EY649777

Overview
NameEY649777
Unique NameEY649777
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX2_SHEEP (Interferon-induced GTP-binding protein Mx2 OS=Ovis aries GN=MX2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.198e-29
Identity = 74/176 (42.05%), Postives = 111/176 (63.07%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTE---PGLQEY---AEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGT--NALDILEGRSY 741
            SGI+TR PLVL+L K E    G   Y    + LH P       S V +EI+   + + G    IS   I+L + SP V +LTLIDLPGIT+VAVE QP+ + L+I+ ++++YI++   + L + P N D+AT++A+ +++EVDP G+RT G+LT  DL+DKGT    L +++  +Y
Sbjct:  147 SGIITRCPLVLKLTKRECEWTGKITYRNVTQQLHNP-------SEVEREIRRAQNIIAGNGVGISHELINLEVTSPEVPDLTLIDLPGITRVAVENQPQDIGLQIKALIKTYIQRQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDKGTEKGVLKVMQNLTY 315          
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX2_PIG (Interferon-induced GTP-binding protein Mx2 OS=Sus scrofa GN=MX2 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.198e-29
Identity = 69/170 (40.59%), Postives = 108/170 (63.53%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGTN--ALDILEGRSY 741
            SGI+TR PL L+L K E   Q    +  + + +  D S V +EI++  D + G    IS   I L + SP V +LTLIDLPGIT+VAV  QP+ + L+I+ ++R YI++   + L + P N D+AT++A+++++EVDP G+RT G+LT  DL+D G     L++++  +Y
Sbjct:  144 SGIITRCPLALRLKKKECPWQGRISYRKV-ELQLQDPSQVEREIRKAQDAIAGSGVGISHELISLEVTSPEVPDLTLIDLPGITRVAVGNQPQDIGLQIKALIRKYIQEQQTINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDTGAEKVVLNVMQNLTY 312          
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX2_HUMAN (Interferon-induced GTP-binding protein Mx2 OS=Homo sapiens GN=MX2 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.398e-28
Identity = 69/171 (40.35%), Postives = 105/171 (61.40%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGT--NALDILEGRSYP 744
            SGIVTR PLVL+L K               + +  D   V KEI +  + + G  + IS   I L I SP V +LT+IDLPGIT+VAV+ QP  + L+I+ +++ YI++   + L + P N D+AT++A+ ++ EVDP G+RT G+LT  DLMD+GT  + ++++   +YP
Sbjct:  147 SGIVTRCPLVLKLKKQPCEAWAGRISYRNTELELQDPGQVEKEIHKAQNVMAGNGRGISHELISLEITSPEVPDLTIIDLPGITRVAVDNQPRDIGLQIKALIKKYIQRQQTINLVVVPCNVDIATTEALSMAHEVDPEGDRTIGILTKPDLMDRGTEKSVMNVVRNLTYP 317          
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX2_BOVIN (Interferon-induced GTP-binding protein Mx2 OS=Bos taurus GN=MX2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.115e-28
Identity = 70/170 (41.18%), Postives = 109/170 (64.12%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGT--NALDILEGRSY 741
            SGI+TR PLVL+L K E        + ++ ++   + S V  EI+   + + G    IS   I+L I SP V +LTLIDLPGIT+VAVE QP+ + L+I+ +++ YI++   + L + P N D+AT++A+ +++EVDP G+RT G+LT  DL+DKGT    L +++  +Y
Sbjct:  144 SGIITRCPLVLKLTKRECEWTGKITYRNITQQ-LQNPSEVEWEIRRAQNIIAGNGLGISHELINLEITSPEVPDLTLIDLPGITRVAVENQPQDIGLQIKALIKKYIQRQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDKGTEKGVLKVMQNLTY 312          
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX_SINCH (Interferon-induced GTP-binding protein Mx OS=Siniperca chuatsi GN=mx PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 4.069e-28
