EY649784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 4.055e-76 Identity = 158/241 (65.56%), Postives = 173/241 (71.78%), Query Frame = 3 Query: 54 MATSTMALSSSFVGKAVNLAPSGNEL----SNGG--RISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MATS + S+F GK GNE N G R +MR+T + S WYGPDR KYLGPFS PSYLTGEFPGDYGWDTAGLSADP TFA NRELEVIH WAMLGALGC FPELL +NG F EAVWFKA + IF+EGGLDYLGNP+LIHAQSILAIWA QVVLMG V+GY + G PL E DPLYPG + DPLGLADDPD+FAEL + K NG +MFGFF QA V G Sbjct: 1 MATSAIQ-QSAFTGKTG--LRQGNEFIRKRGNFGQARFTMRRTVKSAPESI--WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKV-KELKNGRLAMFSMFGFFVQAIVTG 235
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 1.888e-65 Identity = 142/225 (63.11%), Postives = 157/225 (69.78%), Query Frame = 3 Query: 90 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPGTD 758 + K L P + L +M K +KS S S R KYLGPFSG+ PSYLTGEFPGDYGWDTAGLSA P TFA NRELEVIH AM ALGC+FPELL+ G F EAVWFKA A IFSEGGLDYLGNPSL+HAQSILAIW +V+LMGAV+GY IA PL EVTDPLYPG S D LGLA+D +AFAEL + K NG +MFGFF QA V D Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTC--DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYPG-SFDSLGLAEDTEAFAELKV-KELKNGRLAMFSMFGFFVQAIVSRKD 240
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.466e-65 Identity = 132/205 (64.39%), Postives = 153/205 (74.63%), Query Frame = 3 Query: 156 RKTGSKSV---SSCSPWYGPDRFKYLGPFSGDP-PSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 +KT +K+ SS +YGP+R K+LGP+S + P+YLTGEFPGDYGWDTAGLSADP TF RELE+IH WAMLGALGC PELLA++G F EAVWFKA A IFSEGGLDYLGNPSL+HAQ+I+A A QV+LMG ++GY + G P E DPLYPG S DPLGLADDPD FAEL + K NG +MFGFF QA V G Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKV-KEIKNGRLASFSMFGFFVQAIVTG 223
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 3.936e-63 Identity = 126/189 (66.67%), Postives = 141/189 (74.60%), Query Frame = 3 Query: 195 WYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARN-GFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 WYGPDR K+LGPFS + P+YLTGEFPGDYGWDTAGLSADP TF RELEVIH WA+LGALG + PELL+ G F E VWFKA A IFSEGGLDYLG+P+LIHAQ+I+A A QVVLMG ++GY + G P E DPLYPG S DPLGLADDPD FAEL + K NG + FGFF QA V G Sbjct: 39 WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGLADDPDTFAELKV-KEIKNGRLAMFSCFGFFVQAIVTG 226
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 4.352e-62 Identity = 134/236 (56.78%), Postives = 160/236 (67.80%), Query Frame = 3 Query: 57 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLAR-NGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCS-SDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 +++T+ ++ F+G+ N P + ++ G S R T S + WYGPDR KYLGPFS PSYL GEFPGDYGWDTAGLSADP FA NR LEVIH WAMLGALGC+FPE+L + +F E VWFKA + IFS+GGLDYLGNP+L+HAQSILA+ QVVLMG V+G+ I G P + LYPG DPLGLADDP FAEL + K NG +MFGFF QA V G Sbjct: 9 SSTTVVKATPFLGQTKNANPLRDVVAMG---SARFTMSNDL-----WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 235
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 6.285e-61 Identity = 137/239 (57.32%), Postives = 155/239 (64.85%), Query Frame = 3 Query: 54 MATSTMALSS-SFVGKAVNLAPSGNELSNGG-RISMRKTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLAR-NGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCS-SDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 MA++ MA +S + V K L+ G S R T + WYGPDR KYLGPFS PSYL GEFPGDYGWDTAGLSADP FA NR LEVIH WAMLGALGCVFPE+L + G F E VWFKA + IFSEGGLDYLGNP+L+HAQSILA+ QV+LMG V+G+ I G + LYPG DPLGLADDP FAEL + K NG +MFGFF QA V G Sbjct: 1 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 238
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.790e-55 Identity = 118/193 (61.14%), Postives = 135/193 (69.95%), Query Frame = 3 Query: 195 WYGPDRFKYLGPFS-GDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLAR-NGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAG--RPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNGGYVTMF---GFFGQA*VPG 752 +YGPDR K+LGPFS D P YLTGEFPGDYGWDTAGLSADP TFA RE+E+IH WA+LGALG + PELL++ G F E VWFKA A IF++GGL+YLGN SLIHAQSI+A A QVVLMG + Y G + D LYPG DPLGLADDPD FAEL + + G + MF GFF QA V G Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDDLDTLYPGGPFDPLGLADDPDTFAELKVKEI--KNGRLAMFSCLGFFVQAIVTG 223
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.188e-51 Identity = 118/203 (58.13%), Postives = 135/203 (66.50%), Query Frame = 3 Query: 159 KTGSKSVSSCSPWYGPDRFKYLGPFSGDPPSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLA-RNGFNFCEA-VWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNGGYVTMF---GFFGQA*VPG 752 K SKS SS + +YGPD P TGEFPGDYGWDTAGLSADP TF RELE+IH +LGALG V PELLA +G F +A +WFKA A IF +GGL+YLGNPSLIHAQ+I+A A QVVLMG V+GY + G P E DPLYPG + DPLGLADDPD FAEL + + G + MF GFF QA V G Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGLADDPDTFAELKVKEI--KNGRLAMFACLGFFVQAIVTG 244
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 7.476e-38 Identity = 83/121 (68.60%), Postives = 92/121 (76.03%), Query Frame = 3 Query: 396 ELLARNGFNFCEAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 ELL +NG F EAVWFKA A IFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG ++GY + G PL E DPLYPG + DPLGLADDP+A AEL + K NG +MFGFF QA V G Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKV-KEIKNGRLAMFSMFGFFVQAIVTG 120
BLAST of EY649784 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.754e-27 Identity = 89/206 (43.20%), Postives = 107/206 (51.94%), Query Frame = 3 Query: 168 SKSVSSCSP----WYGPDRFKYLGPFSGDP---PSYLTGEFPGDYGWDTAGLSADP*TFANNRELEVIHCTWAMLGALGCVFPELLARNGFNFC--EAVWFKAAAHIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVDGYIIAGRPLREVTDPLYPGCSSDPLGLADDPDAFAELMLTKSXWNG--GYVTMFGFFGQA*VPG 752 SK+VS S WYGPDR +L D P YL GE GDYG+D GL P FA + E+IH WAMLGA G + PE L + G N C EAVWFK A + L+Y G I +LA+ A +VVL+G + Y I + D L+PG DPLGLA DP+ A L+ K NG M GFF QA V G Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGAN-CGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLGGAEYYRITNG--LDFEDKLHPGGPFDPLGLAKDPEQGA-LLKVKEIKNGRLAMFAMLGFFIQAYVTG 247 The following BLAST results are available for this feature:
BLAST of EY649784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >EY649784 ID=EY649784; Name=EY649784; organism=Citrus sinensis; type=EST; length=930bpback to top |