EY649897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_META3 (30S ribosomal protein S5P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps5p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.673e-28 Identity = 67/156 (42.95%), Postives = 98/156 (62.82%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 D W P T++G+ V+EG I ++ I + LP+ E +I+D L+ L+++V+ + VQ+ ++G+R RF+A VVG+ +G VG+G+ SKEV AIR AI AKLS+I VR G W G H++P G CGSV V + APRG G+VA V + Sbjct: 11 DAWEPKTQVGKKVKEGTITDIDYIIDNGLPLLEPEIVDALLPD-LEEQVLDVSLVQRMHKSGRRARFRATAVVGNRNGFVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRTGCGSWECGCGTAHSIPFAAKGSCGSVKVELLPAPRGVGLVAGNVAK 165 HSP 2 Score: 27.7202 bits (60), Expect = 1.673e-28 Identity = 14/30 (46.67%), Postives = 18/30 (60.00%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 +K VL AGI D+ T + G T+T NF A Sbjct: 164 AKAVLGLAGIKDIWTKTFGDTRTTYNFAIA 193
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METB6 (30S ribosomal protein S5P OS=Methanoregula boonei (strain 6A8) GN=rps5p PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.344e-27 Identity = 58/156 (37.18%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 185 KWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPRK 646 +W PVT LG+ V G+I+ ++Q+ PIKE +I+D + L+DEV+ I +Q+ T +G+R +F+A V+VG+ +G++G G +V AI+ AI AK++++ VR G W H++P V G GSV V + AP+G G+V + +K Sbjct: 7 EWRPVTGLGKQVASGEIKSIDQVLESGRPIKEPEIVDMFLPD-LEDEVLDIAMMQRMTDSGRRVQFRAVVIVGNRNGYIGFGQGKDVQVGDAIKKAITKAKMNLVKVRRGCGSWECGCAVLHSIPMQVEGTAGSVRVTLKPAPQGIGLVTGDISKK 161 HSP 2 Score: 36.5798 bits (83), Expect = 2.344e-27 Identity = 18/30 (60.00%), Postives = 21/30 (70.00%), Query Frame = 1 Query: 637 SKKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 SKKVL+ AGI D T +RG T+T NF KA Sbjct: 159 SKKVLELAGIKDAWTFARGQTRTTINFAKA 188
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_METST (30S ribosomal protein S5P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps5p PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.481e-26 Identity = 64/154 (41.56%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGY--WGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARV 637 + W P T+LGR V++G+I ++QI LPI E +I+D L+ L++EVM + VQ+ ++G++ F+ V VG+ +G+VGLG S+EV AIR A+ AK ++I VR G WG GR HTVP + GK SV+ + AP G G+ V Sbjct: 20 ENWEPKTELGRKVKDGEITDIDQILDKGLPIMELEIVDALLPD-LEEEVMDVNLVQRMHKSGRKVNFRVIVAVGNRNGYVGLGQGKSQEVGPAIRKAVDAAKYNLIKVRRGCGDWGCGCGRRHTVPFKIEGKMSSVSATLIPAPAGVGLAIGNV 172 HSP 2 Score: 25.409 bits (54), Expect = 1.481e-26 Identity = 13/29 (44.83%), Postives = 16/29 (55.17%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 K +L AGI DV + G T+T NF A Sbjct: 174 KTILSLAGIADVWSMCSGQTQTTINFAGA 202
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_NANEQ (30S ribosomal protein S5P OS=Nanoarchaeum equitans GN=rps5p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.265e-26 Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPV-------------QKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVR--MGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVA 628 ++W P TKLGRLV+EGKI +++I + I+E +I+D L+ + L+ E MK + QK+T G +TR++ +VGD DGHVG+G+ S ++ A AI AKL++I V G W G PH++P V GK GSV V + AP+G GIVA Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLLPN-LEVEFMKWRIIRGKFRSKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVA 167 HSP 2 Score: 27.7202 bits (60), Expect = 3.265e-26 Identity = 15/29 (51.72%), Postives = 17/29 (58.62%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 KK+ + AGI DV S G TKT N V A Sbjct: 172 KKIFRLAGIKDVWVRSFGKTKTKMNHVFA 200
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_NATPD (30S ribosomal protein S5P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps5p PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.510e-25 Identity = 61/154 (39.61%), Postives = 94/154 (61.04%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVI--PVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 W P T+LGR V +G+I ++ LP+KE +++D L+ L+DEV+ I VQ+ T +G+R +F+ VV+G+ DG+VG +V AI+ AI +AKL++I P+ G W ++ G +++ TGK GSV V + APRG G+ AA R Sbjct: 5 WEPRTRLGRKVADGEITSMQDALQSGLPLKEPELVDQLLPG-LEDEVLDINMVQRMTDSGRRVKFRCVVVIGNRDGYVGYAQGRDDQVGGAIQKAIDVAKLNIIDVPLGSGSWEDRPGGRNSLMRRTTGKAGSVEVELKPAPRGLGLAAAPTVR 157 HSP 2 Score: 28.4906 bits (62), Expect = 3.510e-25 Identity = 12/29 (41.38%), Postives = 18/29 (62.07%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 + VL+ AG++D T G+T+T N KA Sbjct: 157 RHVLELAGVEDAWTKCHGNTRTTLNLAKA 185