Identity = 68/158 (43.04%), Postives = 105/158 (66.46%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLP-KKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGT 708
            SGIVTR PL L++ + + G + Y +  +   +++  D + V K+I+E  D + G    IS   I L I SP V +LTLIDLPGI +VAV+GQPE++  +I+ +++++I K   + L + P N D+AT++A+ +++ VDP GERT G+LT  DL+DKGT
Sbjct:   62 SGIVTRCPLELKMKRKKEGEEWYGKISYQNHEEEIEDPADVEKKIREAQDEMAGVGVGISDDLISLEIGSPGVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQTFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPDLVDKGT 219          
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX1_MOUSE (Interferon-induced GTP-binding protein Mx1 OS=Mus musculus GN=Mx1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 5.314e-28
Identity = 71/172 (41.28%), Postives = 109/172 (63.37%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLP-KKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGT--NALDILEGRSYP 744
            SGIVTR PLVL+L K + G +   +  +   + + +D S V + I +  + + G    IS   I L + SPNV +LTLIDLPGIT+VAV  QP  +  +I+ ++++YI+K   + L + P+N D+AT++A+ +++EVDP G+RT GVLT  DL+D+G     LD++    YP
Sbjct:   65 SGIVTRCPLVLKLRKLKEGEEWRGKVSYDDIEVELSDPSEVEEAINKGQNFIAGVGLGISDKLISLDVSSPNVPDLTLIDLPGITRVAVGNQPADIGRQIKRLIKTYIQKQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGVLTKPDLVDRGAEGKVLDVMRNLVYP 236          
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX1_RAT (Interferon-induced GTP-binding protein Mx1 OS=Rattus norvegicus GN=Mx1 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 9.064e-28
Identity = 66/158 (41.77%), Postives = 107/158 (67.72%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTEPGLQEYAEFLHLPKK-KFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGT 708
            SGIVTR PLVL+L + + G +   + ++   + + +  S+V +EI +  + + G+  +IS   I L + SP+V +LTLIDLPGIT+VAV  QP  +  +I+ ++  YI+K   + L + P+N D+AT++A+K+++EVDP G+RT G+LT  DL+D+GT
Sbjct:   90 SGIVTRCPLVLKLKQLKQGEKWSGKVIYKDTEIEISHPSLVEREINKAQNLIAGEGLKISSDLISLEVSSPHVPDLTLIDLPGITRVAVGDQPADIEHKIKRLITEYIQKQETINLVVVPSNVDIATTEALKMAQEVDPQGDRTIGILTKPDLVDRGT 247          
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX1_PONAB (Interferon-induced GTP-binding protein Mx1 OS=Pongo abelii GN=MX1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 70/162 (43.21%), Postives = 104/162 (64.20%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTEP-----GLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGT 708
            SGIVTR PLVL+L K        G   Y ++    + + +D S V KEI +  + + G+   IS   I L I S +V +LTLIDLPGIT+VAV  QP  +  +I+T+++ YI++   + L + P+N D+AT++A+ +++EVDP G+RT G+LT  DL+DKGT
Sbjct:   99 SGIVTRCPLVLKLKKLVNEDKWRGKVSYQDY----EIEISDASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGT 256          
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX1_MACMU (Interferon-induced GTP-binding protein Mx1 OS=Macaca mulatta GN=MX1 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 71/162 (43.83%), Postives = 103/162 (63.58%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTEP-----GLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGT 708
            SGIVTR PLVL+L K        G   Y ++    + +  D S V KEI +  + + G+   IS   I L I S +V +LTLIDLPGIT+VAV  QP  +  +I+T++R YI++   + L + P+N D+AT++A+ +++EVDP G+RT G+LT  DL+DKGT
