EY649784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 3.643e-95 Identity = 178/238 (74.79%), Postives = 195/238 (81.93%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TMALSS SF GKAV +PS +E++ G+ +MRKT +K+ VSS SPWYGPDR KYLGPFSG+ PSYLTGEFPGDYGWDTA LSADP TFA NRELEVIHC WAMLGALGCVFPELLARNG F EAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAV+GY +AG PL EV DPLYPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 237 HSP 2 Score: 23.8682 bits (50), Expect = 3.643e-95 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT+ P Sbjct: 243 NLADHLADPVNNNAWSYATNFVP 265
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 1.377e-94 Identity = 176/238 (73.95%), Postives = 194/238 (81.51%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TMALSSS F GKAV L+ S +E++ G+++MRKT +K+ SS SPWYGPDR KYLGPFSG+ PSYLTGEFP DYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPEL ARNG F EAVWFKA A IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAV+GY +AG PL EV DPLYPG S DPLGLA+DP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 237 HSP 2 Score: 23.8682 bits (50), Expect = 1.377e-94 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT+ P Sbjct: 243 NLADHLADPVNNNAWSYATNFVP 265
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB24_PETSP (Chlorophyll a-b binding protein 25, chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 7.355e-94 Identity = 177/238 (74.37%), Postives = 196/238 (82.35%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TMA+SSS F GKAVN+ PS ++++ G+ +MRKT +K+ VSS SPWYGPDR KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPEL ARNG F EAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAV+GY +AG PL EV DPLYPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAAATMAISSSSFAGKAVNV-PSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 236
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 9.606e-94 Identity = 179/235 (76.17%), Postives = 192/235 (81.70%), Query Frame = 3 Query: 57 ATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 A S+MALSS S GKAV L PS E+ GR+SMRKT +K VSS SPWYGPDR KYLGPFSG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELL+RNG F EAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAV+GY IAG PL EVTDP+YPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 3 AASSMALSSPSLAGKAVKLGPSAPEV---GRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 233
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 2.140e-93 Identity = 176/238 (73.95%), Postives = 195/238 (81.93%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TMALSSS F GKAVN+ PS +E++ G+++MRKT +K+ VSS SPWYGPDR KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TFA NR+LEVIHC W MLGALGCVFPEL ARNG F EAVWFKA + IF EGGLDYLGNPSL+HAQSILAIWACQVVLMGAV+GY +AG PL EV DPLYPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAAATMALSSSSFAGKAVNV-PSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGLADDPEAFAELEV-KEIKNGRLAMFSMFGFFVQAIVTG 236
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 2.565e-93 Identity = 169/225 (75.11%), Postives = 185/225 (82.22%), Query Frame = 3 Query: 84 SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 + G+AV L+P+ E+ + +MRKT SKSVSS SPWYGPDR KYLGPFSG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELL+RNG F EAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAV+GY IAG PL EVTDP+YPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 2 TLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 225 HSP 2 Score: 23.8682 bits (50), Expect = 2.565e-93 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT+ P Sbjct: 231 NLADHLADPVNNNAWAYATNFVP 253
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 3.650e-93 Identity = 174/238 (73.11%), Postives = 193/238 (81.09%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TMALSSS F GK V L+PS +E++ G+ +MRKT +K+ VSS SPWYGPDR KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPEL ARNG F EAVW KA + IFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAV+GY +AG PL V DPLYPG S DPLGLA+DP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGLAEDPEAFAELKV-KETKNGRLAMFSMFGFFIQAIVTG 237
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 8.892e-91 Identity = 175/239 (73.22%), Postives = 190/239 (79.50%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA+STMALSS+ F GKAVN+ S R++MRKT +K+ +S SPWYGPDR YLGP SG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPELLARNG F EAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV+GY IAG PL EV DPLYPG S DPLGLADDP+AF EL + K G ++MFGFF QA V G Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSS---FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFGELKV-KELKKGRLAMLSMFGFFVQAIVTG 235 HSP 2 Score: 23.0978 bits (48), Expect = 8.892e-91 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADH+ADP YAT+ P Sbjct: 241 NLADHIADPVNNNAWAYATNFVP 263
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 1.298e-90 Identity = 172/236 (72.88%), Postives = 188/236 (79.66%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA STMALSS + GKAV +APS +EL GR+SMRKT VS SPWYGPDR KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFKA + IFSEGGLDYLGNPSL+HAQSIL+IWA QV+LMGAV+GY +AG PL E+ DPLYPG S DPLGLA+DP+ AEL + K NG +MFGFF QA V G Sbjct: 1 MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSD-SPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPERSAELKV-KELKNGRLAMFSMFGFFVQAIVTG 234
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 2.575e-90 Identity = 173/239 (72.38%), Postives = 191/239 (79.92%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS---VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA+STMALSS+ F GKAVN+ S L R++MRKT +K+ SS SPWYGPDR YLGP SG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGA++GY +AG PL EV DPLYPG + DPLGLADDP+AFA++ + K NG +MFGFF QA V G Sbjct: 1 MASSTMALSSTAFAGKAVNVPSS---LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKV-KELKNGRLAMFSMFGFFVQAIVTG 235 HSP 2 Score: 23.8682 bits (50), Expect = 2.575e-90 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT+ P Sbjct: 241 NLADHLADPVNNNAWAYATNFVP 263 The following BLAST results are available for this feature:
BLAST of EY649784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649784 ID=EY649784; Name=EY649784; organism=Citrus sinensis; type=EST; length=930bpback to top |