CTTAGTTCCTGTGCTCTATGACTGGCTCGCCAATCACAACCTCGTTTGGC
CCTCTCTCTCTTGCAGATGGGGTCCACAACTTGAGCAAGCTACATACAAG
AATCGCCAACGTCTTTACCTTTCTGAACAGACTGATGGCAGTGTTCCAAA
TACTCTTGTAATAGCAAACTGTGAGGTTGTCAAGCCTCGAGTTGCAGCTG
CAGAGCACATATCACAGTTCAATGAAGAAGCACGCTCACCCTTTGTAAAG
AAATTTAAAACAATCATACATCCTGGCGAGGTGAACAGAATAAGAGAACT
CCCACAGAACAGTAAAATAGTAGCCACACACACTGATAGTCCTGATGTCC
TCATTTGGGATGGTGAGGCACAACCTANTCGCCATGCTGTCTTANGAGCT
GCTGATTCTCATCCAGATCTGATATTGACCGGCCATCAAGAATATGCTGA
ATTTGCTCTGGCCATGTGTCCAACTGAACCCTATGTGCTCTCTGGAAGCA
AGGATAAGTCAATGGTTTTATGGAGCATNCAAGAACATGTCTCCGCTTTG
GCAGCAGACCCCAGGTCTGCAAAATCTACAGCTCTTGGCGTGCCAACTCT
AAAATGCTTNCAGAAGTGTGGGAATGGGGATAACCTCTANAGAGCCTTCT
ATGGGGCACGAAGTAATACCTAGGCATGAGACCTGTGGAAAACGTCAGTT
CTGTCATCAGGCACAGAGTTCTGAGTGTAGTGATGATTCTGCCTATCTAT
GGATGCCAGACTGCTCTCTNCACTGTCAGGNTGAGAAGCCATATGCGAAT
NCATGGGGTGATGGAATCCCAGA
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