EY649989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_MORIN (50S ribosomal protein L23, chloroplastic OS=Morus indica GN=rpl23-A PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.024e-22 Identity = 61/92 (66.30%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSIXXSXKK 519 MDGIKY V TDKSIRLL KNQYT NVESG T TEIKHWVELFFGVK AMNSH+LP KG +MG G T H + L+ PGY I KK Sbjct: 1 MDGIKYFVVTDKSIRLLLKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQ-PGYYIPPLIKK 91
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_AMBTC (50S ribosomal protein L23, chloroplastic OS=Amborella trichopoda GN=rpl23-A PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.024e-22 Identity = 58/94 (61.70%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQL--PRKGXKMGTYXGTYHALQTYDHLRSPGYSIXXSXKKR 522 MDGIKYAVFT+KSIRLLG NQYT NVESG T EIKHW+ELFFGVK AMNSH+L P KG +MG G + PGYSI +KR Sbjct: 1 MDGIKYAVFTEKSIRLLGNNQYTSNVESGSTRAEIKHWIELFFGVKVIAMNSHRLPVPGKGRRMGPLMGHRMHYRRMIITLQPGYSIPPLIEKR 94
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_PELHO (50S ribosomal protein L23, chloroplastic OS=Pelargonium hortorum GN=rpl23-A PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.479e-21 Identity = 57/85 (67.06%), Postives = 63/85 (74.12%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXGTYHALQTYDHLRSPGYSI 501 MDGIKYAV TDKS+RL+ KNQYTFNVESG T TEIK WVELFFGVK AMNSH+LP K +MG T H + L+ PGYSI Sbjct: 1 MDGIKYAVVTDKSLRLVSKNQYTFNVESGSTRTEIKSWVELFFGVKVIAMNSHRLPGKRRRMG---HTMHYRRMIITLQ-PGYSI 81
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK232_SPIOL (Putative 50S ribosomal protein L23, chloroplastic OS=Spinacia oleracea GN=rpl23 PE=5 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.172e-18 Identity = 56/93 (60.22%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSIXXSXKKR 522 MDGIKYAVFTDKSI+LLGK QYT NVES T TEIKHWVEL+ MNSH+LP KG +MG G T H + L+S YSI KKR Sbjct: 1 MDGIKYAVFTDKSIQLLGKKQYTSNVESRSTRTEIKHWVELW---NSYEMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQS-SYSIPPLRKKR 89
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_PICAB (50S ribosomal protein L23, chloroplastic OS=Picea abies GN=rpl23 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.702e-15 Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG 447 MD +KY V T+KSIRLL +NQYTFNV+S L T++K W+E FF VK AMNS++LP KG K G+ G Sbjct: 1 MDEVKYPVLTEKSIRLLERNQYTFNVDSQLNKTKMKIWIEHFFDVKVIAMNSYRLPEKGGKGGSMIG 67
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_PINKO (50S ribosomal protein L23, chloroplastic OS=Pinus koraiensis GN=rpl23 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.110e-14 Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGT 438 MD +KY V T+KSIRLL +NQYTFNV+ T+IK+W+E FF VK AMNS++LP KG K G+ Sbjct: 1 MDEVKYPVLTEKSIRLLERNQYTFNVDLQSNKTKIKNWIENFFDVKVIAMNSYRLPEKGGKRGS 64 HSP 2 Score: 20.7866 bits (42), Expect = 1.110e-14 Identity = 9/27 (33.33%), Postives = 14/27 (51.85%), Query Frame = 2 Query: 413 PERVXRWGPXMAHTMHYRRMIIYAHRG 493 PE+ + G + H + +RMII G Sbjct: 56 PEKGGKRGSMIVHPIRCKRMIITLRTG 82
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_PINTH (50S ribosomal protein L23, chloroplastic OS=Pinus thunbergii GN=rpl23 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.341e-14 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG 447 MD +KY V T+KSIRLL +NQYTFNV+S T+IK+W+E FF VK AMNS++LP KG K + G Sbjct: 1 MDEVKYPVLTEKSIRLLERNQYTFNVDSQSNKTKIKNWIENFFDVKVIAMNSYRLPEKGGKRVSMIG 67
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_MARPO (50S ribosomal protein L23, chloroplastic OS=Marchantia polymorpha GN=rpl23 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.654e-14 Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG-TYHALQTYDHLRSPGYSI 501 M+ +KY V T+K+IRLL KNQY+F+V T+IK W+ELFF VK ++NSH+LP+K K+GT G T + L+S GYSI Sbjct: 1 MNQVKYPVLTEKTIRLLEKNQYSFDVNIDSNKTQIKKWIELFFNVKVISVNSHRLPKKKKKIGTTTGYTVRYKRMIIKLQS-GYSI 85
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_PHYPA (50S ribosomal protein L23, chloroplastic OS=Physcomitrella patens GN=rpl23 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.651e-12 Identity = 40/85 (47.06%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXGTYHALQTYDHLRSPGYSI 501 MD IKY V T+K+IRLL KNQYTF+V T +IK W+E FF VK A+NSH P K ++G G + GYSI Sbjct: 1 MDEIKYPVLTEKTIRLLEKNQYTFDVNKKSTKPQIKKWIENFFNVKVKAINSHIPPEKKKRIGPIIGHSVRYKRMIITLKTGYSI 85
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_ANTFO (50S ribosomal protein L23, chloroplastic OS=Anthoceros formosae GN=rpl23 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.651e-12 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG 447 MD +KY V T+K+IRLL +NQY F+V+ + TEIK W++ FF VK AMNSH+ P+K ++G G Sbjct: 1 MDKVKYPVLTEKTIRLLERNQYCFDVDLKASKTEIKQWIQDFFKVKVVAMNSHRPPKKKKRIGPVLG 67 The following BLAST results are available for this feature:
BLAST of EY649989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649989 ID=EY649989; Name=EY649989; organism=Citrus sinensis; type=EST; length=856bpback to top |