EY650002 | Citrus Genome Database

Overview


Name	EY650002
Unique Name	EY650002
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	924

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN19_ARATH (Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11050 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 3.969e-43
Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = 1

Query:  250 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 522
            LSKS+L+FEAQRSG LP NQRV+WR HSGL DG   GVDLVGGYYDAGD+VKFGLPMAFTVT + W +IE+  Q+ + GEL HA +A+KWG
Sbjct:   31 LSKSILFFEAQRSGHLPPNQRVSWRSHSGLYDGKSSGVDLVGGYYDAGDNVKFGLPMAFTVTTMCWSIIEYGGQLESNGELGHAIDAVKWG 121

HSP 2 Score: 56.225 bits (134), Expect = 3.969e-43
Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = 2

Query:  521 GAGLLIKAHTIPNVLWAEGGDGDTDHYCWDRPEDMT 628
            G    IKAH  PNVL+ E GDG +DHYCW RPE+MT
Sbjct:  121 GTDYFIKAHPEPNVLYGEVGDGKSDHYCWQRPEEMT 156

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN5_ARATH (Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g48930 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.560e-40
Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = 1

Query:  250 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 522
            L K+ L+FEAQRSG+LP  QRV WR  SGL DGL QGV L GGYYDAGDHVKFGLPMAF VTMLSW  ++ R++++++ +++    +I+WG
Sbjct:   35 LDKTFLFFEAQRSGKLPAAQRVKWRGPSGLKDGLAQGVSLEGGYYDAGDHVKFGLPMAFAVTMLSWAAVDNRKELSSSNQMQQTLWSIRWG 125

HSP 2 Score: 62.003 bits (149), Expect = 6.560e-40
Identity = 24/36 (66.67%), Postives = 28/36 (77.78%), Query Frame = 2

Query:  521 GAGLLIKAHTIPNVLWAEGGDGDTDHYCWDRPEDMT 628
            G    IKAH  PNVLW + GDG++DHYCW+RPEDMT
Sbjct:  125 GTDYFIKAHPQPNVLWGQVGDGESDHYCWERPEDMT 160

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSJ (Endoglucanase 13 OS=Oryza sativa subsp. japonica GN=GLU6 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.569e-38
Identity = 57/89 (64.04%), Postives = 70/89 (78.65%), Query Frame = 1

Query:  256 KSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 522
            K LL+FEAQRSG+LP ++ V WR  S LTDG  QGVDLVGGYYD+GDHVKFGLPMA+ VTMLSWGV+EF +++    +L    +AI+WG
Sbjct:   45 KCLLFFEAQRSGKLPDDRLVRWRGDSALTDGFSQGVDLVGGYYDSGDHVKFGLPMAYAVTMLSWGVVEFEKEMVDGNKLHRVLDAIRWG 133

HSP 2 Score: 53.1434 bits (126), Expect = 1.569e-38
Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 2

Query:  521 GAGLLIKAHTIPNVLWAEGGDGDTDHYCWDRPEDMT 628
            G    +KAHT  N LW + GDGD+DH CW+R EDM+
Sbjct:  133 GTNYFVKAHTQHNALWVQVGDGDSDHLCWERAEDMS 168

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSI (Endoglucanase 13 OS=Oryza sativa subsp. indica GN=GLU6 PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.569e-38
Identity = 57/89 (64.04%), Postives = 70/89 (78.65%), Query Frame = 1

Query:  256 KSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 522
            K LL+FEAQRSG+LP ++ V WR  S LTDG  QGVDLVGGYYD+GDHVKFGLPMA+ VTMLSWGV+EF +++    +L    +AI+WG
Sbjct:   45 KCLLFFEAQRSGKLPDDRLVRWRGDSALTDGFSQGVDLVGGYYDSGDHVKFGLPMAYAVTMLSWGVVEFEKEMVDGNKLHRVLDAIRWG 133

HSP 2 Score: 53.1434 bits (126), Expect = 1.569e-38
Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 2

Query:  521 GAGLLIKAHTIPNVLWAEGGDGDTDHYCWDRPEDMT 628
            G    +KAHT  N LW + GDGD+DH CW+R EDM+
Sbjct:  133 GTNYFVKAHTQHNALWVQVGDGDSDHLCWERAEDMS 168

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN20_ORYSJ (Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.001e-37
Identity = 58/91 (63.74%), Postives = 71/91 (78.02%), Query Frame = 1