Sbjct:   99 SGIVTRCPLVLKLKKLVNEDEWRGKVSYQDY----EIEILDASEVEKEINKAQNTIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPPDIGYKIKTLIRKYIQRQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGT 256          
BLAST of EY649777 vs. ExPASy Swiss-Prot
Match: MX1_HUMAN (Interferon-induced GTP-binding protein Mx1 OS=Homo sapiens GN=MX1 PE=1 SV=4)

HSP 1 Score: 123.25 bits (308), Expect = 2.019e-27
Identity = 70/162 (43.21%), Postives = 104/162 (64.20%), Query Frame = 1
Query:  238 SGIVTRRPLVLQLHKTEP-----GLQEYAEFLHLPKKKFTDFSMVRKEIQEETDRVTGKSKQISPVPIHLSIYSPNVVNLTLIDLPGITKVAVEGQPESVVLEIETMVRSYIEKPNCLILAITPANQDLATSDAVKLSREVDPTGERTFGVLT*LDLMDKGT 708
            SGIVTR PLVL+L K        G   Y ++    + + +D S V KEI +  + + G+   IS   I L I S +V +LTLIDLPGIT+VAV  QP  +  +I+T+++ YI++   + L + P+N D+AT++A+ +++EVDP G+RT G+LT  DL+DKGT
Sbjct:   99 SGIVTRCPLVLKLKKLVNEDKWRGKVSYQDY----EIEISDASEVEKEINKAQNAIAGEGMGISHELITLEISSRDVPDLTLIDLPGITRVAVGNQPADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGT 256          
The following BLAST results are available for this feature:
BLAST of EY649777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
MX2_SHEEP8.198e-2942.05Interferon-induced GTP-binding protein Mx2 OS=Ovis... [more]
MX2_PIG8.198e-2940.59Interferon-induced GTP-binding protein Mx2 OS=Sus ... [more]
MX2_HUMAN1.398e-2840.35Interferon-induced GTP-binding protein Mx2 OS=Homo... [more]
MX2_BOVIN3.115e-2841.18Interferon-induced GTP-binding protein Mx2 OS=Bos ... [more]
MX_SINCH4.069e-2843.04Interferon-induced GTP-binding protein Mx OS=Sinip... [more]
MX1_MOUSE5.314e-2841.28Interferon-induced GTP-binding protein Mx1 OS=Mus ... [more]
MX1_RAT9.064e-2841.77Interferon-induced GTP-binding protein Mx1 OS=Ratt... [more]
MX1_PONAB2.019e-2743.21Interferon-induced GTP-binding protein Mx1 OS=Pong... [more]
MX1_MACMU2.019e-2743.83Interferon-induced GTP-binding protein Mx1 OS=Maca... [more]
MX1_HUMAN2.019e-2743.21Interferon-induced GTP-binding protein Mx1 OS=Homo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-D06-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649777 ID=EY649777; Name=EY649777; organism=Citrus sinensis; type=EST; length=921bp
CCCACGCGTCCGGATCAAACTCTTTAAGTCAATAGCTTCGGAGAATTGAA
CAAGTGAACTCAATTAAAAGATGTCTAAATCAAAAGTTACATTAGTTGAA
TTCCTGCTTCGTTTTAGGAAAACTGGAACTAAAGCATATCATAATCAAAA
GATTTTAAGTGATCTTGGAAAATTTATGTGCATGCAAATGAAGAAAATAA
CTTATAATTTTTGGTTCTGAAGTATTTTGTGTAATTTTCAGGTATTGTGA
CAAGGAGGCCTTTGGTGCTGCAATTGCACAAGACAGAGCCTGGGCTACAG
GAGTATGCAGAGTTCCTTCACTTGCCAAAGAAAAAGTTCACCGATTTCTC
TATGGTTCGGAAAGAAATTCAAGAAGAAACTGATAGAGTAACTGGGAAAT
CAAAACAAATTTCTCCAGTTCCCATCCATCTTAGTATCTATTCCCCAAAT
GTGGTCAACTTAACACTCATAGATTTGCCGGGTATAACAAAGGTTGCTGT
AGAGGGGCAGCCAGAGAGTGTCGTCCTGGAGATAGAGACAATGGTTCGTT
CGTATATTGAGAAGCCAAACTGCCTCATTTTGGCCATAACTCCAGCCAAT
CAAGATCTGGCAACATCAGATGCTGTCAAACTCTCTAGAGAAGTTGATCC
AACTGGTGAGAGGACATTTGGTGTGTTGACATAGCTTGATTTGATGGACA
AAGGAACAAATGCTTTGGATATTCTTGAAGGGCGTTCTTATCCACTTCAC
ACCCTTGGGTTGGGATTGTGAACCGTTCACAGCTGTATCATAAAAATGTG
GATATGATTGCTGCTCGACGAAGGAGCATGAGTTTTTTGCCACAGTCCTG
ATATGGGACATTAGCCACAAAATTGGGGTCTGATATCTGCAAAGCTCTCT
CAAGCATTGGAGNCATATTAA
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