EY650051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_PELPD (50S ribosomal protein L1 OS=Pelobacter propionicus (strain DSM 2379) GN=rplA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34 Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 VG +DL+ +I+ G+ EFD IA+PDMM V +GK+LGPRGLMPNPK GTVT + +A++E K GKVE+R +K GIVH P GK F D L N LA V+++ KP AKG+Y K + S+MGP I L+I ++ Sbjct: 95 VGAEDLVSKIQEGWFEFDTAIATPDMMGVVGKIGKLLGPRGLMPNPKVGTVTFEVSRAVKESKAGKVEFRVEKAGIVHAPVGKVSFDADSLKGNLLALVEALVKAKPSAAKGIYIKKISMSSTMGPGINLDIADV 229
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_GEOSF (50S ribosomal protein L1 OS=Geobacter sp. (strain FRC-32) GN=rplA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34 Identity = 67/135 (49.63%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 VG DDL+ +I+ G+ EFD IA+PDMM V +GK+LGPRGLMPNPK GTVT ++ +A+ E K GKVE+R +K GI+H P GK F D L N LA + ++ +KP AKG Y K + S+MGP + L++ ++ Sbjct: 94 VGADDLVAKIQEGWFEFDTAIATPDMMGVVGKIGKLLGPRGLMPNPKVGTVTFDVGRAVNESKSGKVEFRVEKAGIIHAPVGKVSFETDKLKENILALIDALVKSKPSAAKGTYIKKISVSSTMGPGVNLDVSDV 228
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_DEHSC (50S ribosomal protein L1 OS=Dehalococcoides sp. (strain CBDB1) GN=rplA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34 Identity = 71/134 (52.99%), Postives = 99/134 (73.88%), Query Frame = 1 Query: 19 GGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT--NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 414 GGD+LI++I+ GF++FD I++PDMM KV LGK+LG RGLMPNPK+GTV + + IEE +KG+VE++ D++GIVHI GKA F LL N + V +I +KP GAKG Y KSAY+ ++MGP +RL+++ Sbjct: 96 GGDELIKKIEAGFLDFDVAISTPDMMSKVGKLGKVLGRRGLMPNPKSGTVVPAEDFKKVIEEARKGRVEFKLDRSGIVHIILGKASFEGQMLLENMTSVVDAIIRSKPTGAKGQYIKSAYLATTMGPGVRLDLR 229
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_DEHSB (50S ribosomal protein L1 OS=Dehalococcoides sp. (strain BAV1) GN=rplA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.171e-34 Identity = 71/134 (52.99%), Postives = 99/134 (73.88%), Query Frame = 1 Query: 19 GGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT--NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 414 GGD+LI++I+ GF++FD I++PDMM KV LGK+LG RGLMPNPK+GTV + + IEE +KG+VE++ D++GIVHI GKA F LL N + V +I +KP GAKG Y KSAY+ ++MGP +RL+++ Sbjct: 96 GGDELIKKIEAGFLDFDVAISTPDMMSKVGKLGKVLGRRGLMPNPKSGTVVPAEDFKKVIEEARKGRVEFKLDRSGIVHIILGKASFEGQMLLENMTSVVDAIIRSKPTGAKGQYIKSAYLATTMGPGVRLDLR 229
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_PARL1 (50S ribosomal protein L1 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.835e-34 Identity = 67/131 (51.15%), Postives = 93/131 (70.99%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRL 405 +VG DDL E ++ G ++FD+ IA+PDMM V LGK+LGPRGLMPNPK GTVT ++ +A++ K G VE+R +K GI+H GKA FSED +L+N A + +++ KP GAKG Y K I S+MGP +++ Sbjct: 94 IVGDDDLAEIVQSGKIDFDRCIATPDMMPLVGRLGKVLGPRGLMPNPKVGTVTPDVAEAVKAAKGGAVEFRVEKAGIIHAGVGKASFSEDQILVNIRALIDAVQKAKPTGAKGTYIKRIAISSTMGPGVKV 224
