EY649770

Overview
NameEY649770
Unique NameEY649770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS2_ARATH (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana GN=DRT112 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.793e-31
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K VFKNNAG+PHNVVFDEDEIPSGVDV+KISM  +DLLNG GETY V LTE GTYSFYC+PHQGAGMVG+VTVN
Sbjct:   94 KIVFKNNAGYPHNVVFDEDEIPSGVDVAKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_VICFA (Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 4.954e-31
Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = 1
Query:    7 VFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            VFKNNAGFPHNVVFDEDEIPSGVD +KISM  EDLLN PGETY+V L  KGTY FYCSPHQGAGMVGQVTVN
Sbjct:   28 VFKNNAGFPHNVVFDEDEIPSGVDAAKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_SOLTU (Plastocyanin OS=Solanum tuberosum GN=PETE PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 4.954e-31
Identity = 61/74 (82.43%), Postives = 68/74 (91.89%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHNVVFDEDEIP+GVD SKISM+ EDLLN  GETY+VTL+EKGTY+FYC+PHQGAGMVG+VTVN
Sbjct:   26 KITFKNNAGFPHNVVFDEDEIPAGVDASKISMAEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_PEA (Plastocyanin, chloroplastic OS=Pisum sativum GN=PETE PE=4 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 4.954e-31
Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = 1
Query:    7 VFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            VFKNNAGFPHNVVFDEDEIP+GVD SKISM  EDLLN PGETY+V L  KGTY FYCSPHQGAGMVGQVTVN
Sbjct:   97 VFKNNAGFPHNVVFDEDEIPAGVDASKISMPEEDLLNAPGETYSVKLDAKGTYKFYCSPHQGAGMVGQVTVN 168          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_SILPR (Plastocyanin, chloroplastic OS=Silene pratensis GN=PETE PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.104e-30
Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHNVVFDEDE+P+GVDV+KISM  EDLLN PGE Y+VTLTEKGTY FYC+PH GAGMVG+VTVN
Sbjct:   92 KITFKNNAGFPHNVVFDEDEVPAGVDVTKISMPEEDLLNAPGEEYSVTLTEKGTYKFYCAPHAGAGMVGKVTVN 165          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_PHAVU (Plastocyanin OS=Phaseolus vulgaris GN=PETE PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.104e-30
Identity = 62/74 (83.78%), Postives = 65/74 (87.84%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K VFKNNAGFPHNVVFDEDEIP+GVD  KISM  E+LLN PGETY VTL  KGTYSFYCSPHQGAGMVG+VTVN
Sbjct:   26 KIVFKNNAGFPHNVVFDEDEIPAGVDAVKISMPEEELLNAPGETYVVTLDTKGTYSFYCSPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_CAPBU (Plastocyanin OS=Capsella bursa-pastoris GN=PETE PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.883e-30
Identity = 62/74 (83.78%), Postives = 64/74 (86.49%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K VFKNNAGFPHNVVFDEDEIPSGVD SKISM   DLLN  GETY V LTE GTYSFYC+PHQGAGMVG+VTVN
Sbjct:   26 KIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDENDLLNAAGETYEVALTEAGTYSFYCAPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_CUCSA (Plastocyanin OS=Cucumis sativus GN=PETE PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.459e-30
Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHNVVFDEDEIPSGVD  KISM+ EDLL+ PG+ Y V LT+KG+YSFYCSPHQGAGMVG+VTVN
Sbjct:   26 KITFKNNAGFPHNVVFDEDEIPSGVDSGKISMNEEDLLBAPGZVYZVZLTZKGSYSFYCSPHQGAGMVGKVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS1_POPNI (Plastocyanin A, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.220e-29
Identity = 60/74 (81.08%), Postives = 64/74 (86.49%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K VFKNNAGFPHN+VFDED IPSGVD SKISMS EDLLN  GET+ V L+ KG YSFYCSPHQGAGMVG+VTVN
Sbjct:   95 KIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_FRIAG (Plastocyanin, chloroplastic OS=Fritillaria agrestis GN=PETE PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.637e-29
Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 1
Query:    7 VFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            VFKNNAGFPHNV+FDEDE+P GVD   ISM  EDLLN PGET++VTL EKGTYS YCSPHQGAGM G++TVN
Sbjct:   95 VFKNNAGFPHNVLFDEDEVPKGVDAGAISMKEEDLLNAPGETFSVTLKEKGTYSIYCSPHQGAGMAGKITVN 166          
The following BLAST results are available for this feature:
BLAST of EY649770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PLAS2_ARATH3.793e-3183.78Plastocyanin major isoform, chloroplastic OS=Arabi... [more]
PLAS_VICFA4.954e-3186.11Plastocyanin OS=Vicia faba GN=PETE PE=1 SV=1[more]
PLAS_SOLTU4.954e-3182.43Plastocyanin OS=Solanum tuberosum GN=PETE PE=1 SV=... [more]
PLAS_PEA4.954e-3186.11Plastocyanin, chloroplastic OS=Pisum sativum GN=PE... [more]
PLAS_SILPR1.104e-3081.08Plastocyanin, chloroplastic OS=Silene pratensis GN... [more]
PLAS_PHAVU1.104e-3083.78Plastocyanin OS=Phaseolus vulgaris GN=PETE PE=1 SV... [more]
PLAS_CAPBU1.883e-3083.78Plastocyanin OS=Capsella bursa-pastoris GN=PETE PE... [more]
PLAS_CUCSA2.459e-3079.73Plastocyanin OS=Cucumis sativus GN=PETE PE=1 SV=1[more]
PLAS1_POPNI1.220e-2981.08Plastocyanin A, chloroplastic OS=Populus nigra GN=... [more]
PLAS_FRIAG4.637e-2977.78Plastocyanin, chloroplastic OS=Fritillaria agresti... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649770 ID=EY649770; Name=EY649770; organism=Citrus sinensis; type=EST; length=418bp
AAAGATGTGTTCAAGAACAATGCTGGGTTCCCACACAACGTTGTTTTCGA
TGAAGATGAGATTCCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTA
CAGAAGACCTTCTCAATGGTCCTGGAGAGACTTATGCTGTTACTCTGACT
GAAAAAGGCACTTACTCTTTCTACTGTTCCCCTCACCAAGGAGCTGGCAT
GGTTGGACAAGTGACTGTTAATTAAGTTCACATTCAGACTTTGTTTGCCT
CATCTCATTGGTTATCGTTCTCTTCTTTTTGCATTTTATGAGTATCATAC
ATATTTTCATTTGGTGAGAGAGAATGTTATGTGGTGAGACACTTCAACCA
AGCCAATAAACCTCTGTATTTTCCATTTATTTCAAATGCAGATTTGTGAT
GTAAAAAAAAAAAAAAAA
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