EY649784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 294.664 bits (753), Expect = 5.117e-79 Identity = 157/240 (65.42%), Postives = 177/240 (73.75%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA S + ++SF+G A P +EL +GGRI+MR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGCVFPE+L++NG F EAVWFKA A IFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG V+GY + G PL E D +YPG + DPLGLADDPD FAEL + K NG +MFGFF QA V G Sbjct: 1 MAASALHQTTSFLGTA----PRRDELVRRVGDSGGRITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 233
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 293.893 bits (751), Expect = 6.871e-79 Identity = 157/238 (65.97%), Postives = 174/238 (73.11%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA +TMA++S + VGK A ++ GRI+MRKT +K S SPWYG DR YLGP SG PPSYLTGEFPGDYGWDT GLSADP TFA NRELEVIHC WA+ LGCVFPELLARNG F E VWFKA + IFSEGGL + GNPSL+HAQSILAIWACQVVLMGAV+GY +AG L EV DPLY G S DPLGL DDP+ FAEL + K NG +MFGFF QA V G Sbjct: 1 MAAATMAITSRALVGKP---AAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARNGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGLGDDPERFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 234 HSP 2 Score: 22.7126 bits (47), Expect = 6.871e-79 Identity = 11/25 (44.00%), Postives = 14/25 (56.00%), Query Frame = 1 Query: 760 VGDLADHLADPA-IQCLGYATHLCP 831 + +LADHL DP YAT+ P Sbjct: 238 IENLADHLTDPVNNNAWAYATNFVP 262
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.489e-78 Identity = 158/241 (65.56%), Postives = 177/241 (73.44%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNELSNG------GRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MAT + S+FVG+AV S NE GRI+MR+T + S WYG DR KYLGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPE+L++NG F EAVWFKA + IFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG V+GY + G PL E D +YPG + DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MATCAIQ-QSAFVGQAVG--KSQNEFIRKVGNFGEGRITMRRTVKSAPQSI--WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 235
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 3.317e-78 Identity = 157/240 (65.42%), Postives = 175/240 (72.92%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MAT++ SSS G+ + L P NEL + RI+MR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTA +SADP TFA NRELEVIHC WAMLGALGCVFPELLA+NG F EAVWFKA A IFSEGGLDY GNP+LIHAQSILAIWACQVVLMG ++GY + G L E DPL PG + DPLGLADDP+A AEL + K NG +MFGFF QA V G Sbjct: 1 MATASAIQSSSLAGQTL-LRPQQNELVKKVGTAQARITMRRTVRSAPESI--WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 236
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 5.658e-78 Identity = 156/241 (64.73%), Postives = 176/241 (73.03%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNELS------NGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MATS + S+F G+ S NEL NGGR +MR+T + S WYG DR KYLGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPE+L++NG F EAVWFKA + IFSEGGLDYLGNP+LIHAQSILA+WA QVVLMG ++GY + G PL E D +YPG + DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MATSAIE-QSAFAGQTA--LKSQNELVRKIGSFNGGRATMRRTVKSAPQSI--WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 235
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 290.041 bits (741), Expect = 1.260e-77 Identity = 149/210 (70.95%), Postives = 165/210 (78.57%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAF 668 MATST+ S+F G+ + L P NEL NGGR+SMR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPELLA+NG F EAVWFKA + IF EGGLDYLGNP+L+HAQSILAIWACQVVLMGAV+GY + G PL E D LYPG + DPLGLA+DP+AF Sbjct: 1 MATSTIQ-QSAFAGQTL-LKPQ-NELVRKVGGNGGRVSMRRTIKSAPESI--WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGLAEDPEAF 205
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.646e-77 Identity = 157/241 (65.15%), Postives = 175/241 (72.61%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNELSN------GGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MATS + S+F G+ S NEL GGR +MR+T + S WYG DR KYLGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPE+L++NG F EAVWFKA + IFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG V+GY + G PL E D +YPG + DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 MATSAIQ-QSAFAGQTA--LKSQNELVRKIGSFGGGRATMRRTVKSAPQSI--WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 235
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 4.790e-77 Identity = 146/207 (70.53%), Postives = 162/207 (78.26%), Query Frame = 3 Query: 138 GGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 GGR++MR+T + S WYG DR KYLGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIHC WAMLGALGCVFPE+L++NG F EAVWFKA + IFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG V+GY + G PL E D +YPG + DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 4 GGRVTMRRTVKSAPQSI--WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 207
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 2.373e-76 Identity = 147/206 (71.36%), Postives = 162/206 (78.64%), Query Frame = 3 Query: 141 GRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 GR SMR+T K+V S WYG DR K+LGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGC+FPELL++NG F EAVWFKA A IFSEGGLDYLGNP+L+HAQSILAIWA QVVLMG ++GY + G PL E DPLYPG + DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 32 GRFSMRRT-VKAVPQ-SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPEAFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 234 HSP 2 Score: 23.483 bits (49), Expect = 2.373e-76 Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 1 Query: 760 VGDLADHLADP-AIQCLGYATHLCP 831 + +LADH+ADP A +AT+ P Sbjct: 238 IENLADHIADPVANNAWAFATNFVP 262
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 2.379e-76 Identity = 142/177 (80.23%), Postives = 151/177 (85.31%), Query Frame = 3 Query: 228 PFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 PFSG+PPSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH TWAMLGALGCVFPELL+RNG F EAVWFKA + IFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAV+GY IAG PL EVTDP+YPG S DPLGLADDP+AFAEL + K NG +MFGFF QA V G Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 176 HSP 2 Score: 23.8682 bits (50), Expect = 2.379e-76 Identity = 12/23 (52.17%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 766 DLADHLADPA-IQCLGYATHLCP 831 +LADHLADP YAT+ P Sbjct: 182 NLADHLADPVNNNAWAYATNFVP 204 The following BLAST results are available for this feature:
BLAST of EY649784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649784 ID=EY649784; Name=EY649784; organism=Citrus sinensis; type=EST; length=930bpback to top |