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_HALWD (30S ribosomal protein S5P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps5p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.939e-25 Identity = 59/152 (38.82%), Postives = 93/152 (61.18%), Query Frame = 2 Query: 182 DKWVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPV--RMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAA 631 D W P T+LGR+V++G + +EQ LP+KE +++D L+ L DEV+ I VQ+ T +G+R +F+ V +G+ +G +G +V +AI+ AI +AKL++I V G W + G +++ N GK GSVTV + AP+G G+ AA Sbjct: 9 DGWTPRTRLGRMVQDGDVTSMEQALNSGLPLKEPELVDQLLPG-LDDEVLDINMVQRMTDSGRRVKFRCVVAIGNRNGFLGYAEGRDDQVGSAIQKAIDVAKLNLISVDRGSGSWEDSAGGVNSLTRNAEGKAGSVTVEVMPAPQGLGLAAA 159 HSP 2 Score: 29.6462 bits (65), Expect = 5.939e-25 Identity = 12/27 (44.44%), Postives = 18/27 (66.67%), Query Frame = 1 Query: 646 VLQFAGIDDVITSSRGSTKTLGNFVKA 726 +L+ AG++D T S G+T+T N KA Sbjct: 165 ILELAGVEDAWTRSNGNTRTTVNLAKA 191
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_CENSY (30S ribosomal protein S5P OS=Cenarchaeum symbiosum GN=rps5p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.020e-23 Identity = 62/149 (41.61%), Postives = 88/149 (59.06%), Query Frame = 2 Query: 188 WVPVTKLGRLVREGKIRILEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRM--GYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVA 628 WVP T LG+ V G+I LE+I I+E II L+ LK EV+ + +QK T GQ TRFKA V G+ +G++G+G +K++ AI A A L+V P+++ G W + + H+VP V GK GSV + + APRG G+VA Sbjct: 27 WVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLLPD-LKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECRCDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVA 174 HSP 2 Score: 28.4906 bits (62), Expect = 4.020e-23 Identity = 12/31 (38.71%), Postives = 21/31 (67.74%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKAPL 732 +++L+ AG+ D T+++GST T + KA L Sbjct: 179 RRLLELAGLKDAYTTAKGSTPTTNSTSKAVL 209
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_LACSS (30S ribosomal protein S5 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rpsE PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 4.651e-12 Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 314 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 L+D V+ I V K + G+R RF A V+VGD +GHVG G ++EV AIR A+ AK ++I V K+G T+P V G+ G+ V + A G+GI A R Sbjct: 11 LEDRVVSINRVTKVVKGGRRLRFAAIVIVGDKNGHVGFGTGKAQEVPEAIRKAVEDAKKNLINV------PKVGT--TLPHEVIGRFGAGRVLLKPAVEGSGIAAGGAVR 112 HSP 2 Score: 26.1794 bits (56), Expect = 4.651e-12 Identity = 13/31 (41.94%), Postives = 21/31 (67.74%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKAPL 732 + V++ AGIDDV + + GS KT N ++A + Sbjct: 112 RAVMELAGIDDVTSKTLGS-KTAINVIRATI 141
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_BACSK (30S ribosomal protein S5 OS=Bacillus clausii (strain KSM-K16) GN=rpsE PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 2.230e-11 Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 311 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVA 628 +L+++V+ I V K + G+R RF A VVVGD +GHVG G+ ++EV AIR A+ AK ++I V + T+P + G+ G+ V + A G G++A Sbjct: 10 ELEEKVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGMGKAQEVPEAIRKAVEDAKKNLIEVPI--------VNTTIPHQIVGRFGAGRVFLKPASEGTGVIA 107 HSP 2 Score: 26.5646 bits (57), Expect = 2.230e-11 Identity = 13/32 (40.62%), Postives = 22/32 (68.75%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKAPLS 735 + VL+ AGI DV++ S GS+ + N V+A ++ Sbjct: 112 RAVLELAGIGDVLSKSLGSSNPI-NMVRATIT 142
BLAST of EY649897 vs. ExPASy Swiss-Prot
Match: RS5_PEDPA (30S ribosomal protein S5 OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rpsE PE=3 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 8.228e-11 Identity = 41/111 (36.94%), Postives = 59/111 (53.15%), Query Frame = 2 Query: 311 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRMGYWGNKIGRPHTVPCNVTGKCGSVTVRMGSAPRGAGIVAARVPR 643 +++D V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR A+ A+ S+I V + +G T+P G G + M A G+G+ A R Sbjct: 11 EIEDRVVAINRVTKVVKGGRRLRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAVETARKSLIEVPI------VGT--TLPHEAVGVYGGGRILMKPALEGSGVAAGGAVR 113 HSP 2 Score: 25.409 bits (54), Expect = 8.228e-11 Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 640 KKVLQFAGIDDVITSSRGSTKTLGNFVKA 726 + V++ AGIDDV TS R + T N V+A Sbjct: 113 RAVMELAGIDDV-TSKRLGSNTAVNVVRA 140 The following BLAST results are available for this feature:
BLAST of EY649897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649897 ID=EY649897; Name=EY649897; organism=Citrus sinensis; type=EST; length=940bpback to top |