EY650051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_ACIBL (50S ribosomal protein L1 OS=Acidobacteria bacterium (strain Ellin345) GN=rplA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.461e-35 Identity = 69/132 (52.27%), Postives = 93/132 (70.45%), Query Frame = 1 Query: 16 VGGDDLIEQI-KGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VGG+D++E+I K G+ ++D +I++PDMM V LGK+LGPRGLMPNPK GTVTT++ A+ E K GKVE+R DKTG+VH+P GK F D L+ N + S+ KP AKG Y K Y+ S+MGP I ++ Sbjct: 94 VGGEDMVEKIAKEGWTDYDAVISTPDMMRSVGKLGKVLGPRGLMPNPKTGTVTTDVASAVREVKAGKVEFRTDKTGLVHVPVGKISFPPDKLVDNATTLITSVVKAKPSAAKGKYIKGCYLSSTMGPGISID 225
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_PETMO (50S ribosomal protein L1 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rplA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.745e-35 Identity = 70/136 (51.47%), Postives = 97/136 (71.32%), Query Frame = 1 Query: 16 VGGDDLIEQIKG-GFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 VG DDLIE+I G+ +FD IA+PD+M K+ LGK+LGPRGLMP+PKAGTVT ++ QA++EFK GKVE R D+TG +HIP GK F +DDL N ++A + KP+ +KG + + A I S+MGP I +++ + Sbjct: 95 VGSDDLIEKINNEGWTDFDVAIATPDIMRKIGRLGKVLGPRGLMPSPKAGTVTDDVAQAVKEFKAGKVEVRNDRTGNIHIPIGKVSFDKDDLKENLISAFDQLTKMKPENSKGKFIRKAVIASTMGPGINIDLSSL 230
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_DESHY (50S ribosomal protein L1 OS=Desulfitobacterium hafniense (strain Y51) GN=rplA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.745e-35 Identity = 66/131 (50.38%), Postives = 94/131 (71.76%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VG +D+I +I+ G+ FD ++A+PDMM V LG++LGP+GLMPNPK GTVT ++ +A++E K GK+EYRADK GI+H P GK FSE+ L N+ V+++ KP AKG Y +S + S+MGP +R+N Sbjct: 95 VGAEDMIAKIEQGWFGFDVVVATPDMMGMVGKLGRVLGPKGLMPNPKTGTVTFDVAKAVKEIKAGKIEYRADKAGIIHAPIGKVSFSEEQLYQNYKVLVETLVKAKPAAAKGQYIRSVTVSSTMGPGVRIN 225
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_DESHD (50S ribosomal protein L1 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rplA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.745e-35 Identity = 66/131 (50.38%), Postives = 94/131 (71.76%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VG +D+I +I+ G+ FD ++A+PDMM V LG++LGP+GLMPNPK GTVT ++ +A++E K GK+EYRADK GI+H P GK FSE+ L N+ V+++ KP AKG Y +S + S+MGP +R+N Sbjct: 95 VGAEDMIAKIEQGWFGFDVVVATPDMMGMVGKLGRVLGPKGLMPNPKTGTVTFDVAKAVKEIKAGKIEYRADKAGIIHAPIGKVSFSEEQLYQNYKVLVETLVKAKPAAAKGQYIRSVTVSSTMGPGVRIN 225
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_ALKOO (50S ribosomal protein L1 OS=Alkaliphilus oremlandii (strain OhILAs) GN=rplA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.745e-35 Identity = 69/138 (50.00%), Postives = 99/138 (71.74%), Query Frame = 1 Query: 16 VGGDDLIEQIKG-GFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEMLD 426 VGGD+L+ +I+G + EFD ++A+PDMM V LG++LGP+GLMPNPK+GTVT ++ +A+ E K GKVEYR DKT I+H+P GKA F E L+ NF + ++ KP AKG Y KS + S+MGP I++N ++++ Sbjct: 95 VGGDELVAKIQGENWFEFDVVVATPDMMGVVGRLGRVLGPKGLMPNPKSGTVTFDLTKAVNEIKAGKVEYRLDKTNIIHVPLGKASFEETQLVENFRTLLDAVVKAKPAAAKGQYLKSITVTSTMGPGIKINPLKVME 232
