EY650013

Overview
NameEY650013
Unique NameEY650013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length936
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650013 vs. ExPASy Swiss-Prot
Match: VILI_BOVIN (Villin-1 OS=Bos taurus GN=VIL1 PE=2 SV=3)

HSP 1 Score: 55.4546 bits (132), Expect = 1.904e-17
Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  560 DEXGTAAIKTVELDACLGGRAVQHRELQGRGSDKFLGYLKRWVIHWGGG 706
            DE G AAI T ++D  L GRAVQHRE+QG  SD F GY K+ ++   GG
Sbjct:   73 DEQGAAAIYTTQMDDFLKGRAVQHREVQGNESDTFRGYFKKGIVIRKGG 121          

HSP 2 Score: 52.7582 bits (125), Expect = 1.904e-17
Identity = 23/52 (44.23%), Postives = 32/52 (61.54%), Query Frame = 1
Query:  394 GTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLETTPGKGGAYLDDIHFWMGK 549
            G +IWRIE  Q VP+P +  G F+ GDCY V++     G     DIH+W+G+
Sbjct:   18 GVQIWRIEAMQMVPVPSNSFGSFFDGDCY-VIQAIHKTGSNLSYDIHYWIGQ 68          
BLAST of EY650013 vs. ExPASy Swiss-Prot
Match: VILI1_ARATH (Villin-1 OS=Arabidopsis thaliana GN=VLN1 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 3.211e-17
Identity = 31/70 (44.29%), Postives = 44/70 (62.86%), Query Frame = 1
Query:  337 MATSAKSLDPAFQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLETTPGKGGAYLDDIHFWMG 546
            M+  +K +D AFQG G + G EIW + N Q + +PKS  GKF+ G+ Y+VL T   K  +   DIH+W+G
Sbjct:    1 MSRLSKDIDSAFQGVGTKSGLEIWCVYNKQLISIPKSSFGKFHSGNAYLVLRTFLRKIESPQYDIHYWLG 70          

HSP 2 Score: 40.817 bits (94), Expect = 3.211e-17
Identity = 23/54 (42.59%), Postives = 34/54 (62.96%), Query Frame = 2
Query:  530 YISGWEKNK*DEXGTAAIKTVELDACLGGRAVQHRELQGRGSDKFLGYLKRWVI 691
            Y  G + N+ D    A+ K ++LDA LG   VQ+RE+QG+ ++KFL Y K  +I
Sbjct:   67 YWLGIDANEVDSI-LASDKALDLDAALGCCTVQYREVQGQETEKFLSYFKPCII 119          
BLAST of EY650013 vs. ExPASy Swiss-Prot
Match: VILI_HUMAN (Villin-1 OS=Homo sapiens GN=VIL1 PE=1 SV=4)

HSP 1 Score: 53.9138 bits (128), Expect = 5.436e-17
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 1
Query:  394 GTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLETTPGKGGAYLDDIHFWMGKE 552
            G +IWRIE  Q VP+P S  G F+ GDCYI+L        +   DIH+W+G++
Sbjct:   18 GLQIWRIEAMQMVPVPSSTFGSFFDGDCYIIL-AIHKTASSLSYDIHYWIGQD 69          

HSP 2 Score: 52.7582 bits (125), Expect = 5.436e-17
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 2
Query:  560 DEXGTAAIKTVELDACLGGRAVQHRELQGRGSDKFLGYLKRWVIHWGGG 706
            DE G AAI T ++D  L GRAVQHRE+QG  S+ F GY K+ ++   GG
Sbjct:   73 DEQGAAAIYTTQMDDFLKGRAVQHREVQGNESEAFRGYFKQGLVIRKGG 121          
BLAST of EY650013 vs. ExPASy Swiss-Prot
Match: VILI_MOUSE (Villin-1 OS=Mus musculus GN=Vil1 PE=2 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 2.621e-16
Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 1
Query:  394 GTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLETTPGKGGAYLD-DIHFWMGKE 552
            G +IWRIE  Q VP+P S  G F+ GDCY+VL     K  + L  DIH+W+G++
Sbjct:   18 GIQIWRIEAMQMVPVPSSTFGSFFDGDCYVVLAI--HKTSSTLSYDIHYWIGQD 69          