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_DEHE1 (50S ribosomal protein L1 OS=Dehalococcoides ethenogenes (strain 195) GN=rplA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.835e-34 Identity = 69/134 (51.49%), Postives = 99/134 (73.88%), Query Frame = 1 Query: 19 GGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTT--NIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIK 414 GGD+LI++++ GF++FD I++PDMM KV LGK+LG RGLMPNPK+GTV + Q IEE +KG+VE++ D++GIVHI GKA F LL N + V +I +KP GAKG Y KSAY+ ++MGP ++++++ Sbjct: 96 GGDELIKKVEAGFLDFDVAISTPDMMSKVGKLGKVLGRRGLMPNPKSGTVVPAEDFKQVIEEARKGRVEFKLDRSGIVHIILGKASFEGQALLENMTSVVDAIIRSKPTGAKGQYIKSAYLATTMGPGVKMDLR 229
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_HYPNA (50S ribosomal protein L1 OS=Hyphomonas neptunium (strain ATCC 15444) GN=rplA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.703e-34 Identity = 66/135 (48.89%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 13 LVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKE 417 +VG DDL E++ GGFM+FD++IA+PDMM V LGK+LGPRGLMPNPK GTVT N+ QA+++ K G VE++ +K GIVH GKA FS+ D+ N A + ++ +P GAKG + + + S+MG + +++ E Sbjct: 94 IVGADDLFEKVNGGFMDFDRVIATPDMMGLVGRLGKVLGPRGLMPNPKVGTVTPNVAQAVKDAKGGAVEFKVEKAGIVHAGVGKASFSDADIEKNVQAFISAVVKARPSGAKGTFVRKVTLSSTMGTGVAIDLAE 228
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_GEOUR (50S ribosomal protein L1 OS=Geobacter uraniireducens (strain Rf4) GN=rplA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.703e-34 Identity = 67/135 (49.63%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLNIKEM 420 VG DDL+ +I+ G+ +FD IA+PDMM V +GK+LGPRGLMPNPK GTVT ++ +A+ E K GKVE+R +K GI+H P GK F D L N LA V ++ +KP AKG Y K + S+MGP + L++ ++ Sbjct: 94 VGADDLVAKIQEGWFDFDTAIATPDMMGVVGKIGKLLGPRGLMPNPKVGTVTFDVGRAVNESKSGKVEFRVEKAGIIHAPVGKVSFDADKLKENILALVDALVKSKPSAAKGTYIKKISVSSTMGPGVNLDVSDV 228
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_DESAA (50S ribosomal protein L1 OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rplA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.703e-34 Identity = 63/131 (48.09%), Postives = 95/131 (72.52%), Query Frame = 1 Query: 16 VGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 VG DDL+E+I+GG+++FDK IA+PDMM V +G+ILGPRGLMPN K GTVT ++ +A++E K GK+++R ++ GI+H P GK F + LL N A ++++ KP AKG Y KS + ++MGP ++++ Sbjct: 95 VGNDDLVEKIQGGWLDFDKAIATPDMMGTVGKMGRILGPRGLMPNAKTGTVTFDVAKAVQELKAGKIDFRVERAGILHAPMGKVSFGAEKLLDNISAFFETVQRLKPSAAKGTYMKSIAVSTTMGPGVKID 225
BLAST of EY650051 vs. ExPASy Swiss-Prot
Match: RL1_SYNAS (50S ribosomal protein L1 OS=Syntrophus aciditrophicus (strain SB) GN=rplA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.836e-34 Identity = 69/130 (53.08%), Postives = 91/130 (70.00%), Query Frame = 1 Query: 19 GGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKAGTVTTNIPQAIEEFKKGKVEYRADKTGIVHIPFGKADFSEDDLLINFLAAVKSIEANKPKGAKGVYWKSAYICSSMGPSIRLN 408 G D+ IE+IK G++EFD++IA+PDMM V LGKILGPRGLMPNPK GTVT ++ A++E K GKVE+R +K GIVH P GK F D L+ N A ++ I KP +KG Y K + S+MGP +R++ Sbjct: 96 GSDEFIEKIKSGWLEFDRVIATPDMMGNVGKLGKILGPRGLMPNPKVGTVTFDVATAVKEVKAGKVEFRVEKAGIVHSPVGKVSFGPDRLMENIQALIEMIIKLKPATSKGTYIKGIALSSTMGPGVRVD 225 The following BLAST results are available for this feature:
BLAST of EY650051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY650051 ID=EY650051; Name=EY650051; organism=Citrus sinensis; type=EST; length=762bpback to top |