EY649777 | Citrus Genome Database

Overview


Name	EY649777
Unique Name	EY649777
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	921

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN1_BOVIN (Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.094e-52
Identity = 104/169 (61.54%), Postives = 129/169 (76.33%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSYP 744
            SGIVTRRPLVLQL        EYAEFLH   KKFTDF  VR EI+ ETDRVTG +K ISPVPI+L +YSP+V+NLTL+DLPG+TKV V  QP  +  +I  M+  ++ K NCLILA++PAN DLA SDA+K+++EVDP G+RT GV+T LDLMD+GT+A D+LE +  P
Sbjct:   61 SGIVTRRPLVLQLVNATT---EYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKVAKEVDPQGQRTIGVITKLDLMDEGTDARDVLENKLLP 226

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN_DROME (Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 4.041e-52
Identity = 103/169 (60.95%), Postives = 131/169 (77.51%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSYP 744
            SGIVTRRPL+LQL     G+ EY EFLH+  KKF+ F  +RKEI++ETDRVTG +K IS +PI+L +YSP+V+NLTLIDLPG+TKVA+  QP  +  +I+ M+  +I K  CLILA+TPAN DLA SDA+KL++EVDP G RT GV+T LDLMD+GT+A DILE +  P
Sbjct:   56 SGIVTRRPLILQLIN---GVTEYGEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENKLLP 221

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN3_RAT (Dynamin-3 OS=Rattus norvegicus GN=Dnm3 PE=1 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 4.041e-52
Identity = 107/169 (63.31%), Postives = 129/169 (76.33%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSYP 744
            SGIVTRRPLVLQL  ++    EYAEFLH   KKFTDF  VR EI+ ETDRVTG +K IS VPI+L +YSP+V+NLTLIDLPGITKV V  QP  +  +I  M+  +I + NCLILA+TPAN DLA SDA+KL++EVDP G RT GV+T LDLMD+GT+A D+LE +  P
Sbjct:   61 SGIVTRRPLVLQLVTSKA---EYAEFLHCKGKKFTDFDEVRHEIEAETDRVTGMNKGISSVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIRDMIMQFITRENCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLP 226

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN3_MOUSE (Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.277e-52
Identity = 106/169 (62.72%), Postives = 129/169 (76.33%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSYP 744
            SGIVTRRPLVLQL  ++    EYAEFLH   KKFTDF  VR EI+ ETDRVTG +K IS +PI+L +YSP+V+NLTLIDLPGITKV V  QP  +  +I  M+  +I + NCLILA+TPAN DLA SDA+KL++EVDP G RT GV+T LDLMD+GT+A D+LE +  P
Sbjct:   61 SGIVTRRPLVLQLVTSKA---EYAEFLHCKGKKFTDFDEVRHEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIRDMIMQFITRENCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLP 226

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN3_HUMAN (Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4)

HSP 1 Score: 204.527 bits (519), Expect = 6.892e-52
Identity = 106/169 (62.72%), Postives = 129/169 (76.33%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSYP 744
            SGIVTRRPLVLQL  ++    EYAEFLH   KKFTDF  VR EI+ ETDRVTG +K IS +PI+L +YSP+V+NLTLIDLPGITKV V  QP  +  +I  M+  +I + NCLILA+TPAN DLA SDA+KL++EVDP G RT GV+T LDLMD+GT+A D+LE +  P
Sbjct:   61 SGIVTRRPLVLQLVTSKA---EYAEFLHCKGKKFTDFDEVRLEIEAETDRVTGMNKGISSIPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIREMIMQFITRENCLILAVTPANTDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLP 226

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN2_BOVIN (Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 9.001e-52
Identity = 105/169 (62.13%), Postives = 132/169 (78.11%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSYP 744
            SGIVTRRPL+LQL  ++    EYAEFLH   +KFTDF  VR+EI+ ETDRVTG +K ISPVPI+L IYSP+V+NLTLIDLPGITKV V  QP+ +  +I+ M+  +I + + LILA+TPAN DLA SDA+KL++EVDP G RT GV+T LDLMD+GT+A D+LE +  P
Sbjct:   61 SGIVTRRPLILQLIFSKT---EYAEFLHCKSRKFTDFEEVRQEIEAETDRVTGTNKGISPVPINLRIYSPHVLNLTLIDLPGITKVPVGDQPQDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLP 226

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN2_RAT (Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.176e-51
Identity = 105/169 (62.13%), Postives = 131/169 (77.51%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSYP 744
            SGIVTRRPL+LQL  ++    EYAEFLH   KKFTDF  VR+EI+ ETDRVTG +K ISPVPI+L +YSP+V+NLTLIDLPGITKV V  QP  +  +I+ M+  +I + + LILA+TPAN DLA SDA+KL++EVDP G RT GV+T LDLMD+GT+A D+LE +  P
Sbjct:   61 SGIVTRRPLILQLIFSKT---EYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLP 226