Query:  250 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 522
            L+K++L+FE QRSGRLP NQR TWR  S LTDG E+ V+L GGYYDAGD+VKFG PMAFTVT+L W  +E+   +AAAGEL +   AI+WG
Sbjct:   45 LAKAILFFEGQRSGRLPANQRATWRGDSALTDGREENVNLTGGYYDAGDNVKFGYPMAFTVTLLGWSAVEYGAAVAAAGELGNLRAAIRWG 135

HSP 2 Score: 51.2174 bits (121), Expect = 1.001e-37
Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 2

Query:  521 GAGLLIKAHTIPNVLWAEGGDGDTDHYCWDRPEDM 625
            GA  L++AH  P  L+ + GDG+ DH CW+RPEDM
Sbjct:  135 GADFLLRAHASPTTLYTQVGDGNADHQCWERPEDM 169

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN14_ARATH (Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44560 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 8.975e-36
Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 1

Query:  250 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKW 519
            L+KSLLYFEAQRSG+LP NQRVTWR  S L DG +  VDL GGYYDAGD++KFG P+AF  TML+W  IE   Q+ A  E E+A  A+KW
Sbjct:   38 LTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGSDAHVDLTGGYYDAGDNMKFGFPLAFFTTMLAWSNIEMATQLKAHQEQENALAALKW 127

HSP 2 Score: 52.7582 bits (125), Expect = 8.975e-36
Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 2

Query:  533 LIKAHTIPNVLWAEGGDGDTDHYCWDRPEDMT 628
            LIKAH  PNVL+ + GDG++DH CW RPEDMT
Sbjct:  132 LIKAHPEPNVLYGQVGDGNSDHECWMRPEDMT 163

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN13_ARATH (Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44550 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.262e-34
Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 1

Query:  250 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKW 519
            L  SLLYFEAQRSG+LP NQRVTWR  S L DG +  +DL GGYYDAGD++KFG P+AFT TML+W  IE   Q+ A  E  +A  A+KW
Sbjct:   38 LKNSLLYFEAQRSGKLPPNQRVTWRGDSALRDGSDAHIDLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMASQLRAHHEKGNALRALKW 127

HSP 2 Score: 51.2174 bits (121), Expect = 1.262e-34
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 2

Query:  533 LIKAHTIPNVLWAEGGDGDTDHYCWDRPEDMT 628
            LIKAH  PNVL+ + G+G++DH CW RPEDMT
Sbjct:  132 LIKAHPQPNVLYGQVGEGNSDHKCWMRPEDMT 163

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN20_ARATH (Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23560 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.632e-34
Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 1

Query:  250 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 522
            L+KS+L+FE QRSG+LP NQRV WR  S L+DG    V+L+GGYYDAGD+VKF  PM+FT T+LSW  IE++ +I++  +L +    IKWG
Sbjct:   28 LNKSILFFEGQRSGKLPTNQRVKWRADSALSDGSLANVNLIGGYYDAGDNVKFVWPMSFTTTLLSWAAIEYQNEISSVNQLGYLRSTIKWG 118

HSP 2 Score: 53.5286 bits (127), Expect = 3.632e-34
Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = 2

Query:  521 GAGLLIKAHTIPNVLWAEGGDGDTDHYCWDRPEDM 625
            G   +++AHT PN+L+ + GDG++DH CW+RPEDM
Sbjct:  118 GTDFILRAHTSPNMLYTQVGDGNSDHSCWERPEDM 152

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN_PHAVU (Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.729e-34
Identity = 49/91 (53.85%), Postives = 71/91 (78.02%), Query Frame = 1

Query:  250 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 522
            L+K++L+FE QRSG+LP +QRV WR+ S L+DG  Q V+L+GGYYDAGD+VKFG PMAF+ ++LSW  +E+  +I++  +L +   AI+WG
Sbjct:   45 LAKAILFFEGQRSGKLPSSQRVKWREDSALSDGKLQNVNLMGGYYDAGDNVKFGWPMAFSTSLLSWAAVEYESEISSVNQLGYLQSAIRWG 135

HSP 2 Score: 51.9878 bits (123), Expect = 4.729e-34
Identity = 19/35 (54.29%), Postives = 26/35 (74.29%), Query Frame = 2

Query:  521 GAGLLIKAHTIPNVLWAEGGDGDTDHYCWDRPEDM 625
            GA  +++AHT P  L+ + GDG+ DH CW+RPEDM
Sbjct:  135 GADFMLRAHTSPTTLYTQVGDGNADHNCWERPEDM 169

