EY650051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RK1_GRATL (50S ribosomal protein L1, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl1 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.148e-43 Identity = 81/134 (60.45%), Postives = 112/134 (83.58%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 414 +VGG+DLI++IK G ++FDKLIA+PDMM+ +A LGKILGP+GLMP+PKAGTVT N+ I+EFK GK+EY+ D++GI+HIPFGK +F+ +DL IN + +SI+ N+P+G+KG YWKS +I S+MGPSI L+I+ Sbjct: 94 IVGGEDLIDEIKKGRLDFDKLIATPDMMMSIAKLGKILGPKGLMPSPKAGTVTHNLITTIKEFKAGKLEYKIDRSGILHIPFGKLNFNVEDLHINLITLQESIDRNRPQGSKGKYWKSVHINSTMGPSIPLDIQ 227
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_PROM9 (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplA PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.500e-43 Identity = 83/140 (59.29%), Postives = 108/140 (77.14%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 432 L G +DL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVT +I AI+EFK GK+E+RADK GIVH+ FGKA F+++ L N +SI+ NKP G+KG YWKS Y+ S+MGPS++++I + DY+ Sbjct: 93 LFGEEDLVESINKGNMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTNDIANAIKEFKAGKLEFRADKAGIVHVRFGKASFTKEALFDNLKTLQESIDKNKPSGSKGKYWKSFYVTSTMGPSVQVDISAVQDYQ 232
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNE7 (50S ribosomal protein L1 OS=Synechococcus elongatus (strain PCC 7942) GN=rplA PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.558e-43 Identity = 82/141 (58.16%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 + G ++LIE+I GF++FD LIA+PD+M +VA LG+ LGPRGLMP+PK GTVT ++ QAI EFK GK+E+RAD+TGIVH+ FGKA FS DDLL N A ++I+ N+P GAKG YW+S YI ++MGP+I ++I + D KL Sbjct: 94 IAGSEELIEEISKGFLDFDLLIATPDVMPQVAKLGRQLGPRGLMPSPKGGTVTFDLEQAINEFKAGKLEFRADRTGIVHVLFGKASFSADDLLANLKALQETIDRNRPSGAKGRYWRSVYISATMGPAIEVDINALRDLKL 234
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNY3 (50S ribosomal protein L1 OS=Synechocystis sp. (strain PCC 6803) GN=rplA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.342e-43 Identity = 81/144 (56.25%), Postives = 109/144 (75.69%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKLPSN 444 + G ++LIE+I+ G M+FD LIA+PDMM K+A LGK LGPRGLMP+PK GTVT ++ A+ EFK GK+E+RAD+TGIVH+ FGKA FS DDLL N A ++I+ N+P GAKG +W++ ++ SSMGPSI ++I + D K N Sbjct: 95 IAGSEELIEEIQKGMMDFDVLIATPDMMPKIARLGKQLGPRGLMPSPKGGTVTADLAAAVNEFKAGKLEFRADRTGIVHVMFGKASFSADDLLANLKALQETIDRNRPSGAKGRFWRTVFVSSSMGPSIPVDINALRDLKFEDN 238
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_TRIEI (50S ribosomal protein L1 OS=Trichodesmium erythraeum (strain IMS101) GN=rplA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.364e-43 Identity = 79/141 (56.03%), Postives = 111/141 (78.72%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 L G ++LIEQI G MEFD+LIA+PD+M +VA LG++LGPRGLMP+PK GTVT ++ +AI+EFK GK+E+RAD++GIVH+ FGK FS +DLLIN A + I+ N+P GAKG YW++ ++ ++MGPSI +++ + D KL Sbjct: 94 LAGSEELIEQISKGMMEFDRLIATPDVMPQVAKLGRLLGPRGLMPSPKGGTVTFDLTKAIDEFKAGKLEFRADRSGIVHVMFGKTSFSVEDLLINLKALQECIDRNRPSGAKGRYWRTIFVSATMGPSIEIDVSSLQDLKL 234
