EY649770

Overview
NameEY649770
Unique NameEY649770
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS2_POPNI (Plastocyanin B, chloroplastic OS=Populus nigra GN=PETE PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 7.910e-29
Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K VFKNNAGFPHNV+FDED +PSGVDVSKISMS EDLLN  GET+ V L++KG Y+FYCSPHQGAGMVG+V VN
Sbjct:   95 KIVFKNNAGFPHNVLFDEDAVPSGVDVSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS1_ARATH (Plastocyanin minor isoform, chloroplastic OS=Arabidopsis thaliana GN=PETE PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.033e-28
Identity = 59/73 (80.82%), Postives = 63/73 (86.30%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            K VFKNNAGFPHNVVFDEDEIPSGVD SKISM    LLNG GETY VTLTE G+Y FYC+PHQGAGMVG++TV
Sbjct:   98 KIVFKNNAGFPHNVVFDEDEIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_GINBI (Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.492e-27
Identity = 55/72 (76.39%), Postives = 61/72 (84.72%), Query Frame = 1
Query:    7 VFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            VFKNNAGFPHNV+FDED +P+GVDVS ISMS EDLLN PGETY V L +KGTY F+C+PHQG GM G VTVN
Sbjct:   28 VFKNNAGFPHNVIFDEDAVPAGVDVSSISMSEEDLLNAPGETYVVKLDKKGTYRFFCAPHQGIGMSGIVTVN 99          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSJ (Plastocyanin, chloroplastic OS=Oryza sativa subsp. japonica GN=PETE PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.674e-26
Identity = 55/71 (77.46%), Postives = 60/71 (84.51%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            FKNNAGFPHNVVFDED +PSGVDVSKIS   E+ LN PGET++VTLT  GTY FYC PH GAGMVG+VTVN
Sbjct:   86 FKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_ORYSI (Plastocyanin, chloroplastic OS=Oryza sativa subsp. indica GN=PETE PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.674e-26
Identity = 55/71 (77.46%), Postives = 60/71 (84.51%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            FKNNAGFPHNVVFDED +PSGVDVSKIS   E+ LN PGET++VTLT  GTY FYC PH GAGMVG+VTVN
Sbjct:   86 FKNNAGFPHNVVFDEDAVPSGVDVSKISQ--EEYLNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 154          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_DAUCA (Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.069e-25
Identity = 53/70 (75.71%), Postives = 60/70 (85.71%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            FKNNAGFPHN+VFDEDE+P+GVDVSKIS   ED L+G GE++ VTLTEKGTY FYC PH GAGM G+VTV
Sbjct:   29 FKNNAGFPHNIVFDEDEVPAGVDVSKISQ--EDYLDGAGESFTVTLTEKGTYKFYCEPHAGAGMKGEVTV 96          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_PETCR (Plastocyanin A/B OS=Petroselinum crispum GN=PETE PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.382e-25
Identity = 53/74 (71.62%), Postives = 59/74 (79.73%), Query Frame = 1
Query:    1 KDVFKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            K  FKNNAGFPHN+VFDEDE+P+GV+  KIS    + LNG GETY VTLTEKGTY FYC PH GAGM G+VTVN
Sbjct:   26 KITFKNNAGFPHNIVFDEDEVPAGVNAEKISQP--EYLNGAGETYEVTLTEKGTYKFYCEPHAGAGMKGEVTVN 97          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_HORVU (Plastocyanin, chloroplastic OS=Hordeum vulgare GN=PETE PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.062e-25
Identity = 53/71 (74.65%), Postives = 59/71 (83.10%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            FKNNAG+PHNVVFDED +PSGVDVSKIS   E+ L  PGET++VTLT  GTY FYC PH GAGMVG+VTVN
Sbjct:   87 FKNNAGYPHNVVFDEDAVPSGVDVSKISQ--EEYLTAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN 155          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_CHLRE (Plastocyanin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETE PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.559e-21
Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTV 219
            F NNAGFPHN+VFDED IPSGV+   IS   +D LN PGETY+V LT  G Y +YC PHQGAGMVG++ V
Sbjct:   77 FVNNAGFPHNIVFDEDAIPSGVNADAISR--DDYLNAPGETYSVKLTAAGEYGYYCEPHQGAGMVGKIIV 144          
BLAST of EY649770 vs. ExPASy Swiss-Prot
Match: PLAS_PHYPA (Plastocyanin, chloroplastic OS=Physcomitrella patens GN=PETE PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.550e-19
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 1
Query:   10 FKNNAGFPHNVVFDEDEIPSGVDVSKISMSTEDLLNGPGETYAVTLTEKGTYSFYCSPHQGAGMVGQVTVN 222
            F NN GFPHNVVFDED +P+GV    I+   ED LNGP E++++T    GTY FYC PHQGAGM G VTV+
Sbjct:  100 FVNNKGFPHNVVFDEDAVPAGVKTEDINH--EDYLNGPNESFSITFKTPGTYEFYCEPHQGAGMKGVVTVS 168          
The following BLAST results are available for this feature:
BLAST of EY649770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PLAS2_POPNI7.910e-2978.38Plastocyanin B, chloroplastic OS=Populus nigra GN=... [more]
PLAS1_ARATH1.033e-2880.82Plastocyanin minor isoform, chloroplastic OS=Arabi... [more]
PLAS_GINBI1.492e-2776.39Plastocyanin OS=Ginkgo biloba GN=PETE PE=1 SV=1[more]
PLAS_ORYSJ3.674e-2677.46Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_ORYSI3.674e-2677.46Plastocyanin, chloroplastic OS=Oryza sativa subsp.... [more]
PLAS_DAUCA1.069e-2575.71Plastocyanin OS=Daucus carota GN=PETE PE=1 SV=1[more]
PLAS_PETCR2.382e-2571.62Plastocyanin A/B OS=Petroselinum crispum GN=PETE P... [more]
PLAS_HORVU4.062e-2574.65Plastocyanin, chloroplastic OS=Hordeum vulgare GN=... [more]
PLAS_CHLRE3.559e-2165.71Plastocyanin, chloroplastic OS=Chlamydomonas reinh... [more]
PLAS_PHYPA2.550e-1960.56Plastocyanin, chloroplastic OS=Physcomitrella pate... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-003-C11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649770 ID=EY649770; Name=EY649770; organism=Citrus sinensis; type=EST; length=418bp
AAAGATGTGTTCAAGAACAATGCTGGGTTCCCACACAACGTTGTTTTCGA
TGAAGATGAGATTCCGAGTGGTGTTGATGTTTCAAAAATCTCCATGTCTA
CAGAAGACCTTCTCAATGGTCCTGGAGAGACTTATGCTGTTACTCTGACT
GAAAAAGGCACTTACTCTTTCTACTGTTCCCCTCACCAAGGAGCTGGCAT
GGTTGGACAAGTGACTGTTAATTAAGTTCACATTCAGACTTTGTTTGCCT
CATCTCATTGGTTATCGTTCTCTTCTTTTTGCATTTTATGAGTATCATAC
ATATTTTCATTTGGTGAGAGAGAATGTTATGTGGTGAGACACTTCAACCA
AGCCAATAAACCTCTGTATTTTCCATTTATTTCAAATGCAGATTTGTGAT
GTAAAAAAAAAAAAAAAA
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