[Close]

BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN12_ARATH (Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44540 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.729e-34
Identity = 53/90 (58.89%), Postives = 66/90 (73.33%), Query Frame = 1

Query:  250 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKW 519
            L KSLLYFEAQRSG+LP NQ+VTWR  S L DG +  +DL GGYYDAGD++KFG P+AFT TML+W  IE   ++ A  E  ++  A+KW
Sbjct:   38 LQKSLLYFEAQRSGKLPPNQKVTWRGDSALKDGSDAHIDLTGGYYDAGDNMKFGFPLAFTTTMLAWSNIEMGSELRAHHEQGNSLRALKW 127

HSP 2 Score: 51.2174 bits (121), Expect = 4.729e-34
Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 2

Query:  533 LIKAHTIPNVLWAEGGDGDTDHYCWDRPEDMT 628
            LIKAH  PNVL+ + G+G++DH CW RPEDMT
Sbjct:  132 LIKAHPQPNVLYGQVGEGNSDHKCWMRPEDMT 163

The following BLAST results are available for this feature:

BLAST of EY650002 vs. ExPASy Swiss-Prot

BLAST of EY650002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62


Match Name	E-value	Identity	Description
GUN19_ARATH	3.969e-43	70.33	Endoglucanase 19 OS=Arabidopsis thaliana GN=At4g11...	[more]
GUN5_ARATH	6.560e-40	60.44	Endoglucanase 5 OS=Arabidopsis thaliana GN=At1g489...	[more]
GUN13_ORYSJ	1.569e-38	64.04	Endoglucanase 13 OS=Oryza sativa subsp. japonica G...	[more]
GUN13_ORYSI	1.569e-38	64.04	Endoglucanase 13 OS=Oryza sativa subsp. indica GN=...	[more]
GUN20_ORYSJ	1.001e-37	63.74	Endoglucanase 20 OS=Oryza sativa subsp. japonica G...	[more]
GUN14_ARATH	8.975e-36	63.33	Endoglucanase 14 OS=Arabidopsis thaliana GN=At2g44...	[more]
GUN13_ARATH	1.262e-34	61.11	Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44...	[more]
GUN20_ARATH	3.632e-34	56.04	Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23...	[more]
GUN_PHAVU	4.729e-34	53.85	Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2	[more]
GUN12_ARATH	4.729e-34	58.89	Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-006-B01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY650002 ID=EY650002; Name=EY650002; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGGAAACTTGAAACTTTAGCTTCACTTTCATCACCCCCCTT
CACTCCTAAAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCTCTTTAGGAGA
TGAAGGGACCCCAAATTAAAAATAATAAGAACCCAAGATTTGCTTTTGTA
AAACAACAGCAGCAGCAGCATTGCTTACTAATCTTAATAAGCATTTTCAT
TAATGTCTCCGCTGCTGCAACGGCAACGGCTTTCGATTACGCTGACGCCT
TGTCAAAGAGCCTCCTTTACTTCGAAGCTCAACGTTCCGGCCGCTTGCCC
TACAACCAACGTGTCACGTGGCGGGACCATTCCGGCCTCACCGACGGCTT
GGAGCAAGGGGTTGATTTGGTCGGAGGGTACTATGATGCTGGTGACCATG
TGAAATTTGGCCTGCCAATGGCTTTCACAGTGACTATGCTTTCATGGGGT
GTCATCGAATTTCGTGAACAGATCGCTGCTGCCGGGGAACTAGAGCATGC
TTTCGAGGCAATCAAATGGGGGCGCTGGATTACTTATTAAGGCACACACT
ATCCCAAATGTGCTATGGGCTGAGGGGGGTGATGGGGATACTGACCACTA
CTGCTGGGACCGCCCGGAGGATATGACCCCATAAGACATGCTTACAAGAT
TGTTATAACAATTCCCGGTCGGATCTCGGCGGGAAGACAACTGCGGGGAA
TGCCCCCCGGTTGATTGGGGTCGAGAAAACTACCCAGGTGGCTCACGCCT
GCTCTTGGACCTGGCCCAAAAGTGGTGGGAGTTGGGGATAAATTTAAGGG
GAATATCATAAAGTGGGGGCCGCGGAAAAGTTCTTCCCCTGGGGAGGGGG
GCTGGTTAGTGGTGTGGGGGGAATGTGGCTGTTAAAGTCCCGCATGTATG
GGGGGGGTGGGGGGGAGTGGGGGG