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNP6 (50S ribosomal protein L1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.700e-43 Identity = 81/141 (57.45%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 + G ++LIE+I GF++FD LIA+PD+M +VA LG+ LGPRGLMP+PK GTVT ++ QA+ EFK GK+E+RAD+TGIVH+ FGKA FS DDLL N A ++I+ N+P GAKG YW+S YI ++MGP+I ++I + D KL Sbjct: 94 IAGSEELIEEISKGFLDFDLLIATPDVMPQVAKLGRQLGPRGLMPSPKGGTVTFDLEQAVNEFKAGKLEFRADRTGIVHVLFGKASFSADDLLANLKALQETIDRNRPSGAKGRYWRSVYISATMGPAIEVDINALRDPKL 234
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNS3 (50S ribosomal protein L1 OS=Synechococcus sp. (strain CC9311) GN=rplA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.444e-43 Identity = 83/138 (60.14%), Postives = 106/138 (76.81%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 L G +DL+E I G M FD LIA+PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI+EFK GK+E+RAD+TGIVH+ FGKA F+ + LL N ++I+ NKP GAKG YWKS Y+ S+MGPS+ ++I + D Sbjct: 93 LSGDEDLVEAISKGEMNFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLASAIQEFKAGKLEFRADRTGIVHVRFGKASFTAEALLENLKTLQETIDRNKPSGAKGRYWKSLYVTSTMGPSVEVDIALLQD 230
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_PROMT (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain NATL2A) GN=rplA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.444e-43 Identity = 83/138 (60.14%), Postives = 106/138 (76.81%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 L G +DL++ I G M FD LI++PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI+EFK GK+E+RADK GIVH+ FGKA FSE+ LL N +IE NKP GAKG +W+S +I S+MGPS+ ++I E+ D Sbjct: 93 LAGEEDLVDSINKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLEGAIKEFKAGKLEFRADKAGIVHVRFGKASFSEEALLENLKTLQTTIEKNKPSGAKGKFWRSFFITSTMGPSVEVDINELQD 230
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_PROM1 (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain NATL1A) GN=rplA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.444e-43 Identity = 83/138 (60.14%), Postives = 106/138 (76.81%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 L G +DL++ I G M FD LI++PDMM KVA LG++LGPRGLMPNPKAGTVTT++ AI+EFK GK+E+RADK GIVH+ FGKA FSE+ LL N +IE NKP GAKG +W+S +I S+MGPS+ ++I E+ D Sbjct: 93 LAGEEDLVDSINKGEMNFDLLISTPDMMPKVAKLGRVLGPRGLMPNPKAGTVTTDLEGAIKEFKAGKLEFRADKAGIVHVRFGKASFSEEALLENLKTLQTTIEKNKPSGAKGKFWRSFFITSTMGPSVEVDINELQD 230
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_CYAP8 (50S ribosomal protein L1 OS=Cyanothece sp. (strain PCC 8801) GN=rplA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.444e-43 Identity = 80/141 (56.74%), Postives = 110/141 (78.01%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYKL 435 +VG ++LIE+I G M+F+ LIA+PDMM KVA LG++LGPRGLMP+PK GTVT ++ AI EFK GK+E+RAD+TGIVH+ FGKA F+ +DLL N A ++++ N+P GAKG YW+S ++ +SMGPSI ++I + D KL Sbjct: 95 IVGSEELIEEIFKGMMDFEVLIATPDMMPKVAKLGRLLGPRGLMPSPKGGTVTADLTNAITEFKAGKLEFRADRTGIVHVMFGKASFTPEDLLANLKALQETVDRNRPSGAKGRYWRSVFVSASMGPSIAVDINALRDLKL 235 The following BLAST results are available for this feature:
BLAST of EY650051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650051 ID=EY650051; Name=EY650051; organism=Citrus sinensis; type=EST; length=762bpback to top |