HSP 2 Score: 50.447 bits (119), Expect = 2.621e-16
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 2
Query:  560 DEXGTAAIKTVELDACLGGRAVQHRELQGRGSDKFLGYLKRWVIHWGGG 706
            DE G AAI T ++D  L GRAVQHRE+QG  S+ F  Y K+ ++   GG
Sbjct:   73 DEQGAAAIYTTQMDDYLKGRAVQHREVQGNESETFRSYFKQGLVIRKGG 121          
BLAST of EY650013 vs. ExPASy Swiss-Prot
Match: CAPG_MOUSE (Macrophage-capping protein OS=Mus musculus GN=Capg PE=1 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 2.825e-15
Identity = 22/61 (36.07%), Postives = 34/61 (55.74%), Query Frame = 1
Query:  370 FQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLETTPGKGGAYLDDIHFWMGKE 552
            F  + Q  G  IWR+E  +PVP+ +  HG F+ GD Y+VL   P +       +H W+G++
Sbjct:   12 FPASVQDPGLHIWRVEKLKPVPIARESHGIFFSGDSYLVLHNGPEEA----SHLHLWIGQQ 68          

HSP 2 Score: 48.1358 bits (113), Expect = 2.825e-15
Identity = 23/50 (46.00%), Postives = 30/50 (60.00%), Query Frame = 2
Query:  560 DEXGTAAIKTVELDACLGGRAVQHRELQGRGSDKFLGYLKRWVIHWGGGG 709
            DE G  A+  V L+  LG R VQHRE+QG  SD F+ Y  R + ++  GG
Sbjct:   72 DEQGACAVLAVHLNTLLGERPVQHREVQGNESDLFMSYFPRGLKYYREGG 121          
BLAST of EY650013 vs. ExPASy Swiss-Prot
Match: CAPG_HUMAN (Macrophage-capping protein OS=Homo sapiens GN=CAPG PE=1 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 6.203e-15
Identity = 23/72 (31.94%), Postives = 38/72 (52.78%), Query Frame = 1
Query:  337 MATSAKSLDPAFQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLETTPGKGGAYLDDIHFWMGKE 552
            M T+       F G+ Q  G  +WR+E  +PVP+ +   G F+ GD Y+VL   P +    +  +H W+G++
Sbjct:    1 MYTAIPQSGSPFPGSVQDPGLHVWRVEKLKPVPVAQENQGVFFSGDSYLVLHNGPEE----VSHLHLWIGQQ 68          

HSP 2 Score: 47.3654 bits (111), Expect = 6.203e-15
Identity = 23/49 (46.94%), Postives = 29/49 (59.18%), Query Frame = 2
Query:  560 DEXGTAAIKTVELDACLGGRAVQHRELQGRGSDKFLGYLKRWVIHWGGG 706
            DE G  A+  V L+  LG R VQHRE+QG  SD F+ Y  R + +  GG
Sbjct:   72 DEQGACAVLAVHLNTLLGERPVQHREVQGNESDLFMSYFPRGLKYQEGG 120          
BLAST of EY650013 vs. ExPASy Swiss-Prot
Match: SEVE_ECHGR (Severin OS=Echinococcus granulosus GN=AG8 PE=2 SV=3)

HSP 1 Score: 51.6026 bits (122), Expect = 8.045e-15
Identity = 21/50 (42.00%), Postives = 30/50 (60.00%), Query Frame = 1
Query:  403 IWRIENFQPVPLPKSEHGKFYMGDCYIVLETTPGKGG-AYLDDIHFWMGK 549
            +WR+  F   P+P  E G FY GD Y++ + T   GG   L ++HFW+GK
Sbjct:   52 VWRVNQFTLEPVPSDEIGNFYNGDSYVICKATRSPGGDKLLYNVHFWIGK 101          

HSP 2 Score: 47.7506 bits (112), Expect = 8.045e-15
Identity = 25/44 (56.82%), Postives = 28/44 (63.64%), Query Frame = 2
Query:  560 DEXGTAAIKTVELDACLGGRAVQHRELQGRGSDKFLGYLKRWVI 691
            DE GTAA KTVELD  L   AVQHRE++G  S  F  Y  + VI
Sbjct:  106 DEYGTAAYKTVELDTFLDDAAVQHREVEGYESQLFKSYFDKLVI 149          
BLAST of EY650013 vs. ExPASy Swiss-Prot
Match: CAPG_RAT (Macrophage-capping protein OS=Rattus norvegicus GN=Capg PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 1.768e-14
Identity = 22/61 (36.07%), Postives = 34/61 (55.74%), Query Frame = 1
Query:  370 FQGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLETTPGKGGAYLDDIHFWMGKE 552
            F  + Q  G  IWR+E  +PVP+ +  HG F+ GD Y+VL   P +       +H W+G++
Sbjct:   12 FPASVQDPGLHIWRVEKLKPVPIARENHGIFFSGDSYLVLHNGPEEA----SHLHLWIGQQ 68          

