EY649989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_SOYBN (50S ribosomal protein L23, chloroplastic OS=Glycine max GN=rpl23-A PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.438e-24 Identity = 62/93 (66.67%), Postives = 69/93 (74.19%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSIXXSXKKR 522 M+GIKYAVFTDKSIRLLGKNQYTFNVESG T TEIKHWVELFF VK AMNSH+LP KG ++ G T H + L+ PGYSI KK+ Sbjct: 1 MNGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFDVKVIAMNSHRLPVKGRRVRPIMGHTMHYRRMIITLQ-PGYSIPPLRKKK 92
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_CALFG (50S ribosomal protein L23, chloroplastic OS=Calycanthus floridus var. glaucus GN=rpl23-A PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.438e-24 Identity = 62/92 (67.39%), Postives = 68/92 (73.91%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXGTYHALQTYDHLRSPGYSIXXSXKKR 522 MDGIKYAVFT+KSIRLLG NQYT NVESG T TEIKHWVELFFGVK AMNSH+LP KG +MG T H + L+ PGYSI +KR Sbjct: 1 MDGIKYAVFTEKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMG---HTMHYRRMIITLQ-PGYSIPPLIEKR 88
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_NYMAL (50S ribosomal protein L23, chloroplastic OS=Nymphaea alba GN=rpl23-A PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.158e-24 Identity = 61/93 (65.59%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMG-TYXGTYHALQTYDHLRSPGYSIXXSXKKR 522 MDGIKYAVFT+KSIRLLG NQYT NVESG T TEIKHW+ELFFGVK AMNSH+LP KG +MG T H + L+ PGYSI +KR Sbjct: 1 MDGIKYAVFTEKSIRLLGNNQYTSNVESGSTRTEIKHWIELFFGVKVVAMNSHRLPGKGRRMGPIMRHTMHYRRMIITLQ-PGYSIPPLIEKR 92
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_LACSA (50S ribosomal protein L23, chloroplastic OS=Lactuca sativa GN=rpl23-A PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.158e-24 Identity = 62/93 (66.67%), Postives = 68/93 (73.12%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSIXXSXKKR 522 MDGI+YAVFTDKSI+LLGKNQYT NVESG T TEIKHWVELFFGVK AMNSH+L K +MG G T H + L+ PGYSI KKR Sbjct: 1 MDGIRYAVFTDKSIQLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLRGKARRMGPIMGQTMHYRRMIITLQ-PGYSIPPLRKKR 92
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_POPAL (50S ribosomal protein L23, chloroplastic OS=Populus alba GN=rpl23-A PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.264e-24 Identity = 63/93 (67.74%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSIXXSXKKR 522 MDGIKYAV TDKSIRLL KNQYT NVESG T TEIKHWVELFFGVK AMNSH+LP KG +M G T H + L+ PGYSI KKR Sbjct: 1 MDGIKYAVVTDKSIRLLLKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMRPIMGHTMHYRRMIITLQ-PGYSIPPLRKKR 92
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_PIPCE (50S ribosomal protein L23, chloroplastic OS=Piper cenocladum GN=rpl23-A PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.210e-23 Identity = 61/93 (65.59%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSIXXSXKKR 522 MDGIKY VFT+KSIRLLG NQYT NVESG T TEIKHWVELFFGVK AMNSH+L KG +MG G T H + L+ PGYSI +KR Sbjct: 1 MDGIKYIVFTEKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLQGKGRRMGPIIGHTMHYRRMIITLQ-PGYSIPPLIEKR 92
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_LIRTU (50S ribosomal protein L23, chloroplastic OS=Liriodendron tulipifera GN=rpl23-A PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.210e-23 Identity = 61/93 (65.59%), Postives = 67/93 (72.04%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSIXXSXKKR 522 MDGIKY VFT+KSIRLL NQYT NVESG T TEIKHWVELFFGVK AMNSH+LP KG +MG G T H + L+ PGYSI +KR Sbjct: 1 MDGIKYEVFTEKSIRLLENNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGIRMGPIMGHTMHYRRMIITLQ-PGYSILTLIQKR 92
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_GOSHI (50S ribosomal protein L23, chloroplastic OS=Gossypium hirsutum GN=rpl23-A PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.210e-23 Identity = 62/93 (66.67%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSIXXSXKKR 522 MDGIKY V TDKSIRLL KNQYT NVESG T TEIKHWVELFFGVK AMNSH+LP KG +MG G T H + L+ PGYSI KR Sbjct: 1 MDGIKYVVVTDKSIRLLVKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQ-PGYSIPPLRTKR 92
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_GOSBA (50S ribosomal protein L23, chloroplastic OS=Gossypium barbadense GN=rpl23-A PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.210e-23 Identity = 62/93 (66.67%), Postives = 66/93 (70.97%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSIXXSXKKR 522 MDGIKY V TDKSIRLL KNQYT NVESG T TEIKHWVELFFGVK AMNSH+LP KG +MG G T H + L+ PGYSI KR Sbjct: 1 MDGIKYVVVTDKSIRLLVKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQ-PGYSIPPLRTKR 92
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23A_SORBI (50S ribosomal protein L23-A, chloroplastic OS=Sorghum bicolor GN=rpl23-A PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.598e-23 Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 1 Query: 250 DGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG 447 +GIKYAVFT+KS+RLLGKNQYTFNVESG T TEIKHWVELFFGVK A+NSH+LP KG +MG G Sbjct: 3 NGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFFGVKVVAVNSHRLPGKGRRMGPILG 68 The following BLAST results are available for this feature:
BLAST of EY649989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649989 ID=EY649989; Name=EY649989; organism=Citrus sinensis; type=EST; length=856bpback to top |