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_HELMI (50S ribosomal protein L1 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.273e-34 Identity = 67/131 (51.15%), Postives = 94/131 (71.76%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VG +DL+E+I+GG+++FD +A+PD+M V LG++LGP+GLMPNPK GTVT ++ +AI+E K GK+EYR DKTGI+H P GKA F LL N+ + ++ KP AKG Y KS + S+M P +R+N Sbjct: 95 VGAEDLVEKIQGGWLDFDVAVATPDVMGLVGKLGRLLGPKGLMPNPKTGTVTFDVARAIQEIKAGKIEYRVDKTGIIHAPIGKASFDVQKLLENYQTLLDTLIKAKPAAAKGQYIKSITLSSTMSPGVRVN 225
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_GRABC (50S ribosomal protein L1 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rplA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.273e-34 Identity = 70/136 (51.47%), Postives = 94/136 (69.12%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 +VG +DL E ++ G +EFD+ IA+PDMM V LGKILGPRGLMPNPK GTVT ++ A+ K G++E+RA+K GI+H GKA F D L+ N A V +I+ KP GAKG Y + A + SSMGP +RL++ + Sbjct: 93 VVGAEDLAELVQNGTIEFDRCIATPDMMALVGRLGKILGPRGLMPNPKLGTVTMDVKGAVTAAKSGQIEFRAEKAGIIHAGIGKASFDADKLVENIRALVDAIQKAKPTGAKGTYLQKAALSSSMGPGMRLDVSSL 228
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_BREBN (50S ribosomal protein L1 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.273e-34 Identity = 65/133 (48.87%), Postives = 94/133 (70.68%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 414 VG D+I +I+GG+ +FD ++A+PDMM +V LG++LGP+GLMPNPK GTVT ++ +A+ E K GK+EYR DK G +H P GKA F D L+ N A +++ KP AKGVY ++ + S+MGP +R+ +K Sbjct: 95 VGDADMIAKIQGGWFDFDVVVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKIEYRVDKAGNIHAPIGKASFDADKLVENLAALTEALNRAKPAAAKGVYMRNVTLSSTMGPGVRVAVK 227
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNWW (50S ribosomal protein L1 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rplA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.662e-34 Identity = 67/131 (51.15%), Postives = 92/131 (70.23%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VGG+DL E+I+GG+ +FD +A+PDMM V +GKILGPRGLMPNPKAGTVT +I + I+E K G++EYR DK+ IVH P G+ F D L N A +++ +P AKG Y +S +CS+M P +++N Sbjct: 94 VGGEDLAEKIQGGWFDFDVAVATPDMMAVVGKMGKILGPRGLMPNPKAGTVTFDIERTIKELKAGRIEYRVDKSAIVHAPIGRISFEVDKLQENLNAFAEALLKARPAAAKGQYMRSVTVCSTMSPGVKIN 224
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_DEIDV (50S ribosomal protein L1 OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=rplA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.662e-34 Identity = 69/134 (51.49%), Postives = 97/134 (72.39%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVAS-LGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNI 411 +VG D+LIE+I GGFMEFD ++A+PDMM V L ++LGPRGL+PNPK+GTV ++ + K G++E+R DKTG+VH P GKA F +L N+ A + ++EA KP AKGV+ +SAY+ ++MGPSI L + Sbjct: 94 VVGSDELIERIAGGFMEFDAVVATPDMMAAVGQKLARLLGPRGLLPNPKSGTVGPDVTGMVRGLKAGRIEFRNDKTGVVHAPIGKASFDPSNLSANYGALISALEAAKPGTAKGVFLRSAYMTTTMGPSIPLTL 227 The following BLAST results are available for this feature:
BLAST of EY650051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650051 ID=EY650051; Name=EY650051; organism=Citrus sinensis; type=EST; length=762bpback to top |