EY650051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_THETH (50S ribosomal protein L1 OS=Thermus thermophilus GN=rplA PE=1 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 6.749e-36 Identity = 69/132 (52.27%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVAS-LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VGG+++I++I G+M+FD ++A+PD+M V S LG+ILGPRGL+PNPKAGTV NI + I E K G++E+R DKTG +H P GKA F + L N A ++++EA+KP+GAKG + +S Y+ ++MGPS+R+N Sbjct: 95 VGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRIN 226
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_THET8 (50S ribosomal protein L1 OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=rplA PE=1 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 6.749e-36 Identity = 69/132 (52.27%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVAS-LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VGG+++I++I G+M+FD ++A+PD+M V S LG+ILGPRGL+PNPKAGTV NI + I E K G++E+R DKTG +H P GKA F + L N A ++++EA+KP+GAKG + +S Y+ ++MGPS+R+N Sbjct: 95 VGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRIN 226
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_THET2 (50S ribosomal protein L1 OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=rplA PE=1 SV=3) HSP 1 Score: 150.984 bits (380), Expect = 6.749e-36 Identity = 69/132 (52.27%), Postives = 101/132 (76.52%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVAS-LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VGG+++I++I G+M+FD ++A+PD+M V S LG+ILGPRGL+PNPKAGTV NI + I E K G++E+R DKTG +H P GKA F + L N A ++++EA+KP+GAKG + +S Y+ ++MGPS+R+N Sbjct: 95 VGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRIN 226
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_MOOTA (50S ribosomal protein L1 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.151e-35 Identity = 72/131 (54.96%), Postives = 95/131 (72.52%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VG +DL+E+I+GG+++FD IA+PDMM V LG+ILGPRGLMPNPKAGTVT +I +A++E K GK+E+R DKT I+H P GKA F L NF A + ++ KP AKG Y KS + ++MGP IR+N Sbjct: 95 VGAEDLVEKIQGGWLDFDVAIATPDMMGLVGRLGRILGPRGLMPNPKAGTVTMDIARAVKEVKAGKIEFRVDKTAIIHAPIGKASFEASKLKENFQALMDALLRAKPATAKGQYLKSVSLATTMGPGIRVN 225
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_DESMR (50S ribosomal protein L1 OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=rplA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.151e-35 Identity = 66/135 (48.89%), Postives = 96/135 (71.11%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 VGGDDLIE++K GF++FD +A+PDMM V +GKILGPRGLMPN K GTV+ +I +A+ E K GKVE++ DK G++H+P GK F + LL NF A + ++ KP AKG Y ++ + ++MGP I+++ + + Sbjct: 95 VGGDDLIEKVKNGFLDFDSAVATPDMMASVGKIGKILGPRGLMPNAKTGTVSFDIGKAVSELKAGKVEFKVDKAGVLHVPLGKRSFGPEKLLDNFRAVIDAVMRLKPSAAKGTYLQAMALATTMGPGIKVDTQSV 229
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_HALOH (50S ribosomal protein L1 OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=rplA PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.964e-35 Identity = 68/138 (49.28%), Postives = 96/138 (69.57%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 +VG DDL E+IKGG+++FD IA+PDMM V LG+ILGP+GLMPNPK GTVT + +A+++ K GK+EYR DK G +H+P GK F DDL+ NF + + +P AKG Y +S + S+MGP I+++ + +D Sbjct: 94 VVGADDLAEKIKGGWLDFDVAIATPDMMSVVGKLGRILGPKGLMPNPKVGTVTFELEKAVKDAKAGKIEYRVDKNGNIHLPIGKVSFPVDDLMENFKTIIDVLLRERPASAKGRYMRSVTVSSTMGPGIKVDPNQAID 231
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_HELPS (50S ribosomal protein L1 OS=Helicobacter pylori (strain Shi470) GN=rplA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.349e-35 Identity = 71/140 (50.71%), Postives = 97/140 (69.29%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 432 +VGGDDL E+IK G ++FD +IA+PDMM V +G+ILGP+GLMPNPK GTVT +I +A+ K G+V +R DK G VH P GKA F E+ + N L VK+I KP AKG Y ++A + +M PS+ L+ +E++D K Sbjct: 95 VVGGDDLAEEIKNGRIDFDMVIATPDMMAVVGKVGRILGPKGLMPNPKTGTVTMDIAKAVSNAKSGQVNFRVDKKGNVHAPIGKASFPEEKIKENMLELVKTINRLKPSSAKGKYIRNATLSLTMSPSVNLDAQELMDIK 234
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_DEIGD (50S ribosomal protein L1 OS=Deinococcus geothermalis (strain DSM 11300) GN=rplA PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.349e-35 Identity = 68/134 (50.75%), Postives = 98/134 (73.13%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVAS-LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 411 +VGG+DLI++I GFM+FD ++A+PDMM ++ L ++LGPRGL+PNPK+GTV ++ + K G++E+R DKTG+VH P GKA F +L N+ A + ++EA KP AKGVY +SAY+ S+MGPSI L + Sbjct: 94 VVGGEDLIDRIANGFMDFDAVVATPDMMAQIGQKLARLLGPRGLLPNPKSGTVGPDVAGMVRGLKAGRIEFRNDKTGVVHAPIGKASFDPSNLSANYRALLSALEAAKPAAAKGVYLRSAYLTSTMGPSIPLTL 227
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SPHWW (50S ribosomal protein L1 OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=rplA PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.374e-35 Identity = 70/136 (51.47%), Postives = 98/136 (72.06%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 +VG +DL+E I+GG ++FD+ IA+PDMM V LGKILGP+GLMPNPK GTVT N+ +A++ K G+VE+R +K GI+H GKA F +DL NF A V +I KP GAKG Y K A + S+MGP +++++ ++ Sbjct: 94 VVGAEDLLETIQGGTVDFDRCIATPDMMGLVGRLGKILGPKGLMPNPKLGTVTMNVAEAVKAAKGGQVEFRVEKAGIIHSGIGKASFPAEDLRANFDAFVDAIVKAKPTGAKGKYLKKAAVSSTMGPGVKIDVADV 229
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_HELPY (50S ribosomal protein L1 OS=Helicobacter pylori GN=rplA PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.374e-35 Identity = 71/140 (50.71%), Postives = 97/140 (69.29%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLDYK 432 +VGGDDL E+IK G ++FD +IA+PDMM V +G+ILGP+GLMPNPK GTVT +I +A+ K G+V +R DK G VH P GKA F E+ + N L VK+I KP AKG Y ++A + +M PS+ L+ +E++D K Sbjct: 95 VVGGDDLAEEIKNGRIDFDMVIATPDMMAVVGKVGRILGPKGLMPNPKTGTVTMDIAKAVSNAKSGQVNFRVDKKGNVHAPIGKASFPEEKIKENMLELVKTINRLKPSSAKGKYIRNAALSLTMSPSVSLDAQELMDIK 234 The following BLAST results are available for this feature:
BLAST of EY650051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650051 ID=EY650051; Name=EY650051; organism=Citrus sinensis; type=EST; length=762bpback to top |