EY649784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 3.778e-90 Identity = 172/237 (72.57%), Postives = 188/237 (79.32%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGR-PLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA STMALSS +F GKAV L+P +E+ GR++MRKT + S SPWYG DR KYLGPFSG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPELLARNG F EAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GY +AG PL E D LYPG S DPLGLA DP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 236
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 3.675e-89 Identity = 173/238 (72.69%), Postives = 186/238 (78.15%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA STMA+SS+ G + + G GRI+MRKT K +S SPWYGPDR KYLGPFSG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELL+RNG F EAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV+GY IAG PL EV DPLYPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAASTMAISSTAMAGTPIKVGSFGE-----GRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 232 HSP 2 Score: 23.0978 bits (48), Expect = 3.675e-89 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADH+ADP YAT+ P Sbjct: 238 NLADHIADPVNNNAWAYATNFVP 260
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 5.455e-89 Identity = 173/237 (73.00%), Postives = 186/237 (78.48%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGS-KSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TMALSSS F GKAV S +E+ R+SMRKT + K V S PWYGPDR KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFK + IFSEGGL YLGNPSL+HAQSILAIWACQVVLMGAV+GY +AG PL EV DPLYPG S DPLGLADD +AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKVGS--PWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDAEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 234
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 1.064e-88 Identity = 171/238 (71.85%), Postives = 188/238 (78.99%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TM+LSSS F GKAV PS + L R++MRKT +K+ VSS SPWYG DR YLGP SG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPELLARNG F EA WFKA + IFS+GGLDYLGNPSL+HAQS+LAIWACQVVLMGAV+GY IAG PL E+ DPLYPG S DPLGLA+ P AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPS-SALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 236 HSP 2 Score: 22.7126 bits (47), Expect = 1.064e-88 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 766 DLADHLADP 792 DLADH+ADP Sbjct: 242 DLADHIADP 250
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 3.081e-88 Identity = 171/238 (71.85%), Postives = 189/238 (79.41%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGR-PLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA STMALSS +F GKAVNL+P+ +E+ GR++MRKT +K S SPWYG DR KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFKA + IFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GY +AG PL E D LYPG S DPLGLA DP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 237 HSP 2 Score: 22.7126 bits (47), Expect = 3.081e-88 Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 1 Query: 760 VGDLADHLADPA-IQCLGYATHLCP 831 + +LADHLADP +AT+ P Sbjct: 241 IENLADHLADPVNNNAWAFATNFVP 265
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 6.840e-88 Identity = 170/237 (71.73%), Postives = 186/237 (78.48%), Query Frame = 3 Query: 57 ATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRK--TGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 ++S+MALSS + GK + L PS EL R +MRK T K SS SPWYGPDR KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TF+ NRELEVIH WAMLGALGCVFPELL+RNG F EAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GY IAG PL EV DPLYPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 5 SSSSMALSSPTLAGKQLKLNPSSQELG-AARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 239 HSP 2 Score: 23.8682 bits (50), Expect = 6.840e-88 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT+ P Sbjct: 245 NLADHLADPVNNNAWSYATNFVP 267
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.164e-87 Identity = 173/240 (72.08%), Postives = 187/240 (77.92%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLA--PSGNELSNGGRISMRK--TGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA S+MALSS + GK V + PS EL G R +MRK T K SS SPWYGPDR KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TF+ NRELEVIH WAMLGALGCVFPELL+RNG F EAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GY IAG PL EV DPLYPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAASSMALSSPTLTGKPVETSANPSSQELG-GARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 238 HSP 2 Score: 22.7126 bits (47), Expect = 1.164e-87 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHL+DP YAT+ P Sbjct: 244 NLADHLSDPVNNNAWSYATNFVP 266
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.518e-87 Identity = 170/238 (71.43%), Postives = 188/238 (78.99%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVS-SCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGR-PLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA STMALSS +F GKAV L+P+ +E+ GR++MRKT +K S SPWYG DR KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFKA + IFS+GGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GY +AG PL E D LYPG S DPLGLA DP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 237 HSP 2 Score: 22.7126 bits (47), Expect = 1.518e-87 Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 1 Query: 760 VGDLADHLADPA-IQCLGYATHLCP 831 + +LADHLADP +AT+ P Sbjct: 241 IENLADHLADPVNNNAWAFATNFVP 265
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 2.993e-87 Identity = 162/206 (78.64%), Postives = 172/206 (83.50%), Query Frame = 3 Query: 141 GRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 GR+SMRKT SK+VSS SPWYGPDR KYLGPFSG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EA WFKA + IFSEGGLDYLGN SLIHAQSILAIWA QV+LMGAV+GY IAG PL EVTDP+YPG S DPL LADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 11 GRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLALADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 215
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 3.370e-87 Identity = 164/232 (70.69%), Postives = 181/232 (78.02%), Query Frame = 3 Query: 93 GKAVNLAPSGNELSNGG-------RISMRKTGSKSVS---SCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 G+ +L P N+L G R++MRK +K ++ S SPWYGPDR YLGPFSG+PPSYLTGEFPGDYGWDTAGLSADP FA NRELEVIHC WAMLGALGCVFPELLARNG F EAVWFKA A IFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAV+GY IAG PL EVTDP+YPG S DPLGLA+DP+AFAEL + K NG +MFGFF QA V G Sbjct: 14 GQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLAEDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 244 HSP 2 Score: 24.2534 bits (51), Expect = 3.370e-87 Identity = 12/25 (48.00%), Postives = 15/25 (60.00%), Query Frame = 1 Query: 760 VGDLADHLADPA-IQCLGYATHLCP 831 + +LADHLADP YAT+ P Sbjct: 248 IENLADHLADPVNNNAWAYATNFVP 272 The following BLAST results are available for this feature:
BLAST of EY649784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY649784 ID=EY649784; Name=EY649784; organism=Citrus sinensis; type=EST; length=930bpback to top |