EY649784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 320.087 bits (819), Expect = 4.397e-87 Identity = 172/239 (71.97%), Postives = 186/239 (77.82%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPS-GNELSNGGRISMRKTGSK---SVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TMALSS + +A APS + L RI+MRKT +K + SS SPWYG DR YLGP SG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAV+GY IAG PL EV DPLYPG + DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAAATMALSSPVMARA---APSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGLADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 235 HSP 2 Score: 23.8682 bits (50), Expect = 4.397e-87 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT+ P Sbjct: 241 NLADHLADPVNNNAWAYATNFVP 263
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 1.273e-86 Identity = 167/245 (68.16%), Postives = 188/245 (76.73%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSVSSC--SPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA+ + +F G ++ + P N+L G R++MRK TG KSV++ SPWYGPDR YLGPFSG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFKA A IFSEGGLDYLG+P LIHAQSILAIWACQV+LMGA++GY +AG PL EVTDP+YPG + DPLGLADDPDAFAEL + K NG +MFGFF QA V G Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 248 HSP 2 Score: 24.2534 bits (51), Expect = 1.273e-86 Identity = 12/25 (48.00%), Postives = 15/25 (60.00%), Query Frame = 1 Query: 760 VGDLADHLADPA-IQCLGYATHLCP 831 + +LADHLADP YAT+ P Sbjct: 252 IENLADHLADPVNNNAWAYATNFVP 276
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 4.810e-86 Identity = 171/236 (72.46%), Postives = 183/236 (77.54%), Query Frame = 3 Query: 54 MATSTMALSSS-FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA STMALSSS G+A+ LAPS EL G R+SMRKT K+VSS SPWYGPDR KYLGPFSG+ PSYLTGEF G LSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWA QV+LMGAV+GY IAG PL EVTDP+YPG S DPLGLADDP+A AEL + K NG +MFGFF QA V G Sbjct: 1 MAASTMALSSSSLAGQAMKLAPSTPELGVG-RVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEALAELKV-KELKNGRLAMFSMFGFFVQAIVTG 226 HSP 2 Score: 28.4906 bits (62), Expect = 4.810e-86 Identity = 14/23 (60.87%), Postives = 15/23 (65.22%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT LCP Sbjct: 232 NLADHLADPVNNNAWAYATKLCP 254
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 6.270e-86 Identity = 165/245 (67.35%), Postives = 188/245 (76.73%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVN-LAPSGNELSNGG------RISMRK-TGSKSVSSC--SPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA+ + +F G ++ + P N+L G R++MRK TG KSV++ SPWYGPDR YLGPFSG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFKA A IFSEGGLDYLG+P LIHAQSILAIWACQV+LMGA++GY +AG PL EVTDP+YPG + DPLGLADDPDAFA++ + K NG +MFGFF QA V G Sbjct: 5 MASCGIGSRCAFAGAQLSSVKPQNNQLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRVAGGPLGEVTDPIYPGGNFDPLGLADDPDAFADVKV-KEIKNGRLAMFSMFGFFVQAIVTG 248 HSP 2 Score: 24.2534 bits (51), Expect = 6.270e-86 Identity = 12/25 (48.00%), Postives = 15/25 (60.00%), Query Frame = 1 Query: 760 VGDLADHLADPA-IQCLGYATHLCP 831 + +LADHLADP YAT+ P Sbjct: 252 IENLADHLADPVNNNAWAYATNFVP 276
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 316.235 bits (809), Expect = 6.273e-86 Identity = 170/238 (71.43%), Postives = 184/238 (77.31%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TMALSS + GKA ++ GRI+MRK+ +K +S SPWYG DR YLGP SG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELLARNG F EAVWFKA + IFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGAV+GY IAG PL EV DPLYPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MAAATMALSSPALAGKAAA------KVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 231 HSP 2 Score: 23.8682 bits (50), Expect = 6.273e-86 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT+ P Sbjct: 237 NLADHLADPVNNNAWAYATNFVP 259
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 1.664e-83 Identity = 163/240 (67.92%), Postives = 181/240 (75.42%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNELSNG-----GRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MATST AL+S+F G+ + NELS R+ M SK+ S S WYG DR YLGPFSG PPSYL+GEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCV PELLA+NG F EAVWFKA + IF+EGGLDYLGNPSL+HAQSILAIWACQV+LMGAV+GY +AG PL EV DP+YPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MATSTAALTSTFSGQQLKPV---NELSRKVGAGEARVQMMAPKSKAPSG-SIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 235 HSP 2 Score: 26.9498 bits (58), Expect = 1.664e-83 Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 1 Query: 760 VGDLADHLADPAI-QCLGYATHLCP 831 + +L+DHLADPA+ YAT+ P Sbjct: 239 IENLSDHLADPAVNNAWAYATNFTP 263
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 1.102e-81 Identity = 160/241 (66.39%), Postives = 181/241 (75.10%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +T S++ G++ L NELS R++MR+T SKS S + WYG DR K+LGPFSG+ PSYL GEF GDYGWDTAGLS+DP TFA NRELEVIH WAMLGALGC+ PELLA++G F EAVWFKA A IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAV+GY +AG PL EVTDP+YPG S DPLGLADDPD FAEL + K NG +MFGFF QA V G Sbjct: 1 MAAATAMHSTALAGQS--LVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 238
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 302.753 bits (774), Expect = 1.879e-81 Identity = 161/241 (66.80%), Postives = 179/241 (74.27%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MATS + S+F G+ NEL GGR+SMR+T + +S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPE+L++NG F EAVWFKA + IFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG V+GY + G PL E DP+YPG + DPLGLADDPDAFAEL + K NG +MFGFF QA V G Sbjct: 1 MATSAIQ-QSAFAGQTA--LKQSNELVCKIGAVGGGRVSMRRTVKSAPTSI--WYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 235
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 1.397e-79 Identity = 149/199 (74.87%), Postives = 160/199 (80.40%), Query Frame = 3 Query: 162 TGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 T K SS SPW+GPD KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPELL+RNG F EAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWA QV+LMGAV+GY IAG PL EV DPLYPG S DPLGLA+ P+AFAEL + K NG +MFGFF A V G Sbjct: 1 TTKKVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEVPEAFAELKV-KELKNGRLAMFSMFGFFVPAIVTG 198 HSP 2 Score: 23.8682 bits (50), Expect = 1.397e-79 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT+ P Sbjct: 204 NLADHLADPVNNNAWSYATNFVP 226
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 5.117e-79 Identity = 157/240 (65.42%), Postives = 177/240 (73.75%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA S + ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPE+L++NG F EAVWFKA A IFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG V+GY + G PL E D +YPG + DPLGLADDPD FAEL + K NG +MFGFF QA V G Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 233 The following BLAST results are available for this feature:
BLAST of EY649784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649784 ID=EY649784; Name=EY649784; organism=Citrus sinensis; type=EST; length=930bpback to top |