EY650002

Overview
NameEY650002
Unique NameEY650002
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN7_ARATH (Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.851e-22
Identity = 47/92 (51.09%), Postives = 63/92 (68.48%), Query Frame = 1 
Query:  250 LSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVD-LVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 522
            L K+L +F+AQ+SG+LP   +V+WR  SG  DGL   V  LVGGYYD G +VKF  PMAF++TMLSW +IE+  +  A  E +H  + +KWG
Sbjct:  121 LHKALQFFDAQKSGKLPKKNKVSWRGDSGTKDGLPDVVGGLVGGYYDGGSNVKFHFPMAFSMTMLSWSLIEYSHKYKAIDEYDHMRDVLKWG 212

HSP 2 Score: 26.1794 bits (56), Expect = 3.851e-22
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2 
Query:  593 DHYCWDRPEDMT 628
            D YCW +PEDM+
Sbjct:  246 DIYCWQKPEDMS 257
[Close]
BLAST of EY650002 vs. ExPASy Swiss-Prot
Match: GUN6_DICDI (Endoglucanase OS=Dictyostelium discoideum GN=celA PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.526e-20
Identity = 46/121 (38.02%), Postives = 64/121 (52.89%), Query Frame = 1 
Query:  181 ILISIFINVSXXXXXXXXXXXXXLSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGV-------DLVGGYYDAGDHVKFGLPMAFTVTMLSWGVIEFREQIAAAGELEHAFEAIKWG 522
            IL+ IF  +S             L  +L++++  R+GRLP N  + WR +S L D             +L GGY+DAGD VKFGLPMA+++TML W  IE+   IA  G      + IK+G
Sbjct:    8 ILLIIFGLLSTQLINADTDYCSLLENALMFYKMNRAGRLPDND-IPWRGNSALNDASPNSAKDANGDGNLSGGYFDAGDGVKFGLPMAYSMTMLGWSFIEYESNIAQCGLTSLYLDTIKYG 127

HSP 2 Score: 39.2762 bits (90), Expect = 1.526e-20
Identity = 18/36 (50.00%), Postives = 20/36 (55.56%), Query Frame = 2 
Query:  521 GAGLLIKAHTIPNVLWAEGGDGDTDHYCWDRPEDMT 628
            G   LI AHT  N    + GDG+ DH  W  PEDMT
Sbjct:  127 GTDWLIAAHTADNEFAGQVGDGNVDHSWWGPPEDMT 162
The following BLAST results are available for this feature:
BLAST of EY650002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
GUN7_ARATH3.851e-2251.09Endoglucanase 7 OS=Arabidopsis thaliana GN=KOR2 PE... [more]
GUN6_DICDI1.526e-2038.02Endoglucanase OS=Dictyostelium discoideum GN=celA ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-006-B01-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650002 ID=EY650002; Name=EY650002; organism=Citrus sinensis; type=EST; length=924bp
CCACGCGTCCGGAAACTTGAAACTTTAGCTTCACTTTCATCACCCCCCTT
CACTCCTAAAAAGCAAAGCAAAGCAAAGCAAAGCAAAGCTCTTTAGGAGA
TGAAGGGACCCCAAATTAAAAATAATAAGAACCCAAGATTTGCTTTTGTA
AAACAACAGCAGCAGCAGCATTGCTTACTAATCTTAATAAGCATTTTCAT
TAATGTCTCCGCTGCTGCAACGGCAACGGCTTTCGATTACGCTGACGCCT
TGTCAAAGAGCCTCCTTTACTTCGAAGCTCAACGTTCCGGCCGCTTGCCC
TACAACCAACGTGTCACGTGGCGGGACCATTCCGGCCTCACCGACGGCTT
GGAGCAAGGGGTTGATTTGGTCGGAGGGTACTATGATGCTGGTGACCATG
TGAAATTTGGCCTGCCAATGGCTTTCACAGTGACTATGCTTTCATGGGGT
GTCATCGAATTTCGTGAACAGATCGCTGCTGCCGGGGAACTAGAGCATGC
TTTCGAGGCAATCAAATGGGGGCGCTGGATTACTTATTAAGGCACACACT
ATCCCAAATGTGCTATGGGCTGAGGGGGGTGATGGGGATACTGACCACTA
CTGCTGGGACCGCCCGGAGGATATGACCCCATAAGACATGCTTACAAGAT
TGTTATAACAATTCCCGGTCGGATCTCGGCGGGAAGACAACTGCGGGGAA
TGCCCCCCGGTTGATTGGGGTCGAGAAAACTACCCAGGTGGCTCACGCCT
GCTCTTGGACCTGGCCCAAAAGTGGTGGGAGTTGGGGATAAATTTAAGGG
GAATATCATAAAGTGGGGGCCGCGGAAAAGTTCTTCCCCTGGGGAGGGGG
GCTGGTTAGTGGTGTGGGGGGAATGTGGCTGTTAAAGTCCCGCATGTATG
GGGGGGGTGGGGGGGAGTGGGGGG
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