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN2_MOUSE (Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 1.176e-51
Identity = 105/169 (62.13%), Postives = 131/169 (77.51%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSYP 744
            SGIVTRRPL+LQL  ++    EYAEFLH   KKFTDF  VR+EI+ ETDRVTG +K ISPVPI+L +YSP+V+NLTLIDLPGITKV V  QP  +  +I+ M+  +I + + LILA+TPAN DLA SDA+KL++EVDP G RT GV+T LDLMD+GT+A D+LE +  P
Sbjct:   61 SGIVTRRPLILQLIFSKT---EYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLP 226

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 3.421e-51
Identity = 103/168 (61.31%), Postives = 130/168 (77.38%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSY 741
            SGIVTRRPL+LQL +      EYAEFLH    +F DF  VRKEI++ETDRVTG++K ISP PI+L ++SPNV+NLTLIDLPG+TKV V  QP  +  +I  M+ ++I +  CLILA+TPAN DLATSDA+KL++EVDP G RT GVLT LDLMD+GT+A +ILE + +
Sbjct:   63 SGIVTRRPLILQLIQDR---NEYAEFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLDLMDEGTDAREILENKLF 227

[Close]

BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: DYN2_HUMAN (Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 4.467e-51
Identity = 104/169 (61.54%), Postives = 131/169 (77.51%), Query Frame = 1

Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTNALDILEGRSYP 744
            SGIVTRRPL+LQL  ++    E+AEFLH   KKFTDF  VR+EI+ ETDRVTG +K ISPVPI+L +YSP+V+NLTLIDLPGITKV V  QP  +  +I+ M+  +I + + LILA+TPAN DLA SDA+KL++EVDP G RT GV+T LDLMD+GT+A D+LE +  P
Sbjct:   61 SGIVTRRPLILQLIFSKT---EHAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLP 226

The following BLAST results are available for this feature:

BLAST of EY649777 vs. ExPASy Swiss-Prot

BLAST of EY649777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81


Match Name	E-value	Identity	Description
DYN1_BOVIN	3.094e-52	61.54	Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1	[more]
DYN_DROME	4.041e-52	60.95	Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=...	[more]
DYN3_RAT	4.041e-52	63.31	Dynamin-3 OS=Rattus norvegicus GN=Dnm3 PE=1 SV=2	[more]
DYN3_MOUSE	5.277e-52	62.72	Dynamin-3 OS=Mus musculus GN=Dnm3 PE=1 SV=1	[more]
DYN3_HUMAN	6.892e-52	62.72	Dynamin-3 OS=Homo sapiens GN=DNM3 PE=1 SV=4	[more]
DYN2_BOVIN	9.001e-52	62.13	Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1	[more]
DYN2_RAT	1.176e-51	62.13	Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1	[more]
DYN2_MOUSE	1.176e-51	62.13	Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2	[more]
DYN1_CAEEL	3.421e-51	61.31	Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV...	[more]
DYN2_HUMAN	4.467e-51	61.54	Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-100-003-D06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649777 ID=EY649777; Name=EY649777; organism=Citrus sinensis; type=EST; length=921bp
CCCACGCGTCCGGATCAAACTCTTTAAGTCAATAGCTTCGGAGAATTGAA
CAAGTGAACTCAATTAAAAGATGTCTAAATCAAAAGTTACATTAGTTGAA
TTCCTGCTTCGTTTTAGGAAAACTGGAACTAAAGCATATCATAATCAAAA
GATTTTAAGTGATCTTGGAAAATTTATGTGCATGCAAATGAAGAAAATAA
CTTATAATTTTTGGTTCTGAAGTATTTTGTGTAATTTTCAGGTATTGTGA
CAAGGAGGCCTTTGGTGCTGCAATTGCACAAGACAGAGCCTGGGCTACAG
GAGTATGCAGAGTTCCTTCACTTGCCAAAGAAAAAGTTCACCGATTTCTC
TATGGTTCGGAAAGAAATTCAAGAAGAAACTGATAGAGTAACTGGGAAAT
CAAAACAAATTTCTCCAGTTCCCATCCATCTTAGTATCTATTCCCCAAAT
GTGGTCAACTTAACACTCATAGATTTGCCGGGTATAACAAAGGTTGCTGT
AGAGGGGCAGCCAGAGAGTGTCGTCCTGGAGATAGAGACAATGGTTCGTT
CGTATATTGAGAAGCCAAACTGCCTCATTTTGGCCATAACTCCAGCCAAT
CAAGATCTGGCAACATCAGATGCTGTCAAACTCTCTAGAGAAGTTGATCC
AACTGGTGAGAGGACATTTGGTGTGTTGACATAGCTTGATTTGATGGACA
AAGGAACAAATGCTTTGGATATTCTTGAAGGGCGTTCTTATCCACTTCAC
ACCCTTGGGTTGGGATTGTGAACCGTTCACAGCTGTATCATAAAAATGTG
GATATGATTGCTGCTCGACGAAGGAGCATGAGTTTTTTGCCACAGTCCTG
ATATGGGACATTAGCCACAAAATTGGGGTCTGATATCTGCAAAGCTCTCT
CAAGCATTGGAGNCATATTAA