HSP 2 Score: 45.4394 bits (106), Expect = 1.768e-14
Identity = 22/49 (44.90%), Postives = 29/49 (59.18%), Query Frame = 2
Query:  560 DEXGTAAIKTVELDACLGGRAVQHRELQGRGSDKFLGYLKRWVIHWGGG 706
            DE G  A+  V L+  LG R VQHRE+QG  SD F+ Y  + + +  GG
Sbjct:   72 DEQGACAVLAVHLNTLLGERPVQHREVQGNESDLFMSYFPQGLKYREGG 120          
BLAST of EY650013 vs. ExPASy Swiss-Prot
Match: GELS_HALRO (Gelsolin, cytoplasmic OS=Halocynthia roretzi PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.104e-12
Identity = 32/61 (52.46%), Postives = 45/61 (73.77%), Query Frame = 1
Query:  373 QGAGQRVGTEIWRIENFQPVPLPKSEHGKFYMGDCYIVLETTPGKGGAYLD-DIHFWMGKE 552
            Q AG+  G +IWRIE+F+ VP+PK+ HGKFY GD YI+L+TT  + G   + ++H+W GKE
Sbjct:    8 QKAGKETGIQIWRIEDFELVPVPKTNHGKFYTGDSYIILKTTALESGRGFEWNLHYWQGKE 68          
The following BLAST results are available for this feature:
BLAST of EY650013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
VILI_BOVIN1.904e-1755.10Villin-1 OS=Bos taurus GN=VIL1 PE=2 SV=3[more]
VILI1_ARATH3.211e-1744.29Villin-1 OS=Arabidopsis thaliana GN=VLN1 PE=2 SV=2[more]
VILI_HUMAN5.436e-1745.28Villin-1 OS=Homo sapiens GN=VIL1 PE=1 SV=4[more]
VILI_MOUSE2.621e-1648.15Villin-1 OS=Mus musculus GN=Vil1 PE=2 SV=2[more]
CAPG_MOUSE2.825e-1536.07Macrophage-capping protein OS=Mus musculus GN=Capg... [more]
CAPG_HUMAN6.203e-1531.94Macrophage-capping protein OS=Homo sapiens GN=CAPG... [more]
SEVE_ECHGR8.045e-1542.00Severin OS=Echinococcus granulosus GN=AG8 PE=2 SV=... [more]
CAPG_RAT1.768e-1436.07Macrophage-capping protein OS=Rattus norvegicus GN... [more]
GELS_HALRO1.104e-1252.46Gelsolin, cytoplasmic OS=Halocynthia roretzi PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-C02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650013 ID=EY650013; Name=EY650013; organism=Citrus sinensis; type=EST; length=936bp
TTCATTTTTCTCTCTCTATCTCTTTCGGGAGGGCGGGGGGCTGAAAAGAC
CCCCAACGAATTAAAAAAAAAAAAAAGTTAGAGAGAGAGCCCAGAACCCA
CAGCACACACACAACACAACCTCCTCAATTATTCACTTTTCTTTCTCTTT
TCCCCAGTATCTTTTATTTGCCAGCTTTTCCTTTTTTCGGAGTGCATCAT
CACTCTTCACACACACACACATTGAGATCCCTCTCTCTGGGTCTTTAAGT
GAATATTACAGTTTCGAGGTAGCAAAATCATCGAGTCTTTATTCTGTTTG
TGATTATAATAACAGTAATAAAGAAGGATTTTGAGGATGGCTACCTCTGC
AAAATCTTTGGATCCTGCATTTCAAGGAGCGGGTCAGAGAGTTGGTACTG
AAATTTGGCGAATTGAGAATTTTCAACCGGTTCCATTGCCTAAGTCTGAA
CATGGAAAATTCTATATGGGGGATTGCTACATCGTCTTGGAGACAACACC
TGGCAAGGGAGGGGCTTATCTGGATGACATACATTTCTGGATGGGAAAAG
AACAAGTAGGATGAANCTGGAACAGCAGCTATTAAAACTGTGGAACTTGA
TGCCTGTCTTGGAGGGCGGGCAGTTCAACACCGGGAACTTCAAGGGCGTG
GATCTGACAAATTTTTGGGCTATTTGAAGCGCTGGGTTATACACTGGGGG
GGGGGGGGGTGACTCGCGGGTGTAGAAAAACGGAGGGACAGAAATCGAAA
GAGGGGTGGCTCTCTGCAGGGGAAACGAGTCTGCAAAAAAAGCGAGGGCC
TTGTCGGTGGTCTGCACTGATCAAGAGGGAGGGGTGTTTCGGGGACCTAG
GGAGGGGTCTTGCGTTGAGGGGCGCAATGTCATGGCGGGAAGGGGCGGGG
CGGAGGAGGATGACCGTTCGGGGAGAAGCCCGGCGG
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