EY649989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_STAPU (50S ribosomal protein L23, chloroplastic OS=Staurastrum punctulatum GN=rpl23 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.769e-12 Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG 447 +D IK V K IRLL KNQYTF+V+ T T++K+WVE FFGVK MNSH+ PRK +MG G Sbjct: 2 IDYIKSPVLKFKLIRLLEKNQYTFDVDPKATKTDVKYWVENFFGVKVIGMNSHRPPRKMKRMGPTIG 68
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_SPIMX (50S ribosomal protein L23, chloroplastic OS=Spirogyra maxima GN=rpl23 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11 Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG 447 MD IKY K+IRLL + QYTF+V+ T TE+K W+E FF VK MNSH+ P+K +MG+ G Sbjct: 1 MDKIKYRPIGMKAIRLLERRQYTFDVDVKATKTEVKRWIEGFFSVKVVGMNSHRPPKKKKRMGSVIG 67
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_PSINU (50S ribosomal protein L23, chloroplastic OS=Psilotum nudum GN=rpl23 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.367e-11 Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRK 420 M+ IK + T+K+IRLL KNQYTFNV+S LT T+IK W+E FF VK ++NS + PRK Sbjct: 1 MNEIKNQIITEKTIRLLQKNQYTFNVDSKLTKTKIKDWIERFFDVKVKSINSLRSPRK 58
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK2_CARPA (50S ribosomal protein L2, chloroplastic OS=Carica papaya GN=rpl2-A PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11 Identity = 53/110 (48.18%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 545 MAIHLYQTSTPSTRME--PETVK*NPITK*FDL*QHRCGKSRNARESY-RRHRGGSHKRLY--VNRFRRMKRLYGRSYH-RYDPIE----CYICYPWGMGREIIYSXRAI 844 MAIHLY+TSTPSTR VK NP QHRCGK RNAR RHRGG HKRLY ++ R K +YGR YDP C I Y G R I++ AI Sbjct: 1 MAIHLYKTSTPSTRNRAVDSQVKSNPRNN-LIYGQHRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAI 109
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK2_AETGR (50S ribosomal protein L2, chloroplastic OS=Aethionema grandiflora GN=rpl2-A PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11 Identity = 53/110 (48.18%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 545 MAIHLYQTSTPSTR--MEPETVK*NPITK*FDL*QHRCGKSRNARESY-RRHRGGSHKRLY--VNRFRRMKRLYGRSYH-RYDPIE----CYICYPWGMGREIIYSXRAI 844 MAIHLY+TSTPSTR VK NP QHRCGK RNAR RHRGG HKRLY ++ R K +YGR YDP C I Y G R I++ AI Sbjct: 1 MAIHLYKTSTPSTRNGAVDSQVKSNPRNN-LIYGQHRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAI 109
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK2_AETCO (50S ribosomal protein L2, chloroplastic OS=Aethionema cordifolium GN=rpl2-A PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.091e-11 Identity = 53/110 (48.18%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 545 MAIHLYQTSTPSTR--MEPETVK*NPITK*FDL*QHRCGKSRNARESY-RRHRGGSHKRLY--VNRFRRMKRLYGRSYH-RYDPIE----CYICYPWGMGREIIYSXRAI 844 MAIHLY+TSTPSTR VK NP QHRCGK RNAR RHRGG HKRLY ++ R K +YGR YDP C I Y G R I++ AI Sbjct: 1 MAIHLYKTSTPSTRNGAVDSQVKSNPRNN-LIYGQHRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEKRYILHPRGAI 109
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK2_GOSBA (50S ribosomal protein L2, chloroplastic OS=Gossypium barbadense GN=rpl2-A PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11 Identity = 52/110 (47.27%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 545 MAIHLYQTSTPSTR--MEPETVK*NPITK*FDL*QHRCGKSRNARESY-RRHRGGSHKRLY--VNRFRRMKRLYGRSYH-RYDPIE----CYICYPWGMGREIIYSXRAI 844 MAIHLY+TSTP TR VK NP QHRCGK RNAR RHRGG HKRLY ++ R K +YGR YDP C+I Y G R I++ AI Sbjct: 1 MAIHLYKTSTPGTRNGAVDSQVKSNPRNN-LIYGQHRCGKGRNARGIITARHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICFIHYGDGEKRYILHPRGAI 109
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_HUPLU (50S ribosomal protein L23, chloroplastic OS=Huperzia lucidula GN=rpl23 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.037e-11 Identity = 37/85 (43.53%), Postives = 49/85 (57.65%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXGTYHALQTYDHLRSPGYSI 501 MD +K V T+K+IRLL K QY+F+V+ TE+KHW+E FF V+ AMNSH+ P K G+ + PGYSI Sbjct: 1 MDKVKKPVLTEKTIRLLEKKQYSFDVDLKSNKTEVKHWIEKFFNVEVRAMNSHRPPGKKKYAGSIVTHSVRYKRMIITLKPGYSI 85
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK23_CHAGL (50S ribosomal protein L23, chloroplastic OS=Chaetosphaeridium globosum GN=rpl23 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11 Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 1 Query: 247 MDGIKYAVFTDKSIRLLGKNQYTFNVESGLTXTEIKHWVELFFGVKGXAMNSHQLPRKGXKMGTYXG 447 +D +K + T+KSIRLL KNQYTF V S + TE K W+E+FF VK ++NS + PRK ++G G Sbjct: 2 IDKVKSPLLTEKSIRLLQKNQYTFQVNSDVNKTEFKKWIEIFFKVKVMSINSCRPPRKKKRIGLISG 68
BLAST of EY649989 vs. ExPASy Swiss-Prot
Match: RK2_PHAAN (50S ribosomal protein L2, chloroplastic OS=Phaseolus angularis GN=rpl2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11 Identity = 51/111 (45.95%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 545 MAIHLYQTSTPSTR---MEPETVK*NPITK*FDL*QHRCGKSRNARESYRR-HRGGSHKRLY--VNRFRRMKRLYGRSYH-RYDPIE----CYICYPWGMGREIIYSXRAI 844 MAIHLY+TSTPSTR ++ VK NP QHRCGK RNAR HRGG HKRLY ++ R K +YGR YDP C I Y G + I++ AI Sbjct: 1 MAIHLYKTSTPSTRNGTVDSRQVKSNPRNH-LIYGQHRCGKGRNARGIITAGHRGGGHKRLYRQIDFRRNEKNIYGRIVTIEYDPNRNASICLIHYGDGEKKYILHPRGAI 110 The following BLAST results are available for this feature:
BLAST of EY649989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649989 ID=EY649989; Name=EY649989; organism=Citrus sinensis; type=EST; length=